RNA–Protein interactions for RNA: ENST00000583559.1

PER1-215, Transcript of period circadian regulator 1, human

TSL 2

Gene PER1, Length 523 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PER1-215	ENST00000583559	DOK7	Q18PE1	504 aa		11.92	□□□□□ -0.5
PER1-215	ENST00000583559	EAPP	Q56P03	285 aa	Predicted RBP	11.92	□□□□□ -0.5
PER1-215	ENST00000583559	GPR101	Q96P66	508 aa	Predicted RBP	11.92	□□□□□ -0.5
PER1-215	ENST00000583559	DENND2A	Q9ULE3	1009 aa		11.92	□□□□□ -0.5
PER1-215	ENST00000583559	GJA3	Q9Y6H8	435 aa		11.92	□□□□□ -0.5
PER1-215	ENST00000583559	ITGBL1	O95965	494 aa	Predicted RBP	11.91	□□□□□ -0.5
PER1-215	ENST00000583559	TNIP1	Q15025	636 aa		11.91	□□□□□ -0.5
PER1-215	ENST00000583559	MAP1S	Q66K74	1059 aa	Predicted RBP	11.91	□□□□□ -0.5
PER1-215	ENST00000583559	CCDC102B	Q68D86	513 aa		11.91	□□□□□ -0.5
PER1-215	ENST00000583559	FAM84B	Q96KN1	310 aa	Predicted RBP	11.91	□□□□□ -0.5
PER1-215	ENST00000583559	DBNDD2	Q9BQY9	259 aa		11.91	□□□□□ -0.5
PER1-215	ENST00000583559	DBNDD1	Q9H9R9	158 aa		11.91	□□□□□ -0.5
PER1-215	ENST00000583559	CD209	Q9NNX6	404 aa		11.91	□□□□□ -0.5
PER1-215	ENST00000583559	ECHDC1	Q9NTX5	307 aa		11.91	□□□□□ -0.5
PER1-215	ENST00000583559	ZNRF3	Q9ULT6	936 aa		11.91	□□□□□ -0.5
PER1-215	ENST00000583559	TTC41P	Q6P2S7	1318 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	YDJC	A8MPS7	323 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	ZNF609	O15014	1411 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	SEMA3E	O15041	775 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	ECE2	O60344	883 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	MX1	P20591	662 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	ADORA1	P30542	326 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	EPS15	P42566	896 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	CXCL9	Q07325	125 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	CHAF1A	Q13111	956 aa	Predicted RBP	11.9	□□□□□ -0.5
PER1-215	ENST00000583559	FBXO33	Q7Z6M2	555 aa		11.9	□□□□□ -0.5
PER1-215	ENST00000583559	ZGPAT	Q8N5A5	531 aa	Known RBP	11.9	□□□□□ -0.5
PER1-215	ENST00000583559		A0A1B0GUL6	1792 aa		11.9	□□□□□ -0.51
PER1-215	ENST00000583559	GLRX3	O76003	335 aa	Known RBP	11.89	□□□□□ -0.51
PER1-215	ENST00000583559	PHKA1	P46020	1223 aa		11.89	□□□□□ -0.51
PER1-215	ENST00000583559	FMR1	Q06787	632 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
PER1-215	ENST00000583559	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.89	□□□□□ -0.51
PER1-215	ENST00000583559	TTLL5	Q6EMB2	1281 aa		11.89	□□□□□ -0.51
PER1-215	ENST00000583559	WDR66	Q8TBY9	1149 aa		11.89	□□□□□ -0.51
PER1-215	ENST00000583559	TBC1D22A	Q8WUA7	517 aa		11.89	□□□□□ -0.51
PER1-215	ENST00000583559	CREBZF	Q9NS37	354 aa		11.89	□□□□□ -0.51
PER1-215	ENST00000583559	DBNL	Q9UJU6	430 aa	Known RBP	11.89	□□□□□ -0.51
PER1-215	ENST00000583559	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.89	□□□□□ -0.51
PER1-215	ENST00000583559	MYH13	Q9UKX3	1938 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	SHTN1	A0MZ66	631 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	USP17L3	A6NCW0	530 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	USP17L4	A6NCW7	530 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	WTIP	A6NIX2	430 aa	Predicted RBP	11.88	□□□□□ -0.51
PER1-215	ENST00000583559	IL1R1	P14778	569 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	KLRK1	P26718	216 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	RGS3	P49796	1198 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	GTF2I	P78347	998 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	TTF1	Q15361	905 aa	Predicted RBP	11.88	□□□□□ -0.51
PER1-215	ENST00000583559	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.88	□□□□□ -0.51
PER1-215	ENST00000583559	CIAPIN1	Q6FI81	312 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	USP17L1	Q7RTZ2	530 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	TXNRD3	Q86VQ6	643 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	TDRD7	Q8NHU6	1098 aa	Known RBP	11.88	□□□□□ -0.51
PER1-215	ENST00000583559	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.88	□□□□□ -0.51
PER1-215	ENST00000583559	BOLA2	Q9H3K6	86 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	MKRN1	Q9UHC7	482 aa	Known RBP	11.88	□□□□□ -0.51
PER1-215	ENST00000583559	CNTNAP1	P78357	1384 aa		11.88	□□□□□ -0.51
PER1-215	ENST00000583559	TRIM6-TRIM34	B2RNG4	842 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	RAD17	O75943	681 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	ATP5J	P18859	108 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	GMPS	P49915	693 aa	Predicted RBP	11.87	□□□□□ -0.51
PER1-215	ENST00000583559	PDE1A	P54750	535 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	IFFO2	Q5TF58	517 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	PNMA8A	Q86V59	439 aa	Predicted RBP	11.87	□□□□□ -0.51
PER1-215	ENST00000583559	CNTROB	Q8N137	903 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	SPATA5	Q8NB90	893 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
PER1-215	ENST00000583559	DNAJC2	Q99543	621 aa	Known RBP	11.87	□□□□□ -0.51
PER1-215	ENST00000583559	GPRC5D	Q9NZD1	345 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	LRP2BP	Q9P2M1	347 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	ABCF2	Q9UG63	623 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	CLEC11A	Q9Y240	323 aa		11.87	□□□□□ -0.51
PER1-215	ENST00000583559	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.87	□□□□□ -0.51
PER1-215	ENST00000583559	HSPA1A	P0DMV8	641 aa	Known RBP	11.86	□□□□□ -0.51
PER1-215	ENST00000583559	HSPA1B	P0DMV9	641 aa	Known RBP	11.86	□□□□□ -0.51
PER1-215	ENST00000583559	ARID4A	P29374	1257 aa	Predicted RBP	11.86	□□□□□ -0.51
PER1-215	ENST00000583559	LMOD1	P29536	600 aa	Predicted RBP	11.86	□□□□□ -0.51
PER1-215	ENST00000583559	STRIP1	Q5VSL9	837 aa		11.86	□□□□□ -0.51
PER1-215	ENST00000583559	SLF2	Q8IX21	1173 aa		11.86	□□□□□ -0.51
PER1-215	ENST00000583559	SNRK	Q9NRH2	765 aa		11.86	□□□□□ -0.51
PER1-215	ENST00000583559	TLR7	Q9NYK1	1049 aa	Known RBP	11.86	□□□□□ -0.51
PER1-215	ENST00000583559	HDAC9	Q9UKV0	1011 aa		11.86	□□□□□ -0.51
PER1-215	ENST00000583559	AOX1	Q06278	1338 aa		11.86	□□□□□ -0.51
PER1-215	ENST00000583559	MYO3B	Q8WXR4	1341 aa		11.86	□□□□□ -0.51
PER1-215	ENST00000583559	TRAF5	O00463	557 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	MFSD14B	Q5SR56	506 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.85	□□□□□ -0.51
PER1-215	ENST00000583559	ZSCAN25	Q6NSZ9	544 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	ERICH6	Q7L0X2	663 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	PLEKHM2	Q8IWE5	1019 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	OGFOD1	Q8N543	542 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	TRPM4	Q8TD43	1214 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	RILPL2	Q969X0	211 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
PER1-215	ENST00000583559	STAP2	Q9UGK3	403 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	ARAP2	Q8WZ64	1704 aa		11.85	□□□□□ -0.51
PER1-215	ENST00000583559	TMEM88B	A6NKF7	163 aa		11.84	□□□□□ -0.51
PER1-215	ENST00000583559	LDHB	P07195	334 aa	Known RBP	11.84	□□□□□ -0.51
PER1-215	ENST00000583559	LDHC	P07864	332 aa		11.84	□□□□□ -0.51
PER1-215	ENST00000583559	MCAM	P43121	646 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms