RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 F8W031 263 aaPredicted RBP16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 H7C1D1 291 aa16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 RPS12P25398 132 aaKnown RBP16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 RBM26Q5T8P6 1007 aaKnown RBP16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 KIAA0825Q8IV33 1275 aa16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 CCDC8Q9H0W5 538 aaPredicted RBP16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 ADAMTSL1Q8N6G6 1762 aa16.07■□□□□ 0.16
CDC42EP4-207ENST00000581045 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 TBC1D10BQ4KMP7 808 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 SAMD7Q7Z3H4 446 aa16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 AACSQ86V21 672 aa16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 CERS5Q8N5B7 392 aa16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 TRPM4Q8TD43 1214 aa16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 DBNDD2Q9BQY9 259 aa16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 GNL3LQ9NVN8 582 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 TLR7Q9NYK1 1049 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-207ENST00000581045 MYO3BQ8WXR4 1341 aa16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 SMARCA5O60264 1052 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 RAB11FIP3O75154 756 aa16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 MFSD14BQ5SR56 506 aa16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 DPF2Q92785 391 aa16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 GPR108Q9NPR9 543 aa16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 ADARB2Q9NS39 739 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-207ENST00000581045 FAM205AQ6ZU69 1335 aa16.04■□□□□ 0.16
CDC42EP4-207ENST00000581045 EGFRP00533 1210 aa16.04■□□□□ 0.16
CDC42EP4-207ENST00000581045 USP17L8P0C7I0 530 aa16.04■□□□□ 0.16
CDC42EP4-207ENST00000581045 TTC39AQ5SRH9 613 aa16.04■□□□□ 0.16
CDC42EP4-207ENST00000581045 GMLQ99445 158 aa16.04■□□□□ 0.16
CDC42EP4-207ENST00000581045 TOMM70O94826 608 aa16.03■□□□□ 0.16
CDC42EP4-207ENST00000581045 KIF4BQ2VIQ3 1234 aa16.03■□□□□ 0.16
CDC42EP4-207ENST00000581045 PNMA8AQ86V59 439 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP4-207ENST00000581045 CLASRPQ8N2M8 674 aaKnown RBP16.03■□□□□ 0.16
CDC42EP4-207ENST00000581045 LRRCC1Q9C099 1032 aa16.03■□□□□ 0.16
CDC42EP4-207ENST00000581045 DBNLQ9UJU6 430 aaKnown RBP16.03■□□□□ 0.16
CDC42EP4-207ENST00000581045 POLR2AP24928 1970 aaKnown RBP16.03■□□□□ 0.16
CDC42EP4-207ENST00000581045 AKAP11Q9UKA4 1901 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 MYO5AQ9Y4I1 1855 aaKnown RBP16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 AAMPQ13685 434 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 RASGRF1Q13972 1273 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 GRIK5Q16478 980 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 CCDC158Q5M9N0 1113 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 USP50Q70EL3 339 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 OGFOD1Q8N543 542 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 DCTPP1Q9H773 170 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 DENND2AQ9ULE3 1009 aa16.02■□□□□ 0.16
CDC42EP4-207ENST00000581045 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 IFIT2P09913 472 aaKnown RBP16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 SCARF1Q14162 830 aa16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 PI16Q6UXB8 463 aa16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 RBM46Q8TBY0 533 aaKnown RBP16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 MYOZ2Q9NPC6 264 aa16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 SNRKQ9NRH2 765 aa16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 HDAC9Q9UKV0 1011 aa16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 TTF2Q9UNY4 1162 aaKnown RBP16.01■□□□□ 0.15
CDC42EP4-207ENST00000581045 SEMA3EO15041 775 aa16■□□□□ 0.15
CDC42EP4-207ENST00000581045 RBM5P52756 815 aaKnown RBP eCLIP16■□□□□ 0.15
CDC42EP4-207ENST00000581045 ZNF280AP59817 542 aaPredicted RBP16■□□□□ 0.15
CDC42EP4-207ENST00000581045 FKBP1AP62942 108 aaKnown RBP16■□□□□ 0.15
CDC42EP4-207ENST00000581045 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
CDC42EP4-207ENST00000581045 CHADLQ6NUI6 762 aa16■□□□□ 0.15
CDC42EP4-207ENST00000581045 SMC1BQ8NDV3 1235 aa16■□□□□ 0.15
CDC42EP4-207ENST00000581045 WDR66Q8TBY9 1149 aa16■□□□□ 0.15
CDC42EP4-207ENST00000581045 TBC1D22AQ8WUA7 517 aa16■□□□□ 0.15
CDC42EP4-207ENST00000581045 ABCF2Q9UG63 623 aa16■□□□□ 0.15
CDC42EP4-207ENST00000581045 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
CDC42EP4-207ENST00000581045 ASTN2O75129 1339 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 UQCRFS1P1P0C7P4 283 aa15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 ARID4AP29374 1257 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 MCAMP43121 646 aa15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 HDAC1Q13547 482 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 SPATA5Q8NB90 893 aa15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 HMG20BQ9P0W2 317 aa15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 PCDHAC2Q9Y5I4 1007 aa15.99■□□□□ 0.15
CDC42EP4-207ENST00000581045 IGHDP01880 384 aa15.98■□□□□ 0.15
CDC42EP4-207ENST00000581045 PRDX5P30044 214 aa15.98■□□□□ 0.15
CDC42EP4-207ENST00000581045 CFAP100Q494V2 611 aa15.98■□□□□ 0.15
CDC42EP4-207ENST00000581045 RWDD1Q9H446 243 aaPredicted RBP15.98■□□□□ 0.15
CDC42EP4-207ENST00000581045 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
CDC42EP4-207ENST00000581045 NDUFB9Q9Y6M9 179 aa15.98■□□□□ 0.15
CDC42EP4-207ENST00000581045 LDHBP07195 334 aaKnown RBP15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 C1QTNF8P60827 252 aa15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 DLGAP5Q15398 846 aa15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 NBPF9Q3BBW0 867 aa15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 ANKRD45Q5TZF3 282 aa15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 TBC1D9Q6ZT07 1266 aa15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 GGA3Q9NZ52 723 aa15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 SCAF8Q9UPN6 1271 aaKnown RBP15.97■□□□□ 0.15
CDC42EP4-207ENST00000581045 NEFLP07196 543 aa15.96■□□□□ 0.15
CDC42EP4-207ENST00000581045 ZAP70P43403 619 aa15.96■□□□□ 0.15
CDC42EP4-207ENST00000581045 CRKP46108 304 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms