RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.72■■■□□ 2.35
LIMD2-207ENST00000579329 LPIN2Q92539 896 aa29.72■■■□□ 2.35
LIMD2-207ENST00000579329 TMEM88BA6NKF7 163 aa29.71■■■□□ 2.35
LIMD2-207ENST00000579329 SASH1O94885 1247 aa29.71■■■□□ 2.35
LIMD2-207ENST00000579329 FKBP1AP62942 108 aaKnown RBP29.71■■■□□ 2.35
LIMD2-207ENST00000579329 C1orf115Q9H7X2 142 aa29.71■■■□□ 2.35
LIMD2-207ENST00000579329 MYOZ2Q9NPC6 264 aa29.71■■■□□ 2.35
LIMD2-207ENST00000579329 FAM205AQ6ZU69 1335 aa29.71■■■□□ 2.35
LIMD2-207ENST00000579329 HDAC9Q9UKV0 1011 aa29.7■■■□□ 2.35
LIMD2-207ENST00000579329 MVPQ14764 893 aaKnown RBP29.69■■■□□ 2.34
LIMD2-207ENST00000579329 ATP2B3Q16720 1220 aa29.69■■■□□ 2.34
LIMD2-207ENST00000579329 KIAA0825Q8IV33 1275 aa29.69■■■□□ 2.34
LIMD2-207ENST00000579329 PRDM10Q9NQV6 1147 aa29.69■■■□□ 2.34
LIMD2-207ENST00000579329 ATP8B2P98198 1209 aa29.68■■■□□ 2.34
LIMD2-207ENST00000579329 CDC37L1Q7L3B6 337 aa29.68■■■□□ 2.34
LIMD2-207ENST00000579329 CERS5Q8N5B7 392 aa29.68■■■□□ 2.34
LIMD2-207ENST00000579329 AIDAQ96BJ3 306 aa29.68■■■□□ 2.34
LIMD2-207ENST00000579329 GLIS2Q9BZE0 524 aaPredicted RBP29.68■■■□□ 2.34
LIMD2-207ENST00000579329 BCAMP50895 628 aa29.67■■■□□ 2.34
LIMD2-207ENST00000579329 POLA2Q14181 598 aa29.67■■■□□ 2.34
LIMD2-207ENST00000579329 DCPSQ96C86 337 aaKnown RBP29.67■■■□□ 2.34
LIMD2-207ENST00000579329 DDX19BQ9UMR2 479 aa29.67■■■□□ 2.34
LIMD2-207ENST00000579329 JAG2Q9Y219 1238 aa29.67■■■□□ 2.34
LIMD2-207ENST00000579329 COG6Q9Y2V7 657 aa29.67■■■□□ 2.34
LIMD2-207ENST00000579329 TRAF5O00463 557 aa29.66■■■□□ 2.34
LIMD2-207ENST00000579329 CTCFP49711 727 aaPredicted RBP29.66■■■□□ 2.34
LIMD2-207ENST00000579329 SSH3Q8TE77 659 aa29.66■■■□□ 2.34
LIMD2-207ENST00000579329 GGA3Q9NZ52 723 aa29.66■■■□□ 2.34
LIMD2-207ENST00000579329 FRAT2O75474 233 aaPredicted RBP29.65■■■□□ 2.34
LIMD2-207ENST00000579329 G3BP1Q13283 466 aaKnown RBP eCLIP29.65■■■□□ 2.34
LIMD2-207ENST00000579329 SCARF1Q14162 830 aa29.65■■■□□ 2.34
LIMD2-207ENST00000579329 IQSEC3Q9UPP2 1182 aaPredicted RBP29.65■■■□□ 2.34
LIMD2-207ENST00000579329 PDE3AQ14432 1141 aa29.64■■■□□ 2.34
LIMD2-207ENST00000579329 FMR1Q06787 632 aaKnown RBP eCLIP29.63■■■□□ 2.33
LIMD2-207ENST00000579329 TFCP2Q12800 502 aa29.63■■■□□ 2.33
LIMD2-207ENST00000579329 MFSD14BQ5SR56 506 aa29.63■■■□□ 2.33
LIMD2-207ENST00000579329 KRT26Q7Z3Y9 468 aa29.63■■■□□ 2.33
LIMD2-207ENST00000579329 USP48Q86UV5 1035 aa29.63■■■□□ 2.33
LIMD2-207ENST00000579329 CHMP4BQ9H444 224 aaKnown RBP29.63■■■□□ 2.33
LIMD2-207ENST00000579329 AKAP2Q9Y2D5 859 aa29.63■■■□□ 2.33
LIMD2-207ENST00000579329 ASTN2O75129 1339 aaPredicted RBP29.63■■■□□ 2.33
LIMD2-207ENST00000579329 ARAP2Q8WZ64 1704 aa29.62■■■□□ 2.33
LIMD2-207ENST00000579329 TRPM7Q96QT4 1865 aa29.62■■■□□ 2.33
LIMD2-207ENST00000579329 CHAF1AQ13111 956 aaPredicted RBP29.62■■■□□ 2.33
LIMD2-207ENST00000579329 WBP1LQ9NX94 342 aa29.62■■■□□ 2.33
LIMD2-207ENST00000579329 F8W031 263 aaPredicted RBP29.61■■■□□ 2.33
LIMD2-207ENST00000579329 ANGEL2Q5VTE6 544 aaKnown RBP29.61■■■□□ 2.33
LIMD2-207ENST00000579329 CEP85Q6P2H3 762 aa29.61■■■□□ 2.33
LIMD2-207ENST00000579329 SULF1Q8IWU6 871 aa29.61■■■□□ 2.33
LIMD2-207ENST00000579329 TBC1D22AQ8WUA7 517 aa29.61■■■□□ 2.33
LIMD2-207ENST00000579329 WNT10BO00744 389 aa29.6■■■□□ 2.33
LIMD2-207ENST00000579329 LBX1P52954 281 aa29.6■■■□□ 2.33
LIMD2-207ENST00000579329 GNL3LQ9NVN8 582 aaKnown RBP29.6■■■□□ 2.33
LIMD2-207ENST00000579329 PITPNM2Q9BZ72 1349 aa29.6■■■□□ 2.33
LIMD2-207ENST00000579329 RASSF10A6NK89 507 aa29.59■■■□□ 2.33
LIMD2-207ENST00000579329 NBPF9Q3BBW0 867 aa29.59■■■□□ 2.33
LIMD2-207ENST00000579329 A0A1B0GUL7 405 aa29.58■■■□□ 2.33
LIMD2-207ENST00000579329 ADM5C9JUS6 153 aa29.58■■■□□ 2.33
LIMD2-207ENST00000579329 OS9Q13438 667 aaPredicted RBP29.58■■■□□ 2.33
LIMD2-207ENST00000579329 DLGAP5Q15398 846 aa29.58■■■□□ 2.33
LIMD2-207ENST00000579329 DEFB115Q30KQ5 88 aa29.58■■■□□ 2.33
LIMD2-207ENST00000579329 C20orf194Q5TEA3 1177 aa29.58■■■□□ 2.33
LIMD2-207ENST00000579329 ZBTB40Q9NUA8 1239 aa29.58■■■□□ 2.33
LIMD2-207ENST00000579329 SURF6O75683 361 aaKnown RBP29.57■■■□□ 2.32
LIMD2-207ENST00000579329 CELF2O95319 508 aaKnown RBP29.57■■■□□ 2.32
LIMD2-207ENST00000579329 ADORA1P30542 326 aa29.57■■■□□ 2.32
LIMD2-207ENST00000579329 CST9Q5W186 159 aa29.57■■■□□ 2.32
LIMD2-207ENST00000579329 MTMR14Q8NCE2 650 aa29.57■■■□□ 2.32
LIMD2-207ENST00000579329 ZBED3Q96IU2 234 aaPredicted RBP29.57■■■□□ 2.32
LIMD2-207ENST00000579329 POLR2AP24928 1970 aaKnown RBP29.56■■■□□ 2.32
LIMD2-207ENST00000579329 MYH13Q9UKX3 1938 aa29.56■■■□□ 2.32
LIMD2-207ENST00000579329 TIMM10P62072 90 aa29.56■■■□□ 2.32
LIMD2-207ENST00000579329 ZNF408Q9H9D4 720 aa29.56■■■□□ 2.32
LIMD2-207ENST00000579329 ABT1Q9ULW3 272 aaKnown RBP29.56■■■□□ 2.32
LIMD2-207ENST00000579329 TTF2Q9UNY4 1162 aaKnown RBP29.56■■■□□ 2.32
LIMD2-207ENST00000579329 NOP58Q9Y2X3 529 aaKnown RBP29.56■■■□□ 2.32
LIMD2-207ENST00000579329 SEMA3EO15041 775 aa29.55■■■□□ 2.32
LIMD2-207ENST00000579329 PHKA1P46020 1223 aa29.55■■■□□ 2.32
LIMD2-207ENST00000579329 CFAP100Q494V2 611 aa29.55■■■□□ 2.32
LIMD2-207ENST00000579329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.55■■■□□ 2.32
LIMD2-207ENST00000579329 WDR33Q9C0J8 1336 aaKnown RBP29.54■■■□□ 2.32
LIMD2-207ENST00000579329 CCDC102BQ68D86 513 aa29.54■■■□□ 2.32
LIMD2-207ENST00000579329 WDR66Q8TBY9 1149 aa29.54■■■□□ 2.32
LIMD2-207ENST00000579329 XAGE2Q96GT9 111 aa29.54■■■□□ 2.32
LIMD2-207ENST00000579329 COL1A1P02452 1464 aaPredicted RBP29.54■■■□□ 2.32
LIMD2-207ENST00000579329 ZBTB22O15209 634 aa29.53■■■□□ 2.32
LIMD2-207ENST00000579329 HSPA8P11142 646 aaKnown RBP29.53■■■□□ 2.32
LIMD2-207ENST00000579329 RPAP2Q8IXW5 612 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-207ENST00000579329 NEUROD6Q96NK8 337 aa29.53■■■□□ 2.32
LIMD2-207ENST00000579329 GPR108Q9NPR9 543 aa29.53■■■□□ 2.32
LIMD2-207ENST00000579329 DENND2AQ9ULE3 1009 aa29.53■■■□□ 2.32
LIMD2-207ENST00000579329 SUGT1Q9Y2Z0 365 aa29.53■■■□□ 2.32
LIMD2-207ENST00000579329 RBM5P52756 815 aaKnown RBP eCLIP29.52■■■□□ 2.32
LIMD2-207ENST00000579329 DLK2Q6UY11 383 aa29.52■■■□□ 2.32
LIMD2-207ENST00000579329 SERPINA10Q9UK55 444 aa29.52■■■□□ 2.32
LIMD2-207ENST00000579329 THSD7BQ9C0I4 1608 aa29.52■■■□□ 2.32
LIMD2-207ENST00000579329 SPDYE2BA6NHP3 402 aa29.51■■■□□ 2.31
LIMD2-207ENST00000579329 SPDYE6P0CI01 402 aa29.51■■■□□ 2.31
LIMD2-207ENST00000579329 GRIK5Q16478 980 aa29.51■■■□□ 2.31
LIMD2-207ENST00000579329 APOBEC3FQ8IUX4 373 aaKnown RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms