RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 GREM2Q9H772 168 aa11.24□□□□□ -0.61
BRIP1-204ENST00000579028 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
BRIP1-204ENST00000579028 DDX58O95786 925 aaKnown RBP11.23□□□□□ -0.61
BRIP1-204ENST00000579028 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 GJA5P36382 358 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 GTF2IP78347 998 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 CAP1Q01518 475 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 RALBP1Q15311 655 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 DLGAP5Q15398 846 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 TMEM106CQ9BVX2 250 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 ZNF804BA4D1E1 1349 aa11.23□□□□□ -0.61
BRIP1-204ENST00000579028 KIAA0100Q14667 2235 aaKnown RBP11.23□□□□□ -0.61
BRIP1-204ENST00000579028 IGKV5-2P06315 115 aa11.22□□□□□ -0.61
BRIP1-204ENST00000579028 KLRK1P26718 216 aa11.22□□□□□ -0.61
BRIP1-204ENST00000579028 HTTP42858 3142 aa11.22□□□□□ -0.61
BRIP1-204ENST00000579028 MKI67P46013 3256 aaKnown RBP11.22□□□□□ -0.61
BRIP1-204ENST00000579028 SUPT20HL1Q3ZLR7 823 aa11.22□□□□□ -0.61
BRIP1-204ENST00000579028 PTPN18Q99952 460 aa11.22□□□□□ -0.61
BRIP1-204ENST00000579028 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
BRIP1-204ENST00000579028 USP2O75604 605 aaPredicted RBP11.21□□□□□ -0.61
BRIP1-204ENST00000579028 IGHMBP2P38935 993 aaKnown RBP11.21□□□□□ -0.61
BRIP1-204ENST00000579028 IREB2P48200 963 aaKnown RBP11.21□□□□□ -0.61
BRIP1-204ENST00000579028 ANKRD13AQ8IZ07 590 aa11.21□□□□□ -0.61
BRIP1-204ENST00000579028 CERS5Q8N5B7 392 aa11.21□□□□□ -0.61
BRIP1-204ENST00000579028 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
BRIP1-204ENST00000579028 ANKRD2Q9GZV1 360 aa11.21□□□□□ -0.61
BRIP1-204ENST00000579028 CD209Q9NNX6 404 aa11.21□□□□□ -0.61
BRIP1-204ENST00000579028 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
BRIP1-204ENST00000579028 OTOFQ9HC10 1997 aa11.21□□□□□ -0.62
BRIP1-204ENST00000579028 IRS2Q9Y4H2 1338 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 ELL2O00472 640 aaPredicted RBP11.2□□□□□ -0.62
BRIP1-204ENST00000579028 ARHGEF6Q15052 776 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 NBPF12Q5TAG4 269 aaPredicted RBP11.2□□□□□ -0.62
BRIP1-204ENST00000579028 KSR2Q6VAB6 950 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 MS4A4AQ96JQ5 239 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 IFT57Q9NWB7 429 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 PCDHAC2Q9Y5I4 1007 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 PTCH2Q9Y6C5 1203 aa11.2□□□□□ -0.62
BRIP1-204ENST00000579028 CLRN2A0PK11 232 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 MYO1BO43795 1136 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 FKBP1AP62942 108 aaKnown RBP11.19□□□□□ -0.62
BRIP1-204ENST00000579028 GNAI1P63096 354 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 CFAP100Q494V2 611 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 CCDC30Q5VVM6 783 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 C15orf52Q6ZUT6 534 aaKnown RBP11.19□□□□□ -0.62
BRIP1-204ENST00000579028 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 PRMT6Q96LA8 375 aaPredicted RBP11.19□□□□□ -0.62
BRIP1-204ENST00000579028 PLA2G12BQ9BX93 195 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
BRIP1-204ENST00000579028 MYBBP1AQ9BQG0 1328 aaKnown RBP11.18□□□□□ -0.62
BRIP1-204ENST00000579028 PI4KAP2A4QPH2 592 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 NEURL1BA8MQ27 555 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 H0YGN5 161 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 H7C1W4 665 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 ITGA6P23229 1130 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 CHRNDQ07001 517 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 NEXNQ0ZGT2 675 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 RASA3Q14644 834 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 WDR43Q15061 677 aaKnown RBP eCLIP11.18□□□□□ -0.62
BRIP1-204ENST00000579028 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
BRIP1-204ENST00000579028 SLC4A8Q2Y0W8 1093 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 PI4KAP1Q8N8J0 262 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 C8orf58Q8NAV2 365 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 OPTNQ96CV9 577 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 MPHOSPH8Q99549 860 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 A0A1B0GUL6 1792 aa11.18□□□□□ -0.62
BRIP1-204ENST00000579028 AOX1Q06278 1338 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 CSF1RP07333 972 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 IL1R1P14778 569 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 KCNJ4P48050 445 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 CALD1Q05682 793 aaKnown RBP11.17□□□□□ -0.62
BRIP1-204ENST00000579028 TAF1CQ15572 869 aaPredicted RBP11.17□□□□□ -0.62
BRIP1-204ENST00000579028 UBE3BQ7Z3V4 1068 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 BRI3BPQ8WY22 251 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 ZFYVE28Q9HCC9 887 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
BRIP1-204ENST00000579028 F8W031 263 aaPredicted RBP11.16□□□□□ -0.62
BRIP1-204ENST00000579028 CASP7P55210 303 aa11.16□□□□□ -0.62
BRIP1-204ENST00000579028 TNFAIP1Q13829 316 aa11.16□□□□□ -0.62
BRIP1-204ENST00000579028 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.16□□□□□ -0.62
BRIP1-204ENST00000579028 ZSWIM8A7E2V4 1837 aa11.15□□□□□ -0.62
BRIP1-204ENST00000579028 CCL15-CCL14A0A0B4J2E2 113 aa11.15□□□□□ -0.62
BRIP1-204ENST00000579028 SNAP23O00161 211 aa11.15□□□□□ -0.62
BRIP1-204ENST00000579028 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
BRIP1-204ENST00000579028 GTF2A2P52657 109 aa11.15□□□□□ -0.62
BRIP1-204ENST00000579028 CCL15Q16663 113 aa11.15□□□□□ -0.62
BRIP1-204ENST00000579028 ZNF804AQ7Z570 1209 aa11.15□□□□□ -0.62
BRIP1-204ENST00000579028 FAM43AQ8N2R8 423 aa11.15□□□□□ -0.62
BRIP1-204ENST00000579028 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.63
BRIP1-204ENST00000579028 TLR2O60603 784 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 TAF5LO75529 589 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 GNRH1P01148 92 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 RBM5P52756 815 aaKnown RBP eCLIP11.14□□□□□ -0.63
BRIP1-204ENST00000579028 PRMT2P55345 433 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms