RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 KIAA0825Q8IV33 1275 aa22.41■■□□□ 1.18
ERBB2-221ENST00000584888 ABHD8Q96I13 439 aa22.41■■□□□ 1.18
ERBB2-221ENST00000584888 SLC10A3P09131 477 aa22.4■■□□□ 1.18
ERBB2-221ENST00000584888 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
ERBB2-221ENST00000584888 PRAMEF18Q5VWM3 479 aa22.4■■□□□ 1.18
ERBB2-221ENST00000584888 HDAC9Q9UKV0 1011 aa22.4■■□□□ 1.18
ERBB2-221ENST00000584888 RIPOR2Q9Y4F9 1068 aa22.4■■□□□ 1.18
ERBB2-221ENST00000584888 SASH1O94885 1247 aa22.39■■□□□ 1.17
ERBB2-221ENST00000584888 PUS3Q9BZE2 481 aaKnown RBP22.39■■□□□ 1.17
ERBB2-221ENST00000584888 CNNM1Q9NRU3 951 aa22.39■■□□□ 1.17
ERBB2-221ENST00000584888 PLIN1O60240 522 aa22.38■■□□□ 1.17
ERBB2-221ENST00000584888 MOB2Q70IA6 237 aa22.38■■□□□ 1.17
ERBB2-221ENST00000584888 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
ERBB2-221ENST00000584888 TRIM27P14373 513 aa22.37■■□□□ 1.17
ERBB2-221ENST00000584888 RFX5P48382 616 aaPredicted RBP22.37■■□□□ 1.17
ERBB2-221ENST00000584888 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
ERBB2-221ENST00000584888 ZNF804AQ7Z570 1209 aa22.37■■□□□ 1.17
ERBB2-221ENST00000584888 CERS5Q8N5B7 392 aa22.37■■□□□ 1.17
ERBB2-221ENST00000584888 ZBED3Q96IU2 234 aaPredicted RBP22.37■■□□□ 1.17
ERBB2-221ENST00000584888 TNNQ9UQP3 1299 aa22.37■■□□□ 1.17
ERBB2-221ENST00000584888 UBE2Q2LH0YL09 131 aa22.36■■□□□ 1.17
ERBB2-221ENST00000584888 IL1R1P14778 569 aa22.36■■□□□ 1.17
ERBB2-221ENST00000584888 RASAL3Q86YV0 1011 aa22.36■■□□□ 1.17
ERBB2-221ENST00000584888 CSRNP1Q96S65 589 aa22.36■■□□□ 1.17
ERBB2-221ENST00000584888 SAGE1Q9NXZ1 904 aa22.35■■□□□ 1.17
ERBB2-221ENST00000584888 PAPPA2Q9BXP8 1791 aa22.35■■□□□ 1.17
ERBB2-221ENST00000584888 CASP8AP2Q9UKL3 1982 aa22.34■■□□□ 1.17
ERBB2-221ENST00000584888 UBTFL1P0CB47 393 aaPredicted RBP22.34■■□□□ 1.17
ERBB2-221ENST00000584888 DLGAP5Q15398 846 aa22.34■■□□□ 1.17
ERBB2-221ENST00000584888 LRRC24Q50LG9 513 aa22.34■■□□□ 1.17
ERBB2-221ENST00000584888 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
ERBB2-221ENST00000584888 MEIS3Q99687 375 aa22.34■■□□□ 1.17
ERBB2-221ENST00000584888 RNF186Q9NXI6 227 aa22.34■■□□□ 1.17
ERBB2-221ENST00000584888 TRPA1O75762 1119 aa22.33■■□□□ 1.17
ERBB2-221ENST00000584888 NF2P35240 595 aa22.33■■□□□ 1.17
ERBB2-221ENST00000584888 UBE4AQ14139 1066 aa22.33■■□□□ 1.17
ERBB2-221ENST00000584888 TTLL12Q14166 644 aaPredicted RBP22.33■■□□□ 1.17
ERBB2-221ENST00000584888 MROH5Q6ZUA9 1318 aa22.32■■□□□ 1.16
ERBB2-221ENST00000584888 F8W031 263 aaPredicted RBP22.32■■□□□ 1.16
ERBB2-221ENST00000584888 FKBP1AP62942 108 aaKnown RBP22.32■■□□□ 1.16
ERBB2-221ENST00000584888 PTPN12Q05209 780 aaKnown RBP22.32■■□□□ 1.16
ERBB2-221ENST00000584888 REM2Q8IYK8 340 aaPredicted RBP22.32■■□□□ 1.16
ERBB2-221ENST00000584888 VGLL2Q8N8G2 317 aa22.32■■□□□ 1.16
ERBB2-221ENST00000584888 MTMR14Q8NCE2 650 aa22.32■■□□□ 1.16
ERBB2-221ENST00000584888 KLHDC4Q8TBB5 520 aa22.32■■□□□ 1.16
ERBB2-221ENST00000584888 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
ERBB2-221ENST00000584888 JAG2Q9Y219 1238 aa22.32■■□□□ 1.16
ERBB2-221ENST00000584888 MCOLN1Q9GZU1 580 aa22.31■■□□□ 1.16
ERBB2-221ENST00000584888 HDAC5Q9UQL6 1122 aa22.31■■□□□ 1.16
ERBB2-221ENST00000584888 PCDHAC2Q9Y5I4 1007 aa22.31■■□□□ 1.16
ERBB2-221ENST00000584888 LRRFIP2Q9Y608 721 aaKnown RBP22.31■■□□□ 1.16
ERBB2-221ENST00000584888 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
ERBB2-221ENST00000584888 CCDC85CA6NKD9 419 aa22.29■■□□□ 1.16
ERBB2-221ENST00000584888 GNAI3P08754 354 aa22.29■■□□□ 1.16
ERBB2-221ENST00000584888 HIBADHP31937 336 aaKnown RBP22.29■■□□□ 1.16
ERBB2-221ENST00000584888 GYG1P46976 350 aa22.29■■□□□ 1.16
ERBB2-221ENST00000584888 DGKZQ13574 1117 aa22.29■■□□□ 1.16
ERBB2-221ENST00000584888 CFAP100Q494V2 611 aa22.29■■□□□ 1.16
ERBB2-221ENST00000584888 TDRD7Q8NHU6 1098 aaKnown RBP22.29■■□□□ 1.16
ERBB2-221ENST00000584888 FAM84BQ96KN1 310 aaPredicted RBP22.29■■□□□ 1.16
ERBB2-221ENST00000584888 DEFB129Q9H1M3 183 aa22.29■■□□□ 1.16
ERBB2-221ENST00000584888 EYA2O00167 538 aa22.28■■□□□ 1.16
ERBB2-221ENST00000584888 PRKG1Q13976 671 aa22.28■■□□□ 1.16
ERBB2-221ENST00000584888 ATG9AQ7Z3C6 839 aa22.28■■□□□ 1.16
ERBB2-221ENST00000584888 ARMC9Q7Z3E5 817 aa22.28■■□□□ 1.16
ERBB2-221ENST00000584888 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
ERBB2-221ENST00000584888 PRMT6Q96LA8 375 aaPredicted RBP22.28■■□□□ 1.16
ERBB2-221ENST00000584888 FAM205AQ6ZU69 1335 aa22.28■■□□□ 1.16
ERBB2-221ENST00000584888 SPDYE2BA6NHP3 402 aa22.27■■□□□ 1.16
ERBB2-221ENST00000584888 PDE8BO95263 885 aa22.27■■□□□ 1.16
ERBB2-221ENST00000584888 SPDYE6P0CI01 402 aa22.27■■□□□ 1.16
ERBB2-221ENST00000584888 METTL24Q5JXM2 366 aa22.27■■□□□ 1.16
ERBB2-221ENST00000584888 TMEM57Q8N5G2 664 aa22.27■■□□□ 1.16
ERBB2-221ENST00000584888 FBXO3Q9UK99 471 aa22.27■■□□□ 1.16
ERBB2-221ENST00000584888 MYO1BO43795 1136 aa22.26■■□□□ 1.15
ERBB2-221ENST00000584888 FGFR2P21802 821 aa22.26■■□□□ 1.15
ERBB2-221ENST00000584888 MTX1Q13505 466 aa22.26■■□□□ 1.15
ERBB2-221ENST00000584888 FBXO33Q7Z6M2 555 aa22.26■■□□□ 1.15
ERBB2-221ENST00000584888 AKAP11Q9UKA4 1901 aa22.25■■□□□ 1.15
ERBB2-221ENST00000584888 CLRN2A0PK11 232 aa22.25■■□□□ 1.15
ERBB2-221ENST00000584888 RBM5P52756 815 aaKnown RBP eCLIP22.25■■□□□ 1.15
ERBB2-221ENST00000584888 MFSD14BQ5SR56 506 aa22.25■■□□□ 1.15
ERBB2-221ENST00000584888 LDLRAD1Q5T700 205 aa22.25■■□□□ 1.15
ERBB2-221ENST00000584888 ANGEL1Q9UNK9 670 aaKnown RBP22.25■■□□□ 1.15
ERBB2-221ENST00000584888 AOX1Q06278 1338 aa22.25■■□□□ 1.15
ERBB2-221ENST00000584888 COL1A1P02452 1464 aaPredicted RBP22.24■■□□□ 1.15
ERBB2-221ENST00000584888 CIAO1O76071 339 aa22.24■■□□□ 1.15
ERBB2-221ENST00000584888 COPRSQ9NQ92 184 aa22.24■■□□□ 1.15
ERBB2-221ENST00000584888 FZD1Q9UP38 647 aa22.24■■□□□ 1.15
ERBB2-221ENST00000584888 PPP2R3BQ9Y5P8 575 aa22.24■■□□□ 1.15
ERBB2-221ENST00000584888 RLBP1P12271 317 aa22.23■■□□□ 1.15
ERBB2-221ENST00000584888 TM4SF4P48230 202 aa22.23■■□□□ 1.15
ERBB2-221ENST00000584888 MKRN3Q13064 507 aaKnown RBP22.23■■□□□ 1.15
ERBB2-221ENST00000584888 VEZTQ9HBM0 779 aa22.23■■□□□ 1.15
ERBB2-221ENST00000584888 TTF2Q9UNY4 1162 aaKnown RBP22.23■■□□□ 1.15
ERBB2-221ENST00000584888 VPS37DQ86XT2 251 aa22.22■■□□□ 1.15
ERBB2-221ENST00000584888 DZIP1LQ8IYY4 767 aaKnown RBP22.22■■□□□ 1.15
ERBB2-221ENST00000584888 PA2G4Q9UQ80 394 aaKnown RBP22.22■■□□□ 1.15
ERBB2-221ENST00000584888 GNAI2P04899 355 aa22.21■■□□□ 1.15
ERBB2-221ENST00000584888 SUPT20HL1Q3ZLR7 823 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms