RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CFHR5Q9BXR6 569 aa16.92■□□□□ 0.3
TRAF4-214ENST00000580073 WTIPA6NIX2 430 aaPredicted RBP16.91■□□□□ 0.3
TRAF4-214ENST00000580073 VAMP4O75379 141 aa16.91■□□□□ 0.3
TRAF4-214ENST00000580073 IL1R1P14778 569 aa16.91■□□□□ 0.3
TRAF4-214ENST00000580073 KLRK1P26718 216 aa16.91■□□□□ 0.3
TRAF4-214ENST00000580073 INHBEP58166 350 aa16.91■□□□□ 0.3
TRAF4-214ENST00000580073 TNFAIP1Q13829 316 aa16.91■□□□□ 0.3
TRAF4-214ENST00000580073 MOB2Q70IA6 237 aa16.91■□□□□ 0.3
TRAF4-214ENST00000580073 ANGEL1Q9UNK9 670 aaKnown RBP16.91■□□□□ 0.3
TRAF4-214ENST00000580073 SCAF8Q9UPN6 1271 aaKnown RBP16.91■□□□□ 0.3
TRAF4-214ENST00000580073 MANSC4A6NHS7 340 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-214ENST00000580073 ZBTB48P10074 688 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-214ENST00000580073 SUPT20HL1Q3ZLR7 823 aa16.9■□□□□ 0.3
TRAF4-214ENST00000580073 PRAMEF18Q5VWM3 479 aa16.9■□□□□ 0.3
TRAF4-214ENST00000580073 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-214ENST00000580073 ZBED3Q96IU2 234 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-214ENST00000580073 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
TRAF4-214ENST00000580073 CNNM1Q9NRU3 951 aa16.9■□□□□ 0.3
TRAF4-214ENST00000580073 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-214ENST00000580073 GPR25O00155 361 aa16.89■□□□□ 0.29
TRAF4-214ENST00000580073 GRM8O00222 908 aa16.89■□□□□ 0.29
TRAF4-214ENST00000580073 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
TRAF4-214ENST00000580073 SOX10P56693 466 aa16.89■□□□□ 0.29
TRAF4-214ENST00000580073 EXOSC9Q06265 439 aaKnown RBP16.89■□□□□ 0.29
TRAF4-214ENST00000580073 MAP3K11Q16584 847 aa16.89■□□□□ 0.29
TRAF4-214ENST00000580073 BEND3Q5T5X7 828 aa16.89■□□□□ 0.29
TRAF4-214ENST00000580073 LDHAL6AQ6ZMR3 332 aa16.89■□□□□ 0.29
TRAF4-214ENST00000580073 FKTNO75072 461 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 IREB2P48200 963 aaKnown RBP16.88■□□□□ 0.29
TRAF4-214ENST00000580073 FOXO4P98177 505 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 PTPN12Q05209 780 aaKnown RBP16.88■□□□□ 0.29
TRAF4-214ENST00000580073 MKRN3Q13064 507 aaKnown RBP16.88■□□□□ 0.29
TRAF4-214ENST00000580073 PRKG1Q13976 671 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 SPRYD7Q5W111 196 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 FBXO46Q6PJ61 603 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-214ENST00000580073 HPS5Q9UPZ3 1129 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 IRS2Q9Y4H2 1338 aa16.88■□□□□ 0.29
TRAF4-214ENST00000580073 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
TRAF4-214ENST00000580073 TAF5LO75529 589 aa16.87■□□□□ 0.29
TRAF4-214ENST00000580073 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
TRAF4-214ENST00000580073 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
TRAF4-214ENST00000580073 LDLRAD1Q5T700 205 aa16.87■□□□□ 0.29
TRAF4-214ENST00000580073 LMBR1LQ6UX01 489 aa16.87■□□□□ 0.29
TRAF4-214ENST00000580073 SLC10A4Q96EP9 437 aa16.87■□□□□ 0.29
TRAF4-214ENST00000580073 SSC5DA1L4H1 1573 aa16.86■□□□□ 0.29
TRAF4-214ENST00000580073 F6X3S4 739 aa16.86■□□□□ 0.29
TRAF4-214ENST00000580073 F8W031 263 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-214ENST00000580073 RBM5P52756 815 aaKnown RBP eCLIP16.86■□□□□ 0.29
TRAF4-214ENST00000580073 UBE4AQ14139 1066 aa16.86■□□□□ 0.29
TRAF4-214ENST00000580073 CDCA7LQ96GN5 454 aa16.86■□□□□ 0.29
TRAF4-214ENST00000580073 SRCIN1Q9C0H9 1055 aa16.86■□□□□ 0.29
TRAF4-214ENST00000580073 VEZTQ9HBM0 779 aa16.86■□□□□ 0.29
TRAF4-214ENST00000580073 TNRC18O15417 2968 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-214ENST00000580073 CERS5Q8N5B7 392 aa16.85■□□□□ 0.29
TRAF4-214ENST00000580073 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-214ENST00000580073 WNK4Q96J92 1243 aa16.85■□□□□ 0.29
TRAF4-214ENST00000580073 FAM205AQ6ZU69 1335 aa16.85■□□□□ 0.29
TRAF4-214ENST00000580073 MROH5Q6ZUA9 1318 aa16.85■□□□□ 0.29
TRAF4-214ENST00000580073 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
TRAF4-214ENST00000580073 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
TRAF4-214ENST00000580073 ANKRD13AQ8IZ07 590 aa16.84■□□□□ 0.29
TRAF4-214ENST00000580073 SERPINA10Q9UK55 444 aa16.84■□□□□ 0.29
TRAF4-214ENST00000580073 CLRN2A0PK11 232 aa16.83■□□□□ 0.28
TRAF4-214ENST00000580073 PLIN1O60240 522 aa16.83■□□□□ 0.28
TRAF4-214ENST00000580073 TNNI2P48788 182 aa16.83■□□□□ 0.28
TRAF4-214ENST00000580073 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAF4-214ENST00000580073 AK9Q5TCS8 1911 aa16.83■□□□□ 0.28
TRAF4-214ENST00000580073 PRPF38BQ5VTL8 546 aaKnown RBP16.83■□□□□ 0.28
TRAF4-214ENST00000580073 VPS37DQ86XT2 251 aa16.83■□□□□ 0.28
TRAF4-214ENST00000580073 IFNL1Q8IU54 200 aa16.83■□□□□ 0.28
TRAF4-214ENST00000580073 MAST3O60307 1309 aa16.82■□□□□ 0.28
TRAF4-214ENST00000580073 HIBADHP31937 336 aaKnown RBP16.82■□□□□ 0.28
TRAF4-214ENST00000580073 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
TRAF4-214ENST00000580073 TBC1D22AQ8WUA7 517 aa16.82■□□□□ 0.28
TRAF4-214ENST00000580073 ERO1AQ96HE7 468 aa16.82■□□□□ 0.28
TRAF4-214ENST00000580073 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
TRAF4-214ENST00000580073 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
TRAF4-214ENST00000580073 CAVIN4Q5BKX8 364 aa16.81■□□□□ 0.28
TRAF4-214ENST00000580073 TRMT2AQ8IZ69 625 aaKnown RBP16.81■□□□□ 0.28
TRAF4-214ENST00000580073 ZNF594Q96JF6 807 aaPredicted RBP16.81■□□□□ 0.28
TRAF4-214ENST00000580073 PTPRCP08575 1304 aa16.8■□□□□ 0.28
TRAF4-214ENST00000580073 SNAP23O00161 211 aa16.8■□□□□ 0.28
TRAF4-214ENST00000580073 RASA3Q14644 834 aa16.8■□□□□ 0.28
TRAF4-214ENST00000580073 INTS3Q68E01 1043 aaKnown RBP16.8■□□□□ 0.28
TRAF4-214ENST00000580073 TDRD7Q8NHU6 1098 aaKnown RBP16.8■□□□□ 0.28
TRAF4-214ENST00000580073 HOOK2Q96ED9 719 aa16.8■□□□□ 0.28
TRAF4-214ENST00000580073 PRMT6Q96LA8 375 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-214ENST00000580073 TMOD2Q9NZR1 351 aa16.8■□□□□ 0.28
TRAF4-214ENST00000580073 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-214ENST00000580073 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-214ENST00000580073 ARHGEF6Q15052 776 aa16.79■□□□□ 0.28
TRAF4-214ENST00000580073 EPHA10Q5JZY3 1008 aa16.79■□□□□ 0.28
TRAF4-214ENST00000580073 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
TRAF4-214ENST00000580073 JAG2Q9Y219 1238 aa16.79■□□□□ 0.28
TRAF4-214ENST00000580073 TRIM17Q9Y577 477 aa16.79■□□□□ 0.28
TRAF4-214ENST00000580073 CSADQ9Y600 493 aa16.79■□□□□ 0.28
TRAF4-214ENST00000580073 UTYO14607 1347 aa16.78■□□□□ 0.28
TRAF4-214ENST00000580073 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms