RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 CEP126Q9P2H0 1117 aa16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 MED23Q9ULK4 1368 aa16.63■□□□□ 0.25
CSNK1D-220ENST00000581737 FAM155AB1AL88 458 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 UBE4AQ14139 1066 aa16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 ZC3H15Q8WU90 426 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 ZC3H12CQ9C0D7 883 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-220ENST00000581737 CASP8AP2Q9UKL3 1982 aa16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 TAF5LO75529 589 aa16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 PDE8BO95263 885 aa16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 HUNKP57058 714 aa16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 ERC1Q8IUD2 1116 aa16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 HELBQ8NG08 1087 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-220ENST00000581737 G3V3G9 751 aa16.6■□□□□ 0.25
CSNK1D-220ENST00000581737 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
CSNK1D-220ENST00000581737 C15orf52Q6ZUT6 534 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-220ENST00000581737 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
CSNK1D-220ENST00000581737 KCNQ5Q9NR82 932 aa16.6■□□□□ 0.25
CSNK1D-220ENST00000581737 ADM5C9JUS6 153 aa16.59■□□□□ 0.25
CSNK1D-220ENST00000581737 IFIT1P09914 478 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-220ENST00000581737 SOX10P56693 466 aa16.59■□□□□ 0.25
CSNK1D-220ENST00000581737 NOGQ13253 232 aa16.59■□□□□ 0.25
CSNK1D-220ENST00000581737 SIRT2Q8IXJ6 389 aa16.59■□□□□ 0.25
CSNK1D-220ENST00000581737 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
CSNK1D-220ENST00000581737 RIMBP2O15034 1052 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 SLC5A1P13866 664 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 TNIP1Q15025 636 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 ATP2B3Q16720 1220 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 TBC1D10BQ4KMP7 808 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 LPIN2Q92539 896 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 TSHZ2Q9NRE2 1034 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 PCDHB15Q9Y5E8 787 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 ARAP2Q8WZ64 1704 aa16.58■□□□□ 0.24
CSNK1D-220ENST00000581737 PSMD14O00487 310 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 KIF23Q02241 960 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 RGMBQ6NW40 437 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 ZNF804AQ7Z570 1209 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 COA1Q9GZY4 146 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 PCDH10Q9P2E7 1040 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
CSNK1D-220ENST00000581737 ASTN2O75129 1339 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-220ENST00000581737 H7C1D1 291 aa16.56■□□□□ 0.24
CSNK1D-220ENST00000581737 FGFR2P21802 821 aa16.56■□□□□ 0.24
CSNK1D-220ENST00000581737 TFCP2Q12800 502 aa16.56■□□□□ 0.24
CSNK1D-220ENST00000581737 CAVIN4Q5BKX8 364 aa16.56■□□□□ 0.24
CSNK1D-220ENST00000581737 GPR108Q9NPR9 543 aa16.56■□□□□ 0.24
CSNK1D-220ENST00000581737 RNF186Q9NXI6 227 aa16.56■□□□□ 0.24
CSNK1D-220ENST00000581737 ZNF609O15014 1411 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 PSME4Q14997 1843 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 ECE2O60344 883 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 TRPA1O75762 1119 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 RBM26Q5T8P6 1007 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 VPS37DQ86XT2 251 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
CSNK1D-220ENST00000581737 IRS2Q9Y4H2 1338 aa16.54■□□□□ 0.24
CSNK1D-220ENST00000581737 SNAP23O00161 211 aa16.54■□□□□ 0.24
CSNK1D-220ENST00000581737 SASH1O94885 1247 aa16.54■□□□□ 0.24
CSNK1D-220ENST00000581737 DOK7Q18PE1 504 aa16.54■□□□□ 0.24
CSNK1D-220ENST00000581737 DPF2Q92785 391 aa16.54■□□□□ 0.24
CSNK1D-220ENST00000581737 GBA2Q9HCG7 927 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-220ENST00000581737 A0A1B0GUL7 405 aa16.53■□□□□ 0.24
CSNK1D-220ENST00000581737 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-220ENST00000581737 KLRK1P26718 216 aa16.53■□□□□ 0.24
CSNK1D-220ENST00000581737 HIBADHP31937 336 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-220ENST00000581737 CSRNP1Q96S65 589 aa16.53■□□□□ 0.24
CSNK1D-220ENST00000581737 DCTPP1Q9H773 170 aa16.53■□□□□ 0.24
CSNK1D-220ENST00000581737 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
CSNK1D-220ENST00000581737 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.24
CSNK1D-220ENST00000581737 TNNI3KQ59H18 835 aa16.52■□□□□ 0.24
CSNK1D-220ENST00000581737 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
CSNK1D-220ENST00000581737 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
CSNK1D-220ENST00000581737 GNL3LQ9NVN8 582 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-220ENST00000581737 SAGE1Q9NXZ1 904 aa16.52■□□□□ 0.24
CSNK1D-220ENST00000581737 FPGT-TNNI3KV9GXZ4 949 aa16.52■□□□□ 0.24
CSNK1D-220ENST00000581737 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 GYG1P46976 350 aa16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 FBXO33Q7Z6M2 555 aa16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 FAM84BQ96KN1 310 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 NEUROD6Q96NK8 337 aa16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms