RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 FKBP1AP62942 108 aaKnown RBP24.59■■□□□ 1.53
TOP3A-213ENST00000582230 ZNF512BQ96KM6 892 aaPredicted RBP24.59■■□□□ 1.53
TOP3A-213ENST00000582230 GPBP1L1Q9HC44 474 aaPredicted RBP24.59■■□□□ 1.53
TOP3A-213ENST00000582230 ARAP2Q8WZ64 1704 aa24.58■■□□□ 1.53
TOP3A-213ENST00000582230 IQCA1LA6NCM1 817 aa24.58■■□□□ 1.53
TOP3A-213ENST00000582230 SMARCA5O60264 1052 aaPredicted RBP24.58■■□□□ 1.53
TOP3A-213ENST00000582230 ARID4AP29374 1257 aaPredicted RBP24.58■■□□□ 1.53
TOP3A-213ENST00000582230 TTC39AQ5SRH9 613 aa24.58■■□□□ 1.53
TOP3A-213ENST00000582230 TBC1D22AQ8WUA7 517 aa24.58■■□□□ 1.53
TOP3A-213ENST00000582230 TLR7Q9NYK1 1049 aaKnown RBP24.58■■□□□ 1.53
TOP3A-213ENST00000582230 ZBTB12Q9Y330 459 aaPredicted RBP24.58■■□□□ 1.53
TOP3A-213ENST00000582230 LMOD1P29536 600 aaPredicted RBP24.57■■□□□ 1.52
TOP3A-213ENST00000582230 ANKRD45Q5TZF3 282 aa24.57■■□□□ 1.52
TOP3A-213ENST00000582230 ERICH6BQ5W0A0 696 aa24.57■■□□□ 1.52
TOP3A-213ENST00000582230 ZNF784Q8NCA9 323 aaPredicted RBP24.57■■□□□ 1.52
TOP3A-213ENST00000582230 WDR66Q8TBY9 1149 aa24.57■■□□□ 1.52
TOP3A-213ENST00000582230 VEGFAP15692 232 aaPredicted RBP24.56■■□□□ 1.52
TOP3A-213ENST00000582230 SCNN1DP51172 638 aa24.56■■□□□ 1.52
TOP3A-213ENST00000582230 CHAF1AQ13111 956 aaPredicted RBP24.56■■□□□ 1.52
TOP3A-213ENST00000582230 GMLQ99445 158 aa24.56■■□□□ 1.52
TOP3A-213ENST00000582230 BCL11AQ9H165 835 aa24.56■■□□□ 1.52
TOP3A-213ENST00000582230 GPRC5DQ9NZD1 345 aa24.56■■□□□ 1.52
TOP3A-213ENST00000582230 HACL1Q9UJ83 578 aa24.56■■□□□ 1.52
TOP3A-213ENST00000582230 PDS5AQ29RF7 1337 aaKnown RBP24.56■■□□□ 1.52
TOP3A-213ENST00000582230 SCN9AQ15858 1988 aa24.55■■□□□ 1.52
TOP3A-213ENST00000582230 MMP14P50281 582 aa24.55■■□□□ 1.52
TOP3A-213ENST00000582230 RASGRF1Q13972 1273 aa24.55■■□□□ 1.52
TOP3A-213ENST00000582230 MFSD14BQ5SR56 506 aa24.55■■□□□ 1.52
TOP3A-213ENST00000582230 RRAGCQ9HB90 399 aa24.55■■□□□ 1.52
TOP3A-213ENST00000582230 MXD3Q9BW11 206 aa24.54■■□□□ 1.52
TOP3A-213ENST00000582230 NMRK2Q9NPI5 230 aa24.54■■□□□ 1.52
TOP3A-213ENST00000582230 CNOT7Q9UIV1 285 aaKnown RBP24.54■■□□□ 1.52
TOP3A-213ENST00000582230 JAG2Q9Y219 1238 aa24.54■■□□□ 1.52
TOP3A-213ENST00000582230 WDR90Q96KV7 1748 aa24.54■■□□□ 1.52
TOP3A-213ENST00000582230 POTECB2RU33 542 aa24.53■■□□□ 1.52
TOP3A-213ENST00000582230 H7C1D1 291 aa24.53■■□□□ 1.52
TOP3A-213ENST00000582230 USP17L8P0C7I0 530 aa24.53■■□□□ 1.52
TOP3A-213ENST00000582230 CERS5Q8N5B7 392 aa24.53■■□□□ 1.52
TOP3A-213ENST00000582230 SPATA5Q8NB90 893 aa24.53■■□□□ 1.52
TOP3A-213ENST00000582230 SUGT1Q9Y2Z0 365 aa24.53■■□□□ 1.52
TOP3A-213ENST00000582230 MICALL2Q8IY33 904 aa24.52■■□□□ 1.52
TOP3A-213ENST00000582230 OGFOD1Q8N543 542 aa24.52■■□□□ 1.52
TOP3A-213ENST00000582230 ZGPATQ8N5A5 531 aaKnown RBP24.52■■□□□ 1.52
TOP3A-213ENST00000582230 HMG20BQ9P0W2 317 aa24.52■■□□□ 1.52
TOP3A-213ENST00000582230 SALL1Q9NSC2 1324 aa24.52■■□□□ 1.52
TOP3A-213ENST00000582230 EPS15P42566 896 aa24.51■■□□□ 1.51
TOP3A-213ENST00000582230 MCAMP43121 646 aa24.51■■□□□ 1.51
TOP3A-213ENST00000582230 NUCB1Q02818 461 aa24.51■■□□□ 1.51
TOP3A-213ENST00000582230 B4GALNT3Q6L9W6 998 aa24.51■■□□□ 1.51
TOP3A-213ENST00000582230 GPATCH3Q96I76 525 aa24.51■■□□□ 1.51
TOP3A-213ENST00000582230 PSME4Q14997 1843 aa24.51■■□□□ 1.51
TOP3A-213ENST00000582230 EPHX2P34913 555 aa24.5■■□□□ 1.51
TOP3A-213ENST00000582230 ZNF280AP59817 542 aaPredicted RBP24.5■■□□□ 1.51
TOP3A-213ENST00000582230 SCARF1Q14162 830 aa24.5■■□□□ 1.51
TOP3A-213ENST00000582230 CHD1LQ86WJ1 897 aa24.5■■□□□ 1.51
TOP3A-213ENST00000582230 KIAA0825Q8IV33 1275 aa24.5■■□□□ 1.51
TOP3A-213ENST00000582230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.5■■□□□ 1.51
TOP3A-213ENST00000582230 TAF1DQ9H5J8 278 aaPredicted RBP24.5■■□□□ 1.51
TOP3A-213ENST00000582230 ADARB2Q9NS39 739 aaKnown RBP24.5■■□□□ 1.51
TOP3A-213ENST00000582230 HDAC9Q9UKV0 1011 aa24.5■■□□□ 1.51
TOP3A-213ENST00000582230 COL1A1P02452 1464 aaPredicted RBP24.5■■□□□ 1.51
TOP3A-213ENST00000582230 PNMA8AQ86V59 439 aaPredicted RBP24.49■■□□□ 1.51
TOP3A-213ENST00000582230 ATP5JP18859 108 aa24.48■■□□□ 1.51
TOP3A-213ENST00000582230 SPTY2D1Q68D10 685 aaPredicted RBP24.48■■□□□ 1.51
TOP3A-213ENST00000582230 ECHDC1Q9NTX5 307 aa24.48■■□□□ 1.51
TOP3A-213ENST00000582230 PI16Q6UXB8 463 aa24.47■■□□□ 1.51
TOP3A-213ENST00000582230 USP50Q70EL3 339 aaPredicted RBP24.47■■□□□ 1.51
TOP3A-213ENST00000582230 C16orf71Q8IYS4 520 aaPredicted RBP24.47■■□□□ 1.51
TOP3A-213ENST00000582230 CCDC136Q96JN2 1154 aa24.47■■□□□ 1.51
TOP3A-213ENST00000582230 LNPKQ9C0E8 428 aa24.47■■□□□ 1.51
TOP3A-213ENST00000582230 MAST3O60307 1309 aa24.46■■□□□ 1.51
TOP3A-213ENST00000582230 TTC41PQ6P2S7 1318 aa24.46■■□□□ 1.51
TOP3A-213ENST00000582230 F8W031 263 aaPredicted RBP24.46■■□□□ 1.51
TOP3A-213ENST00000582230 LDHBP07195 334 aaKnown RBP24.46■■□□□ 1.51
TOP3A-213ENST00000582230 SNRKQ9NRH2 765 aa24.46■■□□□ 1.51
TOP3A-213ENST00000582230 TTF2Q9UNY4 1162 aaKnown RBP24.46■■□□□ 1.51
TOP3A-213ENST00000582230 SCN4AP35499 1836 aa24.46■■□□□ 1.51
TOP3A-213ENST00000582230 ZNF646O15015 1829 aaPredicted RBP24.45■■□□□ 1.5
TOP3A-213ENST00000582230 SHTN1A0MZ66 631 aa24.45■■□□□ 1.5
TOP3A-213ENST00000582230 KIF3CO14782 793 aa24.45■■□□□ 1.5
TOP3A-213ENST00000582230 IGSF3O75054 1194 aa24.45■■□□□ 1.5
TOP3A-213ENST00000582230 ZAP70P43403 619 aa24.45■■□□□ 1.5
TOP3A-213ENST00000582230 HDLBPQ00341 1268 aaKnown RBP24.45■■□□□ 1.5
TOP3A-213ENST00000582230 CENPQQ7L2Z9 268 aaPredicted RBP24.45■■□□□ 1.5
TOP3A-213ENST00000582230 MRIQ9BWK5 157 aa24.45■■□□□ 1.5
TOP3A-213ENST00000582230 MYOZ2Q9NPC6 264 aa24.45■■□□□ 1.5
TOP3A-213ENST00000582230 ABCF2Q9UG63 623 aa24.45■■□□□ 1.5
TOP3A-213ENST00000582230 MX1P20591 662 aa24.44■■□□□ 1.5
TOP3A-213ENST00000582230 GRIK5Q16478 980 aa24.44■■□□□ 1.5
TOP3A-213ENST00000582230 SAMD7Q7Z3H4 446 aa24.44■■□□□ 1.5
TOP3A-213ENST00000582230 SERPINA10Q9UK55 444 aa24.44■■□□□ 1.5
TOP3A-213ENST00000582230 ERC2O15083 957 aa24.43■■□□□ 1.5
TOP3A-213ENST00000582230 CYP2E1P05181 493 aaPredicted RBP24.43■■□□□ 1.5
TOP3A-213ENST00000582230 PRDX5P30044 214 aa24.43■■□□□ 1.5
TOP3A-213ENST00000582230 KIF4BQ2VIQ3 1234 aa24.43■■□□□ 1.5
TOP3A-213ENST00000582230 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
TOP3A-213ENST00000582230 OTUD7AQ8TE49 926 aaPredicted RBP24.43■■□□□ 1.5
TOP3A-213ENST00000582230 PPP4R2Q9NY27 417 aa24.43■■□□□ 1.5
TOP3A-213ENST00000582230 SALL3Q9BXA9 1300 aa24.42■■□□□ 1.5
TOP3A-213ENST00000582230 TTF1Q15361 905 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms