RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ATP2B4P23634 1241 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PRDX5P30044 214 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PTGER2P43116 358 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 DYNLL1P63167 89 aaKnown RBP7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ADCK5Q3MIX3 580 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MCMDC2Q4G0Z9 681 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CAVIN4Q5BKX8 364 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SLC9C2Q5TAH2 1124 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CREB3L3Q68CJ9 461 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 NOL8Q76FK4 1167 aaKnown RBP7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SPRYD3Q8NCJ5 442 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 NKX2-3Q8TAU0 364 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RUFY2Q8WXA3 655 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 APPBP2Q92624 585 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SGIP1Q9BQI5 828 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 UPF3BQ9BZI7 483 aaKnown RBP7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ARMT1Q9H993 441 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 KCNQ5Q9NR82 932 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PODXL2Q9NZ53 605 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ABCF2Q9UG63 623 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SMIM22K7EJ46 135 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 GPAA1O43292 621 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 DTNBO60941 627 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 FRAT2O75474 233 aaPredicted RBP7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MBD4O95243 580 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CYP7A1P22680 504 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 HSPA4P34932 840 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 DPP8Q6V1X1 898 aaPredicted RBP7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 KIAA1211Q6ZU35 1233 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 C15orf52Q6ZUT6 534 aaKnown RBP7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 STOX1Q6ZVD7 989 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 LCORLQ8N3X6 602 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MPNDQ8N594 471 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 NLGN2Q8NFZ4 835 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 TDRD7Q8NHU6 1098 aaKnown RBP7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SLC16A10Q8TF71 515 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MAP4K1Q92918 833 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 FBXW7Q969H0 707 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 LARP6Q9BRS8 491 aaKnown RBP7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MTFR1LQ9H019 292 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 EPB41L4AQ9HCS5 686 aaPredicted RBP7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CD209Q9NNX6 404 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 HELLSQ9NRZ9 838 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 FOXD4L1Q9NU39 408 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 GNL3LQ9NVN8 582 aaKnown RBP7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RAI14Q9P0K7 980 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 LRP2BPQ9P2M1 347 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 DUOX1Q9NRD9 1551 aa7.4□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SNED1Q8TER0 1413 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 HSPD1P10809 573 aaKnown RBP7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 ALDH1B1P30837 517 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 HAND2P61296 217 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 MECOMQ03112 1051 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 EVX2Q03828 476 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 NECTIN1Q15223 517 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 DIXDC1Q155Q3 683 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 AOC3Q16853 763 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 ZNF804AQ7Z570 1209 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 CERS5Q8N5B7 392 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 KCNB2Q92953 911 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 TCEANC2Q96MN5 208 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 DBNDD1Q9H9R9 158 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 TACC3Q9Y6A5 838 aa7.39□□□□□ -1.23
RNU4ATAC-201ENST00000580972 COL11A2P13942 1736 aaPredicted RBP7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 NRXN2Q9P2S2 1712 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 MCCP23508 829 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 POLD1P28340 1107 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 GTF2IP78347 998 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 RABEP1Q15276 862 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 TTF1Q15361 905 aaPredicted RBP7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 UBE3CQ15386 1083 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 TTLL6Q8N841 843 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 CNKSR1Q969H4 720 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 NSUN4Q96CB9 384 aaKnown RBP7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 DDRGK1Q96HY6 314 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 JAKMIP1Q96N16 626 aaKnown RBP7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 STRBPQ96SI9 672 aaKnown RBP7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 INCENPQ9NQS7 918 aa7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 ZNF277Q9NRM2 450 aaPredicted RBP7.38□□□□□ -1.23
RNU4ATAC-201ENST00000580972 CYP2D7A0A087X1C5 515 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 F8W031 263 aaPredicted RBP7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 SEMA3EO15041 775 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 ZFYP08048 801 aaPredicted RBP7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 CYP21A2P08686 494 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 CYP2D6P10635 497 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 IL1R1P14778 569 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 NEK4P51957 841 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 NAA16Q6N069 864 aaPredicted RBP7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 ERICH6Q7L0X2 663 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 TBC1D10CQ8IV04 446 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 STK11IPQ8N1F8 1099 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 SDR42E1Q8WUS8 393 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 IL17RAQ96F46 866 aa7.37□□□□□ -1.23
RNU4ATAC-201ENST00000580972 RIOK1Q9BRS2 568 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms