RNA–Protein interactions for RNA: ENST00000584856.1

PGAP3-210, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-210ENST00000584856 WDR66Q8TBY9 1149 aa13.68□□□□□ -0.22
PGAP3-210ENST00000584856 DBNDD2Q9BQY9 259 aa13.68□□□□□ -0.22
PGAP3-210ENST00000584856 GPBP1L1Q9HC44 474 aaPredicted RBP13.68□□□□□ -0.22
PGAP3-210ENST00000584856 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
PGAP3-210ENST00000584856 GPRC5DQ9NZD1 345 aa13.68□□□□□ -0.22
PGAP3-210ENST00000584856 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
PGAP3-210ENST00000584856 POTECB2RU33 542 aa13.67□□□□□ -0.22
PGAP3-210ENST00000584856 APBB1O00213 710 aa13.67□□□□□ -0.22
PGAP3-210ENST00000584856 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
PGAP3-210ENST00000584856 IGHDP01880 384 aa13.67□□□□□ -0.22
PGAP3-210ENST00000584856 IFIT2P09913 472 aaKnown RBP13.67□□□□□ -0.22
PGAP3-210ENST00000584856 GMPSP49915 693 aaPredicted RBP13.67□□□□□ -0.22
PGAP3-210ENST00000584856 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
PGAP3-210ENST00000584856 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
PGAP3-210ENST00000584856 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
PGAP3-210ENST00000584856 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
PGAP3-210ENST00000584856 IGSF3O75054 1194 aa13.66□□□□□ -0.22
PGAP3-210ENST00000584856 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
PGAP3-210ENST00000584856 ZNF280AP59817 542 aaPredicted RBP13.66□□□□□ -0.22
PGAP3-210ENST00000584856 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
PGAP3-210ENST00000584856 CCDC8Q9H0W5 538 aaPredicted RBP13.66□□□□□ -0.22
PGAP3-210ENST00000584856 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
PGAP3-210ENST00000584856 H7C1D1 291 aa13.65□□□□□ -0.22
PGAP3-210ENST00000584856 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
PGAP3-210ENST00000584856 MFSD14BQ5SR56 506 aa13.65□□□□□ -0.22
PGAP3-210ENST00000584856 CERS5Q8N5B7 392 aa13.65□□□□□ -0.22
PGAP3-210ENST00000584856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.65□□□□□ -0.22
PGAP3-210ENST00000584856 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
PGAP3-210ENST00000584856 RRAGCQ9HB90 399 aa13.65□□□□□ -0.22
PGAP3-210ENST00000584856 NMRK2Q9NPI5 230 aa13.65□□□□□ -0.22
PGAP3-210ENST00000584856 TLR7Q9NYK1 1049 aaKnown RBP13.65□□□□□ -0.22
PGAP3-210ENST00000584856 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
PGAP3-210ENST00000584856 CNOT7Q9UIV1 285 aaKnown RBP13.65□□□□□ -0.22
PGAP3-210ENST00000584856 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
PGAP3-210ENST00000584856 ZBTB12Q9Y330 459 aaPredicted RBP13.65□□□□□ -0.22
PGAP3-210ENST00000584856 PSME4Q14997 1843 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 EPS15P42566 896 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 C1QTNF8P60827 252 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 TTC39AQ5SRH9 613 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 USP50Q70EL3 339 aaPredicted RBP13.64□□□□□ -0.23
PGAP3-210ENST00000584856 PNMA8AQ86V59 439 aaPredicted RBP13.64□□□□□ -0.23
PGAP3-210ENST00000584856 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
PGAP3-210ENST00000584856 SPATA5Q8NB90 893 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 ZNF526Q8TF50 670 aaPredicted RBP13.64□□□□□ -0.23
PGAP3-210ENST00000584856 MRIQ9BWK5 157 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 ADARB2Q9NS39 739 aaKnown RBP13.64□□□□□ -0.23
PGAP3-210ENST00000584856 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
PGAP3-210ENST00000584856 KIF3CO14782 793 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
PGAP3-210ENST00000584856 EPHX2P34913 555 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 MCAMP43121 646 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
PGAP3-210ENST00000584856 NUCB1Q02818 461 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
PGAP3-210ENST00000584856 ANKRD45Q5TZF3 282 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 MXD3Q9BW11 206 aa13.63□□□□□ -0.23
PGAP3-210ENST00000584856 SCN4AP35499 1836 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 COL1A1P02452 1464 aaPredicted RBP13.62□□□□□ -0.23
PGAP3-210ENST00000584856 ATP5JP18859 108 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 SCARF1Q14162 830 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
PGAP3-210ENST00000584856 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 GPATCH3Q96I76 525 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 ECHDC1Q9NTX5 307 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 MAST3O60307 1309 aa13.62□□□□□ -0.23
PGAP3-210ENST00000584856 TMED8Q6PL24 325 aaPredicted RBP13.61□□□□□ -0.23
PGAP3-210ENST00000584856 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
PGAP3-210ENST00000584856 KIAA0825Q8IV33 1275 aa13.61□□□□□ -0.23
PGAP3-210ENST00000584856 ZC3H15Q8WU90 426 aaKnown RBP13.61□□□□□ -0.23
PGAP3-210ENST00000584856 SERPINA10Q9UK55 444 aa13.61□□□□□ -0.23
PGAP3-210ENST00000584856 JAG2Q9Y219 1238 aa13.61□□□□□ -0.23
PGAP3-210ENST00000584856 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
PGAP3-210ENST00000584856 SALL3Q9BXA9 1300 aa13.61□□□□□ -0.23
PGAP3-210ENST00000584856 ZNF646O15015 1829 aaPredicted RBP13.6□□□□□ -0.23
PGAP3-210ENST00000584856 TOMM70O94826 608 aa13.6□□□□□ -0.23
PGAP3-210ENST00000584856 LDHBP07195 334 aaKnown RBP13.6□□□□□ -0.23
PGAP3-210ENST00000584856 ZBED3Q96IU2 234 aaPredicted RBP13.6□□□□□ -0.23
PGAP3-210ENST00000584856 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
PGAP3-210ENST00000584856 STAP2Q9UGK3 403 aa13.6□□□□□ -0.23
PGAP3-210ENST00000584856 PGAP2Q9UHJ9 254 aa13.6□□□□□ -0.23
PGAP3-210ENST00000584856 TTF2Q9UNY4 1162 aaKnown RBP13.6□□□□□ -0.23
PGAP3-210ENST00000584856 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
PGAP3-210ENST00000584856 KIF4BQ2VIQ3 1234 aa13.59□□□□□ -0.23
PGAP3-210ENST00000584856 HHIPL2Q6UWX4 724 aa13.59□□□□□ -0.23
PGAP3-210ENST00000584856 PI16Q6UXB8 463 aa13.59□□□□□ -0.23
PGAP3-210ENST00000584856 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
PGAP3-210ENST00000584856 LDHDQ86WU2 507 aa13.59□□□□□ -0.23
PGAP3-210ENST00000584856 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
PGAP3-210ENST00000584856 HAUS7Q99871 368 aa13.59□□□□□ -0.23
PGAP3-210ENST00000584856 SHTN1A0MZ66 631 aa13.58□□□□□ -0.24
PGAP3-210ENST00000584856 ERC2O15083 957 aa13.58□□□□□ -0.24
PGAP3-210ENST00000584856 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
PGAP3-210ENST00000584856 MX1P20591 662 aa13.58□□□□□ -0.24
PGAP3-210ENST00000584856 PRDX5P30044 214 aa13.58□□□□□ -0.24
PGAP3-210ENST00000584856 ZAP70P43403 619 aa13.58□□□□□ -0.24
PGAP3-210ENST00000584856 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms