RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 METTL24Q5JXM2 366 aa21.51■■□□□ 1.03
ITGB4-213ENST00000584939 KLHDC4Q8TBB5 520 aa21.51■■□□□ 1.03
ITGB4-213ENST00000584939 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
ITGB4-213ENST00000584939 JAG2Q9Y219 1238 aa21.51■■□□□ 1.03
ITGB4-213ENST00000584939 F8W031 263 aaPredicted RBP21.5■■□□□ 1.03
ITGB4-213ENST00000584939 ZNF157P51786 506 aaPredicted RBP21.5■■□□□ 1.03
ITGB4-213ENST00000584939 FKBP1AP62942 108 aaKnown RBP21.5■■□□□ 1.03
ITGB4-213ENST00000584939 PRAMEF18Q5VWM3 479 aa21.5■■□□□ 1.03
ITGB4-213ENST00000584939 TDRD7Q8NHU6 1098 aaKnown RBP21.5■■□□□ 1.03
ITGB4-213ENST00000584939 CCDC102AQ96A19 550 aa21.5■■□□□ 1.03
ITGB4-213ENST00000584939 ZBED3Q96IU2 234 aaPredicted RBP21.5■■□□□ 1.03
ITGB4-213ENST00000584939 FAM84BQ96KN1 310 aaPredicted RBP21.5■■□□□ 1.03
ITGB4-213ENST00000584939 ZIC5Q96T25 663 aa21.5■■□□□ 1.03
ITGB4-213ENST00000584939 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
ITGB4-213ENST00000584939 FAM155AB1AL88 458 aaPredicted RBP21.49■■□□□ 1.03
ITGB4-213ENST00000584939 DLGAP5Q15398 846 aa21.49■■□□□ 1.03
ITGB4-213ENST00000584939 UBTFL1P0CB47 393 aaPredicted RBP21.48■■□□□ 1.03
ITGB4-213ENST00000584939 FKBP1BP68106 108 aa21.48■■□□□ 1.03
ITGB4-213ENST00000584939 FAM205AQ6ZU69 1335 aa21.48■■□□□ 1.03
ITGB4-213ENST00000584939 PDE8BO95263 885 aa21.47■■□□□ 1.03
ITGB4-213ENST00000584939 APOBEC3FQ8IUX4 373 aaKnown RBP21.47■■□□□ 1.03
ITGB4-213ENST00000584939 MTMR14Q8NCE2 650 aa21.47■■□□□ 1.03
ITGB4-213ENST00000584939 CAPN15O75808 1086 aa21.46■■□□□ 1.03
ITGB4-213ENST00000584939 RFX5P48382 616 aaPredicted RBP21.46■■□□□ 1.03
ITGB4-213ENST00000584939 FBXO33Q7Z6M2 555 aa21.46■■□□□ 1.03
ITGB4-213ENST00000584939 VPS37DQ86XT2 251 aa21.46■■□□□ 1.03
ITGB4-213ENST00000584939 VGLL2Q8N8G2 317 aa21.46■■□□□ 1.03
ITGB4-213ENST00000584939 TSKSQ9UJT2 592 aa21.46■■□□□ 1.03
ITGB4-213ENST00000584939 PCDHAC2Q9Y5I4 1007 aa21.46■■□□□ 1.03
ITGB4-213ENST00000584939 ZBED9Q6R2W3 1325 aa21.46■■□□□ 1.03
ITGB4-213ENST00000584939 CA12O43570 354 aa21.45■■□□□ 1.02
ITGB4-213ENST00000584939 CFAP100Q494V2 611 aa21.45■■□□□ 1.02
ITGB4-213ENST00000584939 MFSD14BQ5SR56 506 aa21.45■■□□□ 1.02
ITGB4-213ENST00000584939 MOB2Q70IA6 237 aa21.45■■□□□ 1.02
ITGB4-213ENST00000584939 ARHGAP45Q92619 1136 aa21.45■■□□□ 1.02
ITGB4-213ENST00000584939 KIF16BQ96L93 1317 aa21.45■■□□□ 1.02
ITGB4-213ENST00000584939 UBE2Q2LH0YL09 131 aa21.44■■□□□ 1.02
ITGB4-213ENST00000584939 EYA2O00167 538 aa21.44■■□□□ 1.02
ITGB4-213ENST00000584939 SLC10A3P09131 477 aa21.44■■□□□ 1.02
ITGB4-213ENST00000584939 NF2P35240 595 aa21.44■■□□□ 1.02
ITGB4-213ENST00000584939 KIF23Q02241 960 aaPredicted RBP21.44■■□□□ 1.02
ITGB4-213ENST00000584939 PTPN12Q05209 780 aaKnown RBP21.44■■□□□ 1.02
ITGB4-213ENST00000584939 TTLL12Q14166 644 aaPredicted RBP21.44■■□□□ 1.02
ITGB4-213ENST00000584939 CAVIN4Q5BKX8 364 aa21.44■■□□□ 1.02
ITGB4-213ENST00000584939 HDAC5Q9UQL6 1122 aa21.44■■□□□ 1.02
ITGB4-213ENST00000584939 SPDYE2BA6NHP3 402 aa21.43■■□□□ 1.02
ITGB4-213ENST00000584939 SPDYE6P0CI01 402 aa21.43■■□□□ 1.02
ITGB4-213ENST00000584939 RBM5P52756 815 aaKnown RBP eCLIP21.43■■□□□ 1.02
ITGB4-213ENST00000584939 PRMT6Q96LA8 375 aaPredicted RBP21.43■■□□□ 1.02
ITGB4-213ENST00000584939 IQSEC3Q9UPP2 1182 aaPredicted RBP21.43■■□□□ 1.02
ITGB4-213ENST00000584939 LRRFIP2Q9Y608 721 aaKnown RBP21.43■■□□□ 1.02
ITGB4-213ENST00000584939 MYO1BO43795 1136 aa21.42■■□□□ 1.02
ITGB4-213ENST00000584939 FRAT2O75474 233 aaPredicted RBP21.42■■□□□ 1.02
ITGB4-213ENST00000584939 BCAMP50895 628 aa21.42■■□□□ 1.02
ITGB4-213ENST00000584939 PUM3Q15397 648 aaKnown RBP21.42■■□□□ 1.02
ITGB4-213ENST00000584939 PAPPA2Q9BXP8 1791 aa21.41■■□□□ 1.02
ITGB4-213ENST00000584939 CLRN2A0PK11 232 aa21.41■■□□□ 1.02
ITGB4-213ENST00000584939 IPO8O15397 1037 aaKnown RBP21.41■■□□□ 1.02
ITGB4-213ENST00000584939 IFIT1P09914 478 aaKnown RBP21.41■■□□□ 1.02
ITGB4-213ENST00000584939 FGFR2P21802 821 aa21.41■■□□□ 1.02
ITGB4-213ENST00000584939 CHAF1AQ13111 956 aaPredicted RBP21.41■■□□□ 1.02
ITGB4-213ENST00000584939 INTS3Q68E01 1043 aaKnown RBP21.41■■□□□ 1.02
ITGB4-213ENST00000584939 RASAL3Q86YV0 1011 aa21.41■■□□□ 1.02
ITGB4-213ENST00000584939 MEIS3Q99687 375 aa21.41■■□□□ 1.02
ITGB4-213ENST00000584939 DEFB129Q9H1M3 183 aa21.41■■□□□ 1.02
ITGB4-213ENST00000584939 TTF2Q9UNY4 1162 aaKnown RBP21.41■■□□□ 1.02
ITGB4-213ENST00000584939 BCAR3O75815 825 aa21.4■■□□□ 1.02
ITGB4-213ENST00000584939 ATG9AQ7Z3C6 839 aa21.4■■□□□ 1.02
ITGB4-213ENST00000584939 SIL1Q9H173 461 aa21.4■■□□□ 1.02
ITGB4-213ENST00000584939 AOX1Q06278 1338 aa21.39■■□□□ 1.01
ITGB4-213ENST00000584939 PRKG1Q13976 671 aa21.39■■□□□ 1.01
ITGB4-213ENST00000584939 ARMC9Q7Z3E5 817 aa21.39■■□□□ 1.01
ITGB4-213ENST00000584939 FRAT1Q92837 279 aaPredicted RBP21.39■■□□□ 1.01
ITGB4-213ENST00000584939 CSRNP1Q96S65 589 aa21.39■■□□□ 1.01
ITGB4-213ENST00000584939 VEZTQ9HBM0 779 aa21.39■■□□□ 1.01
ITGB4-213ENST00000584939 SERPINA10Q9UK55 444 aa21.39■■□□□ 1.01
ITGB4-213ENST00000584939 FBXO3Q9UK99 471 aa21.39■■□□□ 1.01
ITGB4-213ENST00000584939 CIAO1O76071 339 aa21.38■■□□□ 1.01
ITGB4-213ENST00000584939 SLC5A1P13866 664 aa21.38■■□□□ 1.01
ITGB4-213ENST00000584939 TBC1D22AQ8WUA7 517 aa21.38■■□□□ 1.01
ITGB4-213ENST00000584939 LPIN2Q92539 896 aa21.38■■□□□ 1.01
ITGB4-213ENST00000584939 PPP2R3BQ9Y5P8 575 aa21.38■■□□□ 1.01
ITGB4-213ENST00000584939 GNAI3P08754 354 aa21.37■■□□□ 1.01
ITGB4-213ENST00000584939 TRIM27P14373 513 aa21.37■■□□□ 1.01
ITGB4-213ENST00000584939 GRIK5Q16478 980 aa21.37■■□□□ 1.01
ITGB4-213ENST00000584939 CEP126Q9P2H0 1117 aa21.37■■□□□ 1.01
ITGB4-213ENST00000584939 COL1A1P02452 1464 aaPredicted RBP21.37■■□□□ 1.01
ITGB4-213ENST00000584939 CRKP46108 304 aa21.36■■□□□ 1.01
ITGB4-213ENST00000584939 ATF7IPQ6VMQ6 1270 aa21.36■■□□□ 1.01
ITGB4-213ENST00000584939 REM2Q8IYK8 340 aaPredicted RBP21.36■■□□□ 1.01
ITGB4-213ENST00000584939 DZIP1LQ8IYY4 767 aaKnown RBP21.36■■□□□ 1.01
ITGB4-213ENST00000584939 RNF186Q9NXI6 227 aa21.36■■□□□ 1.01
ITGB4-213ENST00000584939 ANGEL1Q9UNK9 670 aaKnown RBP21.36■■□□□ 1.01
ITGB4-213ENST00000584939 PA2G4Q9UQ80 394 aaKnown RBP21.36■■□□□ 1.01
ITGB4-213ENST00000584939 TNNQ9UQP3 1299 aa21.36■■□□□ 1.01
ITGB4-213ENST00000584939 TRPA1O75762 1119 aa21.35■■□□□ 1.01
ITGB4-213ENST00000584939 SPDYE2Q495Y8 402 aa21.35■■□□□ 1.01
ITGB4-213ENST00000584939 TDRD3Q9H7E2 651 aaKnown RBP21.35■■□□□ 1.01
ITGB4-213ENST00000584939 SAGE1Q9NXZ1 904 aa21.35■■□□□ 1.01
ITGB4-213ENST00000584939 ZNF70Q9UC06 446 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms