RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 C19orf57Q0VDD7 668 aa9.61□□□□□ -0.87
SMCHD1-207ENST00000581711 CPSF6Q16630 551 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMCHD1-207ENST00000581711 OGFOD2Q6N063 350 aa9.61□□□□□ -0.87
SMCHD1-207ENST00000581711 HHIPQ96QV1 700 aa9.61□□□□□ -0.87
SMCHD1-207ENST00000581711 OSBPL1AQ9BXW6 950 aa9.61□□□□□ -0.87
SMCHD1-207ENST00000581711 TRPA1O75762 1119 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 PRNPP04156 253 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 JAG1P78504 1218 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 TMEM132AQ24JP5 1023 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 NUTM2GQ5VZR2 741 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 CBLL1Q75N03 491 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 TMPRSS13Q9BYE2 586 aa9.6□□□□□ -0.87
SMCHD1-207ENST00000581711 CES1P23141 567 aa9.59□□□□□ -0.87
SMCHD1-207ENST00000581711 NFXL1Q6ZNB6 911 aa9.59□□□□□ -0.87
SMCHD1-207ENST00000581711 ATCAYQ86WG3 371 aa9.59□□□□□ -0.87
SMCHD1-207ENST00000581711 C12orf50Q8NA57 414 aaPredicted RBP9.59□□□□□ -0.87
SMCHD1-207ENST00000581711 ZNF777Q9ULD5 760 aaPredicted RBP9.59□□□□□ -0.87
SMCHD1-207ENST00000581711 TIAF1O95411 115 aa9.58□□□□□ -0.88
SMCHD1-207ENST00000581711 VSIG10LQ86VR7 867 aa9.58□□□□□ -0.88
SMCHD1-207ENST00000581711 SHISA5Q8N114 240 aa9.58□□□□□ -0.88
SMCHD1-207ENST00000581711 SMG8Q8ND04 991 aaKnown RBP9.58□□□□□ -0.88
SMCHD1-207ENST00000581711 FBXL18Q96ME1 805 aa9.58□□□□□ -0.88
SMCHD1-207ENST00000581711 SUGCTQ9HAC7 445 aa9.58□□□□□ -0.88
SMCHD1-207ENST00000581711 USP26Q9BXU7 913 aa9.57□□□□□ -0.88
SMCHD1-207ENST00000581711 CYP4F12Q9HCS2 524 aa9.57□□□□□ -0.88
SMCHD1-207ENST00000581711 FAM95CA0A1B0GW59 222 aa9.56□□□□□ -0.88
SMCHD1-207ENST00000581711 RPLP1P05386 114 aaKnown RBP9.56□□□□□ -0.88
SMCHD1-207ENST00000581711 TMEM164Q5U3C3 297 aa9.56□□□□□ -0.88
SMCHD1-207ENST00000581711 XKR5Q6UX68 686 aa9.56□□□□□ -0.88
SMCHD1-207ENST00000581711 TMEM102Q8N9M5 508 aaPredicted RBP9.56□□□□□ -0.88
SMCHD1-207ENST00000581711 METTL22Q9BUU2 404 aaPredicted RBP9.56□□□□□ -0.88
SMCHD1-207ENST00000581711 LOC100289279A0A1B0GTE1 492 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 SOX1O00570 391 aaPredicted RBP9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 IKBKEQ14164 716 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 NFKBIBQ15653 356 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 PAOXQ6QHF9 649 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 VN1R5Q7Z5H4 357 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 TP53INP2Q8IXH6 220 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 BSNDQ8WZ55 320 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 ASIC4Q96FT7 647 aa9.55□□□□□ -0.88
SMCHD1-207ENST00000581711 DLGAP3O95886 979 aa9.54□□□□□ -0.88
SMCHD1-207ENST00000581711 ITGB5P18084 799 aa9.54□□□□□ -0.88
SMCHD1-207ENST00000581711 POU5F2Q8N7G0 328 aa9.54□□□□□ -0.88
SMCHD1-207ENST00000581711 EDEM1Q92611 657 aa9.54□□□□□ -0.88
SMCHD1-207ENST00000581711 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
SMCHD1-207ENST00000581711 CHRDQ9H2X0 955 aa9.54□□□□□ -0.88
SMCHD1-207ENST00000581711 CYP26A1O43174 497 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 C8AP07357 584 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 DRD2P14416 443 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 USP11P51784 963 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 COL19A1Q14993 1142 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 CDPF1Q6NVV7 123 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 FBLIM1Q8WUP2 373 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 NXPE3Q969Y0 559 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 BSDC1Q9NW68 430 aaPredicted RBP9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 SEPT3Q9UH03 358 aa9.53□□□□□ -0.88
SMCHD1-207ENST00000581711 ADMP35318 185 aa9.52□□□□□ -0.89
SMCHD1-207ENST00000581711 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
SMCHD1-207ENST00000581711 DNM1Q05193 864 aaKnown RBP9.52□□□□□ -0.89
SMCHD1-207ENST00000581711 PMEPA1Q969W9 287 aa9.52□□□□□ -0.89
SMCHD1-207ENST00000581711 OSMRQ99650 979 aa9.52□□□□□ -0.89
SMCHD1-207ENST00000581711 ZKSCAN3Q9BRR0 538 aa9.52□□□□□ -0.89
SMCHD1-207ENST00000581711 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
SMCHD1-207ENST00000581711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 A6NHS1 94 aa9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 ATG7O95352 703 aa9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 PCSK2P16519 638 aa9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 ZAR1Q86SH2 424 aa9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 C2CD4AQ8NCU7 369 aaPredicted RBP9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 TBC1D32Q96NH3 1257 aa9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 SOX17Q9H6I2 414 aaPredicted RBP9.51□□□□□ -0.89
SMCHD1-207ENST00000581711 JUNBP17275 347 aaPredicted RBP9.5□□□□□ -0.89
SMCHD1-207ENST00000581711 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
SMCHD1-207ENST00000581711 EXOSC6Q5RKV6 272 aaKnown RBP9.5□□□□□ -0.89
SMCHD1-207ENST00000581711 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
SMCHD1-207ENST00000581711 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
SMCHD1-207ENST00000581711 PDGFAP04085 211 aa9.49□□□□□ -0.89
SMCHD1-207ENST00000581711 FLCNQ8NFG4 579 aa9.49□□□□□ -0.89
SMCHD1-207ENST00000581711 EZH1Q92800 747 aaPredicted RBP9.49□□□□□ -0.89
SMCHD1-207ENST00000581711 FAM170BA6NMN3 283 aa9.48□□□□□ -0.89
SMCHD1-207ENST00000581711 AGBL5Q8NDL9 886 aa9.48□□□□□ -0.89
SMCHD1-207ENST00000581711 TTC16Q8NEE8 873 aa9.48□□□□□ -0.89
SMCHD1-207ENST00000581711 GATA6Q92908 595 aa9.48□□□□□ -0.89
SMCHD1-207ENST00000581711 PAK6Q9NQU5 681 aaPredicted RBP9.48□□□□□ -0.89
SMCHD1-207ENST00000581711 EREGO14944 169 aa9.47□□□□□ -0.89
SMCHD1-207ENST00000581711 ESRRAP11474 423 aaPredicted RBP9.47□□□□□ -0.89
SMCHD1-207ENST00000581711 ATP2B4P23634 1241 aa9.47□□□□□ -0.89
SMCHD1-207ENST00000581711 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
SMCHD1-207ENST00000581711 HELQQ8TDG4 1101 aa9.47□□□□□ -0.89
SMCHD1-207ENST00000581711 ASAP3Q8TDY4 903 aa9.47□□□□□ -0.89
SMCHD1-207ENST00000581711 YIPF2Q9BWQ6 316 aa9.47□□□□□ -0.89
SMCHD1-207ENST00000581711 MZF1P28698 734 aaPredicted RBP9.46□□□□□ -0.9
SMCHD1-207ENST00000581711 KRTAP4-9Q9BYQ8 210 aa9.46□□□□□ -0.9
SMCHD1-207ENST00000581711 BHLHE41Q9C0J9 482 aaPredicted RBP9.46□□□□□ -0.9
SMCHD1-207ENST00000581711 EDN3P14138 238 aa9.45□□□□□ -0.9
SMCHD1-207ENST00000581711 GSTM4Q03013 218 aa9.45□□□□□ -0.9
SMCHD1-207ENST00000581711 NOM1Q5C9Z4 860 aaKnown RBP9.45□□□□□ -0.9
SMCHD1-207ENST00000581711 ADH5P11766 374 aa9.44□□□□□ -0.9
SMCHD1-207ENST00000581711 NRSN2Q9GZP1 204 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms