RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 EXOSC9Q06265 439 aaKnown RBP18.43■□□□□ 0.54
SDF2-202ENST00000585428 SREBF2Q12772 1141 aa18.43■□□□□ 0.54
SDF2-202ENST00000585428 MKRN3Q13064 507 aaKnown RBP18.43■□□□□ 0.54
SDF2-202ENST00000585428 PRKG1Q13976 671 aa18.43■□□□□ 0.54
SDF2-202ENST00000585428 R3HDMLQ9H3Y0 253 aa18.43■□□□□ 0.54
SDF2-202ENST00000585428 F6X3S4 739 aa18.42■□□□□ 0.54
SDF2-202ENST00000585428 EPHA10Q5JZY3 1008 aa18.42■□□□□ 0.54
SDF2-202ENST00000585428 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
SDF2-202ENST00000585428 PCDHAC2Q9Y5I4 1007 aa18.42■□□□□ 0.54
SDF2-202ENST00000585428 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
SDF2-202ENST00000585428 ZNF646O15015 1829 aaPredicted RBP18.42■□□□□ 0.54
SDF2-202ENST00000585428 INHBEP58166 350 aa18.41■□□□□ 0.54
SDF2-202ENST00000585428 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
SDF2-202ENST00000585428 SLC10A4Q96EP9 437 aa18.41■□□□□ 0.54
SDF2-202ENST00000585428 PRMT6Q96LA8 375 aaPredicted RBP18.41■□□□□ 0.54
SDF2-202ENST00000585428 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
SDF2-202ENST00000585428 FZD1Q9UP38 647 aa18.41■□□□□ 0.54
SDF2-202ENST00000585428 UNCXA6NJT0 531 aa18.4■□□□□ 0.54
SDF2-202ENST00000585428 SALL2Q9Y467 1007 aaPredicted RBP18.4■□□□□ 0.54
SDF2-202ENST00000585428 PPP2R3BQ9Y5P8 575 aa18.4■□□□□ 0.54
SDF2-202ENST00000585428 MYH3P11055 1940 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 SPDYE2BA6NHP3 402 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 FKTNO75072 461 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 SPDYE6P0CI01 402 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 CCDC57Q2TAC2 916 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 CFAP100Q494V2 611 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 LDHAL6AQ6ZMR3 332 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 ZNF804AQ7Z570 1209 aa18.39■□□□□ 0.53
SDF2-202ENST00000585428 ZNF594Q96JF6 807 aaPredicted RBP18.39■□□□□ 0.53
SDF2-202ENST00000585428 MANSC4A6NHS7 340 aaPredicted RBP18.38■□□□□ 0.53
SDF2-202ENST00000585428 GRM8O00222 908 aa18.38■□□□□ 0.53
SDF2-202ENST00000585428 PPP1R12BO60237 982 aaPredicted RBP18.38■□□□□ 0.53
SDF2-202ENST00000585428 ALDH1A1P00352 501 aa18.38■□□□□ 0.53
SDF2-202ENST00000585428 SUPT20HL1Q3ZLR7 823 aa18.38■□□□□ 0.53
SDF2-202ENST00000585428 FBXO46Q6PJ61 603 aaPredicted RBP18.38■□□□□ 0.53
SDF2-202ENST00000585428 IFNL1Q8IU54 200 aa18.38■□□□□ 0.53
SDF2-202ENST00000585428 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
SDF2-202ENST00000585428 F8W031 263 aaPredicted RBP18.37■□□□□ 0.53
SDF2-202ENST00000585428 USP2O75604 605 aaPredicted RBP18.37■□□□□ 0.53
SDF2-202ENST00000585428 ZBTB48P10074 688 aaPredicted RBP18.37■□□□□ 0.53
SDF2-202ENST00000585428 HOXD11P31277 338 aaPredicted RBP18.37■□□□□ 0.53
SDF2-202ENST00000585428 TDRD7Q8NHU6 1098 aaKnown RBP18.37■□□□□ 0.53
SDF2-202ENST00000585428 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
SDF2-202ENST00000585428 AOX1Q06278 1338 aa18.37■□□□□ 0.53
SDF2-202ENST00000585428 COL1A1P02452 1464 aaPredicted RBP18.37■□□□□ 0.53
SDF2-202ENST00000585428 MYO1BO43795 1136 aa18.36■□□□□ 0.53
SDF2-202ENST00000585428 PLIN1O60240 522 aa18.36■□□□□ 0.53
SDF2-202ENST00000585428 NBPF12Q5TAG4 269 aaPredicted RBP18.36■□□□□ 0.53
SDF2-202ENST00000585428 FAM205AQ6ZU69 1335 aa18.36■□□□□ 0.53
SDF2-202ENST00000585428 CLMNQ96JQ2 1002 aa18.36■□□□□ 0.53
SDF2-202ENST00000585428 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
SDF2-202ENST00000585428 CLRN2A0PK11 232 aa18.35■□□□□ 0.53
SDF2-202ENST00000585428 ALDH1L1O75891 902 aa18.35■□□□□ 0.53
SDF2-202ENST00000585428 UBE4AQ14139 1066 aa18.35■□□□□ 0.53
SDF2-202ENST00000585428 KAZALD1Q96I82 304 aa18.35■□□□□ 0.53
SDF2-202ENST00000585428 WNK4Q96J92 1243 aa18.35■□□□□ 0.53
SDF2-202ENST00000585428 FAM84BQ96KN1 310 aaPredicted RBP18.35■□□□□ 0.53
SDF2-202ENST00000585428 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
SDF2-202ENST00000585428 JAG2Q9Y219 1238 aa18.35■□□□□ 0.53
SDF2-202ENST00000585428 RASA3Q14644 834 aa18.34■□□□□ 0.53
SDF2-202ENST00000585428 CNNM1Q9NRU3 951 aa18.34■□□□□ 0.53
SDF2-202ENST00000585428 RIPOR2Q9Y4F9 1068 aa18.34■□□□□ 0.53
SDF2-202ENST00000585428 SSC5DA1L4H1 1573 aa18.34■□□□□ 0.53
SDF2-202ENST00000585428 IGF2BP3O00425 579 aaKnown RBP eCLIP18.33■□□□□ 0.52
SDF2-202ENST00000585428 HIBADHP31937 336 aaKnown RBP18.33■□□□□ 0.52
SDF2-202ENST00000585428 GJA5P36382 358 aa18.33■□□□□ 0.52
SDF2-202ENST00000585428 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.52
SDF2-202ENST00000585428 PUS3Q9BZE2 481 aaKnown RBP18.33■□□□□ 0.52
SDF2-202ENST00000585428 SERPINA10Q9UK55 444 aa18.33■□□□□ 0.52
SDF2-202ENST00000585428 TESPA1A2RU30 521 aaPredicted RBP18.32■□□□□ 0.52
SDF2-202ENST00000585428 GYG1P46976 350 aa18.32■□□□□ 0.52
SDF2-202ENST00000585428 IREB2P48200 963 aaKnown RBP18.32■□□□□ 0.52
SDF2-202ENST00000585428 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
SDF2-202ENST00000585428 PTPN18Q99952 460 aa18.32■□□□□ 0.52
SDF2-202ENST00000585428 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
SDF2-202ENST00000585428 VEZTQ9HBM0 779 aa18.32■□□□□ 0.52
SDF2-202ENST00000585428 ZNF70Q9UC06 446 aaPredicted RBP18.32■□□□□ 0.52
SDF2-202ENST00000585428 UTYO14607 1347 aa18.31■□□□□ 0.52
SDF2-202ENST00000585428 ANP32CO43423 234 aa18.31■□□□□ 0.52
SDF2-202ENST00000585428 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
SDF2-202ENST00000585428 SPDYE2Q495Y8 402 aa18.31■□□□□ 0.52
SDF2-202ENST00000585428 MFSD14BQ5SR56 506 aa18.31■□□□□ 0.52
SDF2-202ENST00000585428 ANKRD13AQ8IZ07 590 aa18.31■□□□□ 0.52
SDF2-202ENST00000585428 SUCLG2Q96I99 432 aa18.31■□□□□ 0.52
SDF2-202ENST00000585428 TEPSINQ96N21 525 aa18.31■□□□□ 0.52
SDF2-202ENST00000585428 TDRD3Q9H7E2 651 aaKnown RBP18.31■□□□□ 0.52
SDF2-202ENST00000585428 PRPF38BQ5VTL8 546 aaKnown RBP18.3■□□□□ 0.52
SDF2-202ENST00000585428 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
SDF2-202ENST00000585428 OTOP1Q7RTM1 612 aa18.3■□□□□ 0.52
SDF2-202ENST00000585428 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
SDF2-202ENST00000585428 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
SDF2-202ENST00000585428 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
SDF2-202ENST00000585428 PCDH10Q9P2E7 1040 aa18.3■□□□□ 0.52
SDF2-202ENST00000585428 TTF2Q9UNY4 1162 aaKnown RBP18.3■□□□□ 0.52
SDF2-202ENST00000585428 TNFAIP1Q13829 316 aa18.29■□□□□ 0.52
SDF2-202ENST00000585428 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
SDF2-202ENST00000585428 MS4A4AQ96JQ5 239 aa18.29■□□□□ 0.52
SDF2-202ENST00000585428 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
SDF2-202ENST00000585428 RABL6Q3YEC7 729 aaPredicted RBP18.28■□□□□ 0.52
SDF2-202ENST00000585428 TRIM17Q9Y577 477 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms