RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 SSH3Q8TE77 659 aa17■□□□□ 0.31
CCDC57-217ENST00000583053 HDAC9Q9UKV0 1011 aa17■□□□□ 0.31
CCDC57-217ENST00000583053 FRAT2O75474 233 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-217ENST00000583053 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCDC57-217ENST00000583053 SCARF1Q14162 830 aa16.99■□□□□ 0.31
CCDC57-217ENST00000583053 DCPSQ96C86 337 aaKnown RBP16.99■□□□□ 0.31
CCDC57-217ENST00000583053 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
CCDC57-217ENST00000583053 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
CCDC57-217ENST00000583053 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
CCDC57-217ENST00000583053 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
CCDC57-217ENST00000583053 TFCP2Q12800 502 aa16.98■□□□□ 0.31
CCDC57-217ENST00000583053 DNAJC5GQ8N7S2 189 aa16.98■□□□□ 0.31
CCDC57-217ENST00000583053 GLIS2Q9BZE0 524 aaPredicted RBP16.98■□□□□ 0.31
CCDC57-217ENST00000583053 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
CCDC57-217ENST00000583053 AKAP2Q9Y2D5 859 aa16.98■□□□□ 0.31
CCDC57-217ENST00000583053 TRAF5O00463 557 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 TIMM10P62072 90 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 MFSD14BQ5SR56 506 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 ZBTB40Q9NUA8 1239 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 PSME4Q14997 1843 aa16.97■□□□□ 0.31
CCDC57-217ENST00000583053 F8W031 263 aaPredicted RBP16.96■□□□□ 0.31
CCDC57-217ENST00000583053 WNT10BO00744 389 aa16.96■□□□□ 0.31
CCDC57-217ENST00000583053 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
CCDC57-217ENST00000583053 FMR1Q06787 632 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCDC57-217ENST00000583053 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
CCDC57-217ENST00000583053 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
CCDC57-217ENST00000583053 TBC1D22AQ8WUA7 517 aa16.96■□□□□ 0.31
CCDC57-217ENST00000583053 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.3
CCDC57-217ENST00000583053 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
CCDC57-217ENST00000583053 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
CCDC57-217ENST00000583053 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
CCDC57-217ENST00000583053 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
CCDC57-217ENST00000583053 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
CCDC57-217ENST00000583053 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
CCDC57-217ENST00000583053 NOP58Q9Y2X3 529 aaKnown RBP16.95■□□□□ 0.3
CCDC57-217ENST00000583053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.95■□□□□ 0.3
CCDC57-217ENST00000583053 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
CCDC57-217ENST00000583053 CST9Q5W186 159 aa16.94■□□□□ 0.3
CCDC57-217ENST00000583053 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
CCDC57-217ENST00000583053 MTMR14Q8NCE2 650 aa16.94■□□□□ 0.3
CCDC57-217ENST00000583053 CEP350Q5VT06 3117 aa16.94■□□□□ 0.3
CCDC57-217ENST00000583053 PITPNM2Q9BZ72 1349 aa16.94■□□□□ 0.3
CCDC57-217ENST00000583053 ZNF646O15015 1829 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-217ENST00000583053 ZBTB22O15209 634 aa16.93■□□□□ 0.3
CCDC57-217ENST00000583053 ADORA1P30542 326 aa16.93■□□□□ 0.3
CCDC57-217ENST00000583053 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-217ENST00000583053 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
CCDC57-217ENST00000583053 KLRG1Q96E93 195 aa16.93■□□□□ 0.3
CCDC57-217ENST00000583053 XAGE2Q96GT9 111 aa16.93■□□□□ 0.3
CCDC57-217ENST00000583053 ZBED3Q96IU2 234 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-217ENST00000583053 NEUROD6Q96NK8 337 aa16.93■□□□□ 0.3
CCDC57-217ENST00000583053 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
CCDC57-217ENST00000583053 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
CCDC57-217ENST00000583053 SEMA3EO15041 775 aa16.92■□□□□ 0.3
CCDC57-217ENST00000583053 CELF2O95319 508 aaKnown RBP16.92■□□□□ 0.3
CCDC57-217ENST00000583053 PHKA1P46020 1223 aa16.92■□□□□ 0.3
CCDC57-217ENST00000583053 CFAP100Q494V2 611 aa16.92■□□□□ 0.3
CCDC57-217ENST00000583053 WDR66Q8TBY9 1149 aa16.92■□□□□ 0.3
CCDC57-217ENST00000583053 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
CCDC57-217ENST00000583053 SUGT1Q9Y2Z0 365 aa16.92■□□□□ 0.3
CCDC57-217ENST00000583053 RRP1P56182 461 aaKnown RBP16.91■□□□□ 0.3
CCDC57-217ENST00000583053 DLK2Q6UY11 383 aa16.91■□□□□ 0.3
CCDC57-217ENST00000583053 ZNF408Q9H9D4 720 aa16.91■□□□□ 0.3
CCDC57-217ENST00000583053 SERPINA10Q9UK55 444 aa16.91■□□□□ 0.3
CCDC57-217ENST00000583053 DENND2AQ9ULE3 1009 aa16.91■□□□□ 0.3
CCDC57-217ENST00000583053 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
CCDC57-217ENST00000583053 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
CCDC57-217ENST00000583053 MYO1BO43795 1136 aa16.9■□□□□ 0.3
CCDC57-217ENST00000583053 HMMRO75330 724 aa16.9■□□□□ 0.3
CCDC57-217ENST00000583053 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
CCDC57-217ENST00000583053 RBM5P52756 815 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC57-217ENST00000583053 GRIK5Q16478 980 aa16.9■□□□□ 0.3
CCDC57-217ENST00000583053 GORABQ5T7V8 394 aa16.9■□□□□ 0.3
CCDC57-217ENST00000583053 PRMT6Q96LA8 375 aaPredicted RBP16.9■□□□□ 0.3
CCDC57-217ENST00000583053 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
CCDC57-217ENST00000583053 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
CCDC57-217ENST00000583053 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 APOBEC3FQ8IUX4 373 aaKnown RBP16.89■□□□□ 0.29
CCDC57-217ENST00000583053 SIRT2Q8IXJ6 389 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 MRIQ9BWK5 157 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 PCDHAC2Q9Y5I4 1007 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 TLL2Q9Y6L7 1015 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 CNTNAP1P78357 1384 aa16.89■□□□□ 0.29
CCDC57-217ENST00000583053 CRKP46108 304 aa16.88■□□□□ 0.29
CCDC57-217ENST00000583053 SAPCD2Q86UD0 394 aa16.88■□□□□ 0.29
CCDC57-217ENST00000583053 CDCA5Q96FF9 252 aa16.88■□□□□ 0.29
CCDC57-217ENST00000583053 SCAF8Q9UPN6 1271 aaKnown RBP16.88■□□□□ 0.29
CCDC57-217ENST00000583053 EXOC6BQ9Y2D4 811 aa16.88■□□□□ 0.29
CCDC57-217ENST00000583053 MAST3O60307 1309 aa16.88■□□□□ 0.29
CCDC57-217ENST00000583053 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
CCDC57-217ENST00000583053 COL1A1P02452 1464 aaPredicted RBP16.87■□□□□ 0.29
CCDC57-217ENST00000583053 RASGRF1Q13972 1273 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms