RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 LTBP4Q8N2S1 1624 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 FANCGO15287 622 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 CYP2C19P33261 490 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 UBE3BQ7Z3V4 1068 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 LINC00301Q8NCQ3 95 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 UTP14AQ9BVJ6 771 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 ORC3Q9UBD5 711 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 ATP5J2-PTCD1G3V325 749 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 NRDCO43847 1150 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 ZNF202O95125 648 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 MARCKSP29966 332 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 TPM4P67936 248 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 NCAPHQ15003 741 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 HAUS7Q99871 368 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 RTEL1Q9NZ71 1219 aa11.1□□□□□ -0.63
PPP4R1-222ENST00000582594 SPTLC2O15270 562 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 NLRP12P59046 1061 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 HAND2P61296 217 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 ETF1P62495 437 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 NEDD4P46934 1319 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 SERPINC1P01008 464 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 CAPN2P17655 700 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 RFX5P48382 616 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 CCDC34Q96HJ3 373 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 C8orf76Q96K31 380 aa11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-222ENST00000582594 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 KCNA6P17658 529 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 TIMM10P62072 90 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 ST5P78524 1137 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 GNL2Q13823 731 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 CFAP100Q494V2 611 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 KBTBD3Q8NAB2 608 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 ARGLU1Q9NWB6 273 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 NCAPD2Q15021 1401 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 HSPD1P10809 573 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 PFKFB1P16118 471 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 UBASH3AP57075 661 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 EVCP57679 992 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 ATL3Q6DD88 541 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 TRIM65Q6PJ69 517 aa11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 AEBP2Q6ZN18 517 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-222ENST00000582594 A0A1W2PQ27 194 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 A0A1W2PQ64 194 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 A0A1W2PQD8 194 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 ZRANB2O95218 330 aaKnown RBP eCLIP11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 LMOD2Q6P5Q4 547 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 PAG1Q9NWQ8 432 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 MROH7-TTC4A0A0A0MT08 1334 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 SLIT1O75093 1534 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 TADA3O75528 432 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 GYS2P54840 703 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 HSP90AB3PQ58FF7 597 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 TEX35Q5T0J7 233 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 METTL22Q9BUU2 404 aaPredicted RBP11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 HSD3B7Q9H2F3 369 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 SASH3O75995 380 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 MYSM1Q5VVJ2 828 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 REXO1L1PQ8IX06 675 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 BPIFA3Q9BQP9 254 aa11.07□□□□□ -0.64
PPP4R1-222ENST00000582594 ABCC6O95255 1503 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 PHLPP2Q6ZVD8 1323 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 LMO7Q8WWI1 1683 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 WDHD1O75717 1129 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 OAS2P29728 719 aaKnown RBP11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 PNOCQ13519 176 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 PDILTQ8N807 584 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 KCNG4Q8TDN1 519 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 SMARCE1Q969G3 411 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 ZNF274Q96GC6 653 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 SH3TC1Q8TE82 1336 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 HEG1Q9ULI3 1381 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 A0A087WZG4 1122 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 KLF18A0A0U1RQI7 1052 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 M0R2C6 588 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 LMBR1LQ6UX01 489 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 AIFM3Q96NN9 605 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 AGXT2Q9BYV1 514 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 PARP3Q9Y6F1 533 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 MAST3O60307 1309 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
PPP4R1-222ENST00000582594 GOLGA8BA8MQT2 603 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 TBX22Q9Y458 520 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 MRC1P22897 1456 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 VWA3AA6NCI4 1184 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 GNG11P61952 73 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 PSME1Q06323 249 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms