RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 HDAC9Q9UKV0 1011 aa33.47■■■□□ 2.95
LINC00271-207ENST00000580741 IQSEC3Q9UPP2 1182 aaPredicted RBP33.47■■■□□ 2.95
LINC00271-207ENST00000580741 WNT10BO00744 389 aa33.46■■■□□ 2.95
LINC00271-207ENST00000580741 PUM3Q15397 648 aaKnown RBP33.46■■■□□ 2.95
LINC00271-207ENST00000580741 HSPA1AP0DMV8 641 aaKnown RBP33.45■■■□□ 2.95
LINC00271-207ENST00000580741 HSPA1BP0DMV9 641 aaKnown RBP33.45■■■□□ 2.95
LINC00271-207ENST00000580741 FGFR2P21802 821 aa33.45■■■□□ 2.95
LINC00271-207ENST00000580741 GRM1Q13255 1194 aa33.45■■■□□ 2.95
LINC00271-207ENST00000580741 FBXO33Q7Z6M2 555 aa33.45■■■□□ 2.95
LINC00271-207ENST00000580741 SAPCD2Q86UD0 394 aa33.45■■■□□ 2.95
LINC00271-207ENST00000580741 VPS37DQ86XT2 251 aa33.45■■■□□ 2.95
LINC00271-207ENST00000580741 CYP4F22Q6NT55 531 aa33.44■■■□□ 2.94
LINC00271-207ENST00000580741 FAM205AQ6ZU69 1335 aa33.44■■■□□ 2.94
LINC00271-207ENST00000580741 BCAMP50895 628 aa33.43■■■□□ 2.94
LINC00271-207ENST00000580741 CAVIN4Q5BKX8 364 aa33.43■■■□□ 2.94
LINC00271-207ENST00000580741 FTSJ3Q8IY81 847 aaKnown RBP33.43■■■□□ 2.94
LINC00271-207ENST00000580741 CDCA5Q96FF9 252 aa33.43■■■□□ 2.94
LINC00271-207ENST00000580741 PCDHAC2Q9Y5I4 1007 aa33.43■■■□□ 2.94
LINC00271-207ENST00000580741 WDR33Q9C0J8 1336 aaKnown RBP33.43■■■□□ 2.94
LINC00271-207ENST00000580741 SRGAP3O43295 1099 aa33.42■■■□□ 2.94
LINC00271-207ENST00000580741 CIAO1O76071 339 aa33.42■■■□□ 2.94
LINC00271-207ENST00000580741 GNAI2P04899 355 aa33.42■■■□□ 2.94
LINC00271-207ENST00000580741 IFIT1P09914 478 aaKnown RBP33.42■■■□□ 2.94
LINC00271-207ENST00000580741 RLBP1P12271 317 aa33.42■■■□□ 2.94
LINC00271-207ENST00000580741 FKBP1AP62942 108 aaKnown RBP33.42■■■□□ 2.94
LINC00271-207ENST00000580741 CAPNS2Q96L46 248 aa33.42■■■□□ 2.94
LINC00271-207ENST00000580741 PITPNM2Q9BZ72 1349 aa33.42■■■□□ 2.94
LINC00271-207ENST00000580741 CHAF1AQ13111 956 aaPredicted RBP33.41■■■□□ 2.94
LINC00271-207ENST00000580741 MFSD14BQ5SR56 506 aa33.41■■■□□ 2.94
LINC00271-207ENST00000580741 DZIP1LQ8IYY4 767 aaKnown RBP33.41■■■□□ 2.94
LINC00271-207ENST00000580741 COPRSQ9NQ92 184 aa33.41■■■□□ 2.94
LINC00271-207ENST00000580741 FBXO3Q9UK99 471 aa33.41■■■□□ 2.94
LINC00271-207ENST00000580741 MMP14P50281 582 aa33.4■■■□□ 2.94
LINC00271-207ENST00000580741 ZBED3Q96IU2 234 aaPredicted RBP33.4■■■□□ 2.94
LINC00271-207ENST00000580741 CEP126Q9P2H0 1117 aa33.4■■■□□ 2.94
LINC00271-207ENST00000580741 SLC5A1P13866 664 aa33.39■■■□□ 2.94
LINC00271-207ENST00000580741 DLGAP5Q15398 846 aa33.39■■■□□ 2.94
LINC00271-207ENST00000580741 LPIN2Q92539 896 aa33.39■■■□□ 2.94
LINC00271-207ENST00000580741 GBA2Q9HCG7 927 aaPredicted RBP33.39■■■□□ 2.94
LINC00271-207ENST00000580741 FRAT2O75474 233 aaPredicted RBP33.38■■■□□ 2.93
LINC00271-207ENST00000580741 IL15P40933 162 aaPredicted RBP33.38■■■□□ 2.93
LINC00271-207ENST00000580741 MTX1Q13505 466 aa33.38■■■□□ 2.93
LINC00271-207ENST00000580741 ITPRIPQ8IWB1 547 aa33.38■■■□□ 2.93
LINC00271-207ENST00000580741 HUNKP57058 714 aa33.37■■■□□ 2.93
LINC00271-207ENST00000580741 ATP2B3Q16720 1220 aa33.37■■■□□ 2.93
LINC00271-207ENST00000580741 CFAP100Q494V2 611 aa33.37■■■□□ 2.93
LINC00271-207ENST00000580741 PRAMEF18Q5VWM3 479 aa33.37■■■□□ 2.93
LINC00271-207ENST00000580741 ECE1P42892 770 aa33.36■■■□□ 2.93
LINC00271-207ENST00000580741 PNMA6EA0A0J9YXQ4 647 aa33.35■■■□□ 2.93
LINC00271-207ENST00000580741 GRIK5Q16478 980 aa33.35■■■□□ 2.93
LINC00271-207ENST00000580741 C2orf69Q8N8R5 385 aa33.35■■■□□ 2.93
LINC00271-207ENST00000580741 C1orf115Q9H7X2 142 aa33.35■■■□□ 2.93
LINC00271-207ENST00000580741 MTMR14Q8NCE2 650 aa33.34■■■□□ 2.93
LINC00271-207ENST00000580741 TTF2Q9UNY4 1162 aaKnown RBP33.34■■■□□ 2.93
LINC00271-207ENST00000580741 AOX1Q06278 1338 aa33.33■■■□□ 2.93
LINC00271-207ENST00000580741 RBM5P52756 815 aaKnown RBP eCLIP33.33■■■□□ 2.93
LINC00271-207ENST00000580741 SPDYE2BA6NHP3 402 aa33.32■■■□□ 2.92
LINC00271-207ENST00000580741 AOC2O75106 756 aa33.32■■■□□ 2.92
LINC00271-207ENST00000580741 SPDYE6P0CI01 402 aa33.32■■■□□ 2.92
LINC00271-207ENST00000580741 PANK1Q8TE04 598 aa33.32■■■□□ 2.92
LINC00271-207ENST00000580741 HHIPL1Q96JK4 782 aa33.32■■■□□ 2.92
LINC00271-207ENST00000580741 PRMT6Q96LA8 375 aaPredicted RBP33.32■■■□□ 2.92
LINC00271-207ENST00000580741 CLRN2A0PK11 232 aa33.31■■■□□ 2.92
LINC00271-207ENST00000580741 APOBEC3FQ8IUX4 373 aaKnown RBP33.31■■■□□ 2.92
LINC00271-207ENST00000580741 ARAP2Q8WZ64 1704 aa33.3■■■□□ 2.92
LINC00271-207ENST00000580741 ADORA1P30542 326 aa33.29■■■□□ 2.92
LINC00271-207ENST00000580741 TFCP2Q12800 502 aa33.29■■■□□ 2.92
LINC00271-207ENST00000580741 TBC1D22AQ8WUA7 517 aa33.29■■■□□ 2.92
LINC00271-207ENST00000580741 ZBTB7BO15156 539 aaPredicted RBP33.28■■■□□ 2.92
LINC00271-207ENST00000580741 FOXN1O15353 648 aa33.28■■■□□ 2.92
LINC00271-207ENST00000580741 MOB2Q70IA6 237 aa33.28■■■□□ 2.92
LINC00271-207ENST00000580741 WBP1LQ9NX94 342 aa33.28■■■□□ 2.92
LINC00271-207ENST00000580741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.28■■■□□ 2.92
LINC00271-207ENST00000580741 COL1A1P02452 1464 aaPredicted RBP33.28■■■□□ 2.92
LINC00271-207ENST00000580741 THSD7BQ9C0I4 1608 aa33.28■■■□□ 2.92
LINC00271-207ENST00000580741 VEZTQ9HBM0 779 aa33.27■■■□□ 2.92
LINC00271-207ENST00000580741 PHKA1P46020 1223 aa33.26■■■□□ 2.91
LINC00271-207ENST00000580741 TIMM10P62072 90 aa33.26■■■□□ 2.91
LINC00271-207ENST00000580741 RGMBQ6NW40 437 aa33.26■■■□□ 2.91
LINC00271-207ENST00000580741 SERPINA10Q9UK55 444 aa33.26■■■□□ 2.91
LINC00271-207ENST00000580741 RCAN3Q9UKA8 241 aa33.26■■■□□ 2.91
LINC00271-207ENST00000580741 MYO1BO43795 1136 aa33.25■■■□□ 2.91
LINC00271-207ENST00000580741 CRKP46108 304 aa33.25■■■□□ 2.91
LINC00271-207ENST00000580741 AIDAQ96BJ3 306 aa33.25■■■□□ 2.91
LINC00271-207ENST00000580741 DEFB129Q9H1M3 183 aa33.24■■■□□ 2.91
LINC00271-207ENST00000580741 ZNF157P51786 506 aaPredicted RBP33.23■■■□□ 2.91
LINC00271-207ENST00000580741 ATP8B2P98198 1209 aa33.23■■■□□ 2.91
LINC00271-207ENST00000580741 MAP2K1Q02750 393 aaPredicted RBP33.23■■■□□ 2.91
LINC00271-207ENST00000580741 G3BP1Q13283 466 aaKnown RBP eCLIP33.23■■■□□ 2.91
LINC00271-207ENST00000580741 ZIC5Q96T25 663 aa33.23■■■□□ 2.91
LINC00271-207ENST00000580741 PAPPA2Q9BXP8 1791 aa33.23■■■□□ 2.91
LINC00271-207ENST00000580741 A0A1B0GUL7 405 aa33.22■■■□□ 2.91
LINC00271-207ENST00000580741 TTLL12Q14166 644 aaPredicted RBP33.22■■■□□ 2.91
LINC00271-207ENST00000580741 POLA2Q14181 598 aa33.22■■■□□ 2.91
LINC00271-207ENST00000580741 COL13A1Q5TAT6 717 aaPredicted RBP33.22■■■□□ 2.91
LINC00271-207ENST00000580741 TDRD3Q9H7E2 651 aaKnown RBP33.22■■■□□ 2.91
LINC00271-207ENST00000580741 GNL3LQ9NVN8 582 aaKnown RBP33.22■■■□□ 2.91
LINC00271-207ENST00000580741 ECM29Q5VYK3 1845 aa33.21■■■□□ 2.91
LINC00271-207ENST00000580741 UBE2Q2LH0YL09 131 aa33.21■■■□□ 2.91
LINC00271-207ENST00000580741 MAP2K2P36507 400 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms