RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460		F8W031	263 aa	Predicted RBP	20.74	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	FKBP1A	P62942	108 aa	Known RBP	20.74	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	MKRN3	Q13064	507 aa	Known RBP	20.74	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	SLC4A10	Q6U841	1118 aa		20.74	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	CTU1	Q7Z7A3	348 aa	Known RBP	20.74	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	PRMT6	Q96LA8	375 aa	Predicted RBP	20.74	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	PAPPA2	Q9BXP8	1791 aa		20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	TAF7L	Q5H9L4	462 aa		20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	KAZALD1	Q96I82	304 aa		20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	SRCIN1	Q9C0H9	1055 aa		20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	CNNM1	Q9NRU3	951 aa		20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	ANGEL1	Q9UNK9	670 aa	Known RBP	20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	FZD1	Q9UP38	647 aa		20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	JAG2	Q9Y219	1238 aa		20.73	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	CFAP100	Q494V2	611 aa		20.72	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	SUCLG2	Q96I99	432 aa		20.72	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	PUS3	Q9BZE2	481 aa	Known RBP	20.72	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	SPRYD7	Q5W111	196 aa		20.71	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	ZNF296	Q8WUU4	475 aa	Predicted RBP	20.71	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	AOX1	Q06278	1338 aa		20.71	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	MYH3	P11055	1940 aa		20.7	■□□□□ 0.91
PRKAR1A-206	ENST00000585460	CLRN2	A0PK11	232 aa		20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	SPDYE2B	A6NHP3	402 aa		20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	NBPF7	P0C2Y1	421 aa	Predicted RBP	20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	SPDYE6	P0CI01	402 aa		20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	UBE4A	Q14139	1066 aa		20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	TDRD7	Q8NHU6	1098 aa	Known RBP	20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	SLC10A4	Q96EP9	437 aa		20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	FAM84B	Q96KN1	310 aa	Predicted RBP	20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	R3HDML	Q9H3Y0	253 aa		20.7	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	GPR25	O00155	361 aa		20.69	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	MAP3K11	Q16584	847 aa		20.69	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	RIPOR2	Q9Y4F9	1068 aa		20.69	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	FAM205A	Q6ZU69	1335 aa		20.69	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	ZNF521	Q96K83	1311 aa		20.69	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	HIBADH	P31937	336 aa	Known RBP	20.68	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	GYG1	P46976	350 aa		20.68	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	SREBF2	Q12772	1141 aa		20.68	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	NOM1	Q5C9Z4	860 aa	Known RBP	20.68	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	PPP2R3B	Q9Y5P8	575 aa		20.68	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	SPEF2	Q9C093	1822 aa		20.68	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	UTY	O14607	1347 aa		20.68	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	ZNF646	O15015	1829 aa	Predicted RBP	20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	MYO1B	O43795	1136 aa		20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	RBM5	P52756	815 aa	Known RBP eCLIP	20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	SOX10	P56693	466 aa		20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	SUPT20HL1	Q3ZLR7	823 aa		20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	NBPF12	Q5TAG4	269 aa	Predicted RBP	20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	MRPL50	Q8N5N7	158 aa	Known RBP	20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	CLMN	Q96JQ2	1002 aa		20.67	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	PPP1R12B	O60237	982 aa	Predicted RBP	20.66	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	PKN2	Q16513	984 aa	Known RBP	20.66	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	CFHR5	Q9BXR6	569 aa		20.66	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	VEZT	Q9HBM0	779 aa		20.66	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	20.66	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	HPS5	Q9UPZ3	1129 aa		20.66	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	USP2	O75604	605 aa	Predicted RBP	20.65	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	INHBE	P58166	350 aa		20.65	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	RASA3	Q14644	834 aa		20.65	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	RABL6	Q3YEC7	729 aa	Predicted RBP	20.65	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	MFSD14B	Q5SR56	506 aa		20.65	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	FBXO33	Q7Z6M2	555 aa		20.65	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	BICC1	Q9H694	974 aa	Known RBP	20.65	■□□□□ 0.9
PRKAR1A-206	ENST00000585460	UNCX	A6NJT0	531 aa		20.64	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	ANKRD44	Q8N8A2	993 aa		20.64	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	ZNF70	Q9UC06	446 aa	Predicted RBP	20.64	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	TTF2	Q9UNY4	1162 aa	Known RBP	20.64	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	COL1A1	P02452	1464 aa	Predicted RBP	20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	MROH5	Q6ZUA9	1318 aa		20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	MANSC4	A6NHS7	340 aa	Predicted RBP	20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	FKTN	O75072	461 aa		20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	LRRC24	Q50LG9	513 aa		20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	IFNL1	Q8IU54	200 aa		20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	WNK4	Q96J92	1243 aa		20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	TDRD3	Q9H7E2	651 aa	Known RBP	20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	SERPINA10	Q9UK55	444 aa		20.63	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	ALDH1A1	P00352	501 aa		20.62	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	ZBTB48	P10074	688 aa	Predicted RBP	20.62	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	GRIK5	Q16478	980 aa		20.62	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	SPDYE2	Q495Y8	402 aa		20.62	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	CACNA1F	O60840	1977 aa		20.62	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	SSC5D	A1L4H1	1573 aa		20.62	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	AKAP11	Q9UKA4	1901 aa		20.61	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	GJA5	P36382	358 aa		20.61	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	DZIP1L	Q8IYY4	767 aa	Known RBP	20.61	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	SSH1	Q8WYL5	1049 aa		20.61	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	USP44	Q9H0E7	712 aa		20.61	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	IGF2BP3	O00425	579 aa	Known RBP eCLIP	20.6	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	IREB2	P48200	963 aa	Known RBP	20.6	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	METTL24	Q5JXM2	366 aa		20.6	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	TEPSIN	Q96N21	525 aa		20.6	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	20.6	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	PDE8B	O95263	885 aa		20.59	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	CRK	P46108	304 aa		20.59	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	FBXO46	Q6PJ61	603 aa	Predicted RBP	20.59	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	VGLL2	Q8N8G2	317 aa		20.59	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	KLHDC4	Q8TBB5	520 aa		20.59	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	PTPRC	P08575	1304 aa		20.58	■□□□□ 0.89
PRKAR1A-206	ENST00000585460		E9PSI1	815 aa		20.58	■□□□□ 0.89
PRKAR1A-206	ENST00000585460	BCAM	P50895	628 aa		20.58	■□□□□ 0.89

Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms