RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 ZNF280AP59817 542 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-223ENST00000584760 INTS3Q68E01 1043 aaKnown RBP16.7■□□□□ 0.26
SREBF1-223ENST00000584760 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
SREBF1-223ENST00000584760 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
SREBF1-223ENST00000584760 ECM29Q5VYK3 1845 aa16.69■□□□□ 0.26
SREBF1-223ENST00000584760 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-223ENST00000584760 SCARF1Q14162 830 aa16.69■□□□□ 0.26
SREBF1-223ENST00000584760 ANGEL2Q5VTE6 544 aaKnown RBP16.69■□□□□ 0.26
SREBF1-223ENST00000584760 ATF7IPQ6VMQ6 1270 aa16.69■□□□□ 0.26
SREBF1-223ENST00000584760 CTU1Q7Z7A3 348 aaKnown RBP16.69■□□□□ 0.26
SREBF1-223ENST00000584760 MEIS3Q99687 375 aa16.69■□□□□ 0.26
SREBF1-223ENST00000584760 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
SREBF1-223ENST00000584760 RFX5P48382 616 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-223ENST00000584760 STRIP1Q5VSL9 837 aa16.68■□□□□ 0.26
SREBF1-223ENST00000584760 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
SREBF1-223ENST00000584760 MXD3Q9BW11 206 aa16.68■□□□□ 0.26
SREBF1-223ENST00000584760 CD209Q9NNX6 404 aa16.68■□□□□ 0.26
SREBF1-223ENST00000584760 MROH5Q6ZUA9 1318 aa16.68■□□□□ 0.26
SREBF1-223ENST00000584760 MYO3BQ8WXR4 1341 aa16.68■□□□□ 0.26
SREBF1-223ENST00000584760 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
SREBF1-223ENST00000584760 PLIN1O60240 522 aa16.67■□□□□ 0.26
SREBF1-223ENST00000584760 UBE4AQ14139 1066 aa16.67■□□□□ 0.26
SREBF1-223ENST00000584760 LRRC24Q50LG9 513 aa16.67■□□□□ 0.26
SREBF1-223ENST00000584760 RASAL3Q86YV0 1011 aa16.67■□□□□ 0.26
SREBF1-223ENST00000584760 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
SREBF1-223ENST00000584760 USP17L8P0C7I0 530 aa16.66■□□□□ 0.26
SREBF1-223ENST00000584760 IL1R1P14778 569 aa16.66■□□□□ 0.26
SREBF1-223ENST00000584760 ZNF804AQ7Z570 1209 aa16.66■□□□□ 0.26
SREBF1-223ENST00000584760 FRAT1Q92837 279 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-223ENST00000584760 SCAF8Q9UPN6 1271 aaKnown RBP16.66■□□□□ 0.26
SREBF1-223ENST00000584760 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
SREBF1-223ENST00000584760 GTF2IP78347 998 aa16.65■□□□□ 0.26
SREBF1-223ENST00000584760 PTPN12Q05209 780 aaKnown RBP16.65■□□□□ 0.26
SREBF1-223ENST00000584760 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
SREBF1-223ENST00000584760 MOB2Q70IA6 237 aa16.65■□□□□ 0.26
SREBF1-223ENST00000584760 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-223ENST00000584760 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
SREBF1-223ENST00000584760 HDAC9Q9UKV0 1011 aa16.65■□□□□ 0.26
SREBF1-223ENST00000584760 HPS5Q9UPZ3 1129 aa16.65■□□□□ 0.26
SREBF1-223ENST00000584760 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-223ENST00000584760 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
SREBF1-223ENST00000584760 FKBP1BP68106 108 aa16.64■□□□□ 0.25
SREBF1-223ENST00000584760 METTL24Q5JXM2 366 aa16.64■□□□□ 0.25
SREBF1-223ENST00000584760 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
SREBF1-223ENST00000584760 CLUAP1Q96AJ1 413 aa16.64■□□□□ 0.25
SREBF1-223ENST00000584760 MYOZ2Q9NPC6 264 aa16.64■□□□□ 0.25
SREBF1-223ENST00000584760 HDAC5Q9UQL6 1122 aa16.64■□□□□ 0.25
SREBF1-223ENST00000584760 UBE2Q2LH0YL09 131 aa16.63■□□□□ 0.25
SREBF1-223ENST00000584760 EYA2O00167 538 aa16.63■□□□□ 0.25
SREBF1-223ENST00000584760 PDE8BO95263 885 aa16.63■□□□□ 0.25
SREBF1-223ENST00000584760 GNAI3P08754 354 aa16.63■□□□□ 0.25
SREBF1-223ENST00000584760 PRAMEF18Q5VWM3 479 aa16.63■□□□□ 0.25
SREBF1-223ENST00000584760 GYG1P46976 350 aa16.62■□□□□ 0.25
SREBF1-223ENST00000584760 PRPF38BQ5VTL8 546 aaKnown RBP16.62■□□□□ 0.25
SREBF1-223ENST00000584760 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
SREBF1-223ENST00000584760 CERS5Q8N5B7 392 aa16.62■□□□□ 0.25
SREBF1-223ENST00000584760 TMEM57Q8N5G2 664 aa16.62■□□□□ 0.25
SREBF1-223ENST00000584760 ZNF296Q8WUU4 475 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-223ENST00000584760 FAM84BQ96KN1 310 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-223ENST00000584760 CIAO1O76071 339 aa16.61■□□□□ 0.25
SREBF1-223ENST00000584760 FKBP1AP62942 108 aaKnown RBP16.61■□□□□ 0.25
SREBF1-223ENST00000584760 MTX1Q13505 466 aa16.61■□□□□ 0.25
SREBF1-223ENST00000584760 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-223ENST00000584760 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
SREBF1-223ENST00000584760 KIAA0825Q8IV33 1275 aa16.61■□□□□ 0.25
SREBF1-223ENST00000584760 OGFOD1Q8N543 542 aa16.61■□□□□ 0.25
SREBF1-223ENST00000584760 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
SREBF1-223ENST00000584760 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
SREBF1-223ENST00000584760 FAM205AQ6ZU69 1335 aa16.61■□□□□ 0.25
SREBF1-223ENST00000584760 PITPNM2Q9BZ72 1349 aa16.61■□□□□ 0.25
SREBF1-223ENST00000584760 FGFR2P21802 821 aa16.6■□□□□ 0.25
SREBF1-223ENST00000584760 HIBADHP31937 336 aaKnown RBP16.6■□□□□ 0.25
SREBF1-223ENST00000584760 MMP14P50281 582 aa16.6■□□□□ 0.25
SREBF1-223ENST00000584760 PKN2Q16513 984 aaKnown RBP16.6■□□□□ 0.25
SREBF1-223ENST00000584760 FBXO33Q7Z6M2 555 aa16.6■□□□□ 0.25
SREBF1-223ENST00000584760 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
SREBF1-223ENST00000584760 JAG2Q9Y219 1238 aa16.6■□□□□ 0.25
SREBF1-223ENST00000584760 AKAP11Q9UKA4 1901 aa16.6■□□□□ 0.25
SREBF1-223ENST00000584760 PDE4DIPQ5VU43 2346 aa16.59■□□□□ 0.25
SREBF1-223ENST00000584760 WNT10BO00744 389 aa16.59■□□□□ 0.25
SREBF1-223ENST00000584760 SASH1O94885 1247 aa16.59■□□□□ 0.25
SREBF1-223ENST00000584760 RLBP1P12271 317 aa16.59■□□□□ 0.25
SREBF1-223ENST00000584760 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
SREBF1-223ENST00000584760 NBPF9Q3BBW0 867 aa16.59■□□□□ 0.25
SREBF1-223ENST00000584760 SIL1Q9H173 461 aa16.59■□□□□ 0.25
SREBF1-223ENST00000584760 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
SREBF1-223ENST00000584760 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
SREBF1-223ENST00000584760 ZBED3Q96IU2 234 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-223ENST00000584760 COL1A1P02452 1464 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-223ENST00000584760 GPR25O00155 361 aa16.57■□□□□ 0.24
SREBF1-223ENST00000584760 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
SREBF1-223ENST00000584760 GNAI2P04899 355 aa16.57■□□□□ 0.24
SREBF1-223ENST00000584760 TM4SF4P48230 202 aa16.57■□□□□ 0.24
SREBF1-223ENST00000584760 FTSJ3Q8IY81 847 aaKnown RBP16.57■□□□□ 0.24
SREBF1-223ENST00000584760 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
SREBF1-223ENST00000584760 IFIT1P09914 478 aaKnown RBP16.56■□□□□ 0.24
SREBF1-223ENST00000584760 NF2P35240 595 aa16.56■□□□□ 0.24
SREBF1-223ENST00000584760 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-223ENST00000584760 PRKG1Q13976 671 aa16.56■□□□□ 0.24
SREBF1-223ENST00000584760 CAVIN4Q5BKX8 364 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms