RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 ZNF804BA4D1E1 1349 aa29.07■■■□□ 2.24
LSM7-203ENST00000585409 SASH1O94885 1247 aa29.07■■■□□ 2.24
LSM7-203ENST00000585409 MS4A1P11836 297 aa29.07■■■□□ 2.24
LSM7-203ENST00000585409 IGHMBP2P38935 993 aaKnown RBP29.07■■■□□ 2.24
LSM7-203ENST00000585409 TTLL12Q14166 644 aaPredicted RBP29.07■■■□□ 2.24
LSM7-203ENST00000585409 GRM8O00222 908 aa29.06■■■□□ 2.24
LSM7-203ENST00000585409 KLRK1P26718 216 aa29.06■■■□□ 2.24
LSM7-203ENST00000585409 TTLL5Q6EMB2 1281 aa29.06■■■□□ 2.24
LSM7-203ENST00000585409 ZBED3Q96IU2 234 aaPredicted RBP29.06■■■□□ 2.24
LSM7-203ENST00000585409 ANKRD2Q9GZV1 360 aa29.06■■■□□ 2.24
LSM7-203ENST00000585409 ECM29Q5VYK3 1845 aa29.06■■■□□ 2.24
LSM7-203ENST00000585409 A0A1B0GUL6 1792 aa29.06■■■□□ 2.24
LSM7-203ENST00000585409 ITGA6P23229 1130 aa29.05■■■□□ 2.24
LSM7-203ENST00000585409 CASP7P55210 303 aa29.05■■■□□ 2.24
LSM7-203ENST00000585409 APOBEC3FQ8IUX4 373 aaKnown RBP29.05■■■□□ 2.24
LSM7-203ENST00000585409 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.05■■■□□ 2.24
LSM7-203ENST00000585409 HDAC9Q9UKV0 1011 aa29.05■■■□□ 2.24
LSM7-203ENST00000585409 HDAC5Q9UQL6 1122 aa29.05■■■□□ 2.24
LSM7-203ENST00000585409 LAMB1P07942 1786 aa29.05■■■□□ 2.24
LSM7-203ENST00000585409 CSF1RP07333 972 aa29.04■■■□□ 2.24
LSM7-203ENST00000585409 CFHR5Q9BXR6 569 aa29.04■■■□□ 2.24
LSM7-203ENST00000585409 GPR25O00155 361 aa29.03■■■□□ 2.24
LSM7-203ENST00000585409 PTPN12Q05209 780 aaKnown RBP29.03■■■□□ 2.24
LSM7-203ENST00000585409 KIAA0825Q8IV33 1275 aa29.03■■■□□ 2.24
LSM7-203ENST00000585409 FTSJ3Q8IY81 847 aaKnown RBP29.03■■■□□ 2.24
LSM7-203ENST00000585409 COL1A1P02452 1464 aaPredicted RBP29.03■■■□□ 2.24
LSM7-203ENST00000585409 TRIM27P14373 513 aa29.02■■■□□ 2.24
LSM7-203ENST00000585409 SREBF2Q12772 1141 aa29.02■■■□□ 2.24
LSM7-203ENST00000585409 LDLRAD1Q5T700 205 aa29.02■■■□□ 2.24
LSM7-203ENST00000585409 ARMC9Q7Z3E5 817 aa29.02■■■□□ 2.24
LSM7-203ENST00000585409 GTF2IP78347 998 aa29.01■■■□□ 2.23
LSM7-203ENST00000585409 MPHOSPH8Q99549 860 aa29.01■■■□□ 2.23
LSM7-203ENST00000585409 IRS2Q9Y4H2 1338 aa29■■■□□ 2.23
LSM7-203ENST00000585409 MKRN3Q13064 507 aaKnown RBP29■■■□□ 2.23
LSM7-203ENST00000585409 INTS3Q68E01 1043 aaKnown RBP28.99■■■□□ 2.23
LSM7-203ENST00000585409 CD209Q9NNX6 404 aa28.99■■■□□ 2.23
LSM7-203ENST00000585409 CHRNDQ07001 517 aa28.98■■■□□ 2.23
LSM7-203ENST00000585409 PRKG1Q13976 671 aa28.98■■■□□ 2.23
LSM7-203ENST00000585409 SPRYD7Q5W111 196 aa28.98■■■□□ 2.23
LSM7-203ENST00000585409 DZIP1LQ8IYY4 767 aaKnown RBP28.98■■■□□ 2.23
LSM7-203ENST00000585409 UTYO14607 1347 aa28.97■■■□□ 2.23
LSM7-203ENST00000585409 PRPF38BQ5VTL8 546 aaKnown RBP28.97■■■□□ 2.23
LSM7-203ENST00000585409 FBXO46Q6PJ61 603 aaPredicted RBP28.97■■■□□ 2.23
LSM7-203ENST00000585409 C15orf52Q6ZUT6 534 aaKnown RBP28.97■■■□□ 2.23
LSM7-203ENST00000585409 R3HDMLQ9H3Y0 253 aa28.97■■■□□ 2.23
LSM7-203ENST00000585409 CERS5Q8N5B7 392 aa28.96■■■□□ 2.23
LSM7-203ENST00000585409 MTMR14Q8NCE2 650 aa28.96■■■□□ 2.23
LSM7-203ENST00000585409 CLUAP1Q96AJ1 413 aa28.96■■■□□ 2.23
LSM7-203ENST00000585409 DEFB129Q9H1M3 183 aa28.96■■■□□ 2.23
LSM7-203ENST00000585409 ANGEL1Q9UNK9 670 aaKnown RBP28.96■■■□□ 2.23
LSM7-203ENST00000585409 SSC5DA1L4H1 1573 aa28.96■■■□□ 2.23
LSM7-203ENST00000585409 FKTNO75072 461 aa28.95■■■□□ 2.22
LSM7-203ENST00000585409 KCNJ4P48050 445 aa28.95■■■□□ 2.22
LSM7-203ENST00000585409 MAP3K11Q16584 847 aa28.95■■■□□ 2.22
LSM7-203ENST00000585409 DLGAP5Q15398 846 aa28.94■■■□□ 2.22
LSM7-203ENST00000585409 FZD1Q9UP38 647 aa28.94■■■□□ 2.22
LSM7-203ENST00000585409 ANKRD18BA2A2Z9 1011 aa28.93■■■□□ 2.22
LSM7-203ENST00000585409 GNAI3P08754 354 aa28.93■■■□□ 2.22
LSM7-203ENST00000585409 UBTFL1P0CB47 393 aaPredicted RBP28.93■■■□□ 2.22
LSM7-203ENST00000585409 USP44Q9H0E7 712 aa28.93■■■□□ 2.22
LSM7-203ENST00000585409 SNAP23O00161 211 aa28.92■■■□□ 2.22
LSM7-203ENST00000585409 ALDH1A1P00352 501 aa28.92■■■□□ 2.22
LSM7-203ENST00000585409 PPP2R3BQ9Y5P8 575 aa28.92■■■□□ 2.22
LSM7-203ENST00000585409 MANSC4A6NHS7 340 aaPredicted RBP28.91■■■□□ 2.22
LSM7-203ENST00000585409 NBPF7P0C2Y1 421 aaPredicted RBP28.91■■■□□ 2.22
LSM7-203ENST00000585409 IL1R1P14778 569 aa28.91■■■□□ 2.22
LSM7-203ENST00000585409 INHBEP58166 350 aa28.91■■■□□ 2.22
LSM7-203ENST00000585409 FOXO4P98177 505 aa28.91■■■□□ 2.22
LSM7-203ENST00000585409 TAF5LO75529 589 aa28.9■■■□□ 2.22
LSM7-203ENST00000585409 ZBTB48P10074 688 aaPredicted RBP28.9■■■□□ 2.22
LSM7-203ENST00000585409 SLC10A4Q96EP9 437 aa28.9■■■□□ 2.22
LSM7-203ENST00000585409 PCDHAC2Q9Y5I4 1007 aa28.9■■■□□ 2.22
LSM7-203ENST00000585409 HTTP42858 3142 aa28.89■■■□□ 2.22
LSM7-203ENST00000585409 UNCXA6NJT0 531 aa28.89■■■□□ 2.22
LSM7-203ENST00000585409 FKBP1AP62942 108 aaKnown RBP28.89■■■□□ 2.22
LSM7-203ENST00000585409 IFNL1Q8IU54 200 aa28.89■■■□□ 2.22
LSM7-203ENST00000585409 TMEM57Q8N5G2 664 aa28.89■■■□□ 2.22
LSM7-203ENST00000585409 HELBQ8NG08 1087 aaPredicted RBP28.89■■■□□ 2.22
LSM7-203ENST00000585409 CHMP4BQ9H444 224 aaKnown RBP28.89■■■□□ 2.22
LSM7-203ENST00000585409 CHMP3Q9Y3E7 222 aa28.89■■■□□ 2.22
LSM7-203ENST00000585409 IFIT5Q13325 482 aaKnown RBP28.88■■■□□ 2.21
LSM7-203ENST00000585409 ITPRIPQ8IWB1 547 aa28.88■■■□□ 2.21
LSM7-203ENST00000585409 SUCLG2Q96I99 432 aa28.88■■■□□ 2.21
LSM7-203ENST00000585409 CLMNQ96JQ2 1002 aa28.88■■■□□ 2.21
LSM7-203ENST00000585409 SPDYE2BA6NHP3 402 aa28.87■■■□□ 2.21
LSM7-203ENST00000585409 SPDYE6P0CI01 402 aa28.87■■■□□ 2.21
LSM7-203ENST00000585409 CFAP100Q494V2 611 aa28.87■■■□□ 2.21
LSM7-203ENST00000585409 ZNF804AQ7Z570 1209 aa28.87■■■□□ 2.21
LSM7-203ENST00000585409 WNK4Q96J92 1243 aa28.87■■■□□ 2.21
LSM7-203ENST00000585409 PPP1R12BO60237 982 aaPredicted RBP28.86■■■□□ 2.21
LSM7-203ENST00000585409 PDE3AQ14432 1141 aa28.86■■■□□ 2.21
LSM7-203ENST00000585409 CCDC57Q2TAC2 916 aa28.86■■■□□ 2.21
LSM7-203ENST00000585409 LMBR1LQ6UX01 489 aa28.86■■■□□ 2.21
LSM7-203ENST00000585409 PRMT6Q96LA8 375 aaPredicted RBP28.86■■■□□ 2.21
LSM7-203ENST00000585409 TNNQ9UQP3 1299 aa28.86■■■□□ 2.21
LSM7-203ENST00000585409 OTOFQ9HC10 1997 aa28.85■■■□□ 2.21
LSM7-203ENST00000585409 IGF2BP3O00425 579 aaKnown RBP eCLIP28.85■■■□□ 2.21
LSM7-203ENST00000585409 MYO1BO43795 1136 aa28.85■■■□□ 2.21
LSM7-203ENST00000585409 F8W031 263 aaPredicted RBP28.84■■■□□ 2.21
LSM7-203ENST00000585409 SUPT20HL1Q3ZLR7 823 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms