RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 A0A1B0GUL6 1792 aa11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 IL1R1P14778 569 aa11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 MMP14P50281 582 aa11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 MKRN3Q13064 507 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 SSH1Q8WYL5 1049 aa11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 RNF186Q9NXI6 227 aa11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 CLRN2A0PK11 232 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 MYO1BO43795 1136 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 GYG1P46976 350 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 SLFN5Q08AF3 891 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 DGKZQ13574 1117 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 CFAP100Q494V2 611 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 CDCA7LQ96GN5 454 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 KAZALD1Q96I82 304 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 CSRNP1Q96S65 589 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 SMC4Q9NTJ3 1288 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 SAGE1Q9NXZ1 904 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 PCDHAC2Q9Y5I4 1007 aa11.59□□□□□ -0.55
CDK5RAP3-211ENST00000578996 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 HIBADHP31937 336 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 UBE4AQ14139 1066 aa11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 METTL24Q5JXM2 366 aa11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 VPS37DQ86XT2 251 aa11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 ANGEL1Q9UNK9 670 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 FZD1Q9UP38 647 aa11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 UTYO14607 1347 aa11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
CDK5RAP3-211ENST00000578996 CHAF1AQ13111 956 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-211ENST00000578996 LRRC24Q50LG9 513 aa11.57□□□□□ -0.56
CDK5RAP3-211ENST00000578996 MFSD14BQ5SR56 506 aa11.57□□□□□ -0.56
CDK5RAP3-211ENST00000578996 KLHDC4Q8TBB5 520 aa11.57□□□□□ -0.56
CDK5RAP3-211ENST00000578996 ZBED3Q96IU2 234 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-211ENST00000578996 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
CDK5RAP3-211ENST00000578996 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-211ENST00000578996 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 FKBP1AP62942 108 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 PTPN12Q05209 780 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 RABL6Q3YEC7 729 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 CAVIN4Q5BKX8 364 aa11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 ANKRD44Q8N8A2 993 aa11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 MTMR14Q8NCE2 650 aa11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 PRMT6Q96LA8 375 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 COL1A1P02452 1464 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-211ENST00000578996 ALDH1L2Q3SY69 923 aa11.55□□□□□ -0.56
CDK5RAP3-211ENST00000578996 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-211ENST00000578996 USP44Q9H0E7 712 aa11.55□□□□□ -0.56
CDK5RAP3-211ENST00000578996 CASP8AP2Q9UKL3 1982 aa11.55□□□□□ -0.56
CDK5RAP3-211ENST00000578996 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
CDK5RAP3-211ENST00000578996 PPP1R12BO60237 982 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-211ENST00000578996 TBC1D8O95759 1140 aa11.54□□□□□ -0.56
CDK5RAP3-211ENST00000578996 SREBF2Q12772 1141 aa11.54□□□□□ -0.56
CDK5RAP3-211ENST00000578996 TDRD3Q9H7E2 651 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-211ENST00000578996 PPP2R3BQ9Y5P8 575 aa11.54□□□□□ -0.56
CDK5RAP3-211ENST00000578996 AOX1Q06278 1338 aa11.54□□□□□ -0.56
CDK5RAP3-211ENST00000578996 PDE8BO95263 885 aa11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 UBTFL1P0CB47 393 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 CRKP46108 304 aa11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 RASA3Q14644 834 aa11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 NBPF12Q5TAG4 269 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 SLC10A4Q96EP9 437 aa11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 SERPINA10Q9UK55 444 aa11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 NOB1Q9ULX3 412 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
CDK5RAP3-211ENST00000578996 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.56
CDK5RAP3-211ENST00000578996 TCP10L2B9ZVM9 353 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 BCAMP50895 628 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TNFAIP1Q13829 316 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 PUM3Q15397 648 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 LDLRAD1Q5T700 205 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 SPRYD7Q5W111 196 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 FBXO33Q7Z6M2 555 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 SIL1Q9H173 461 aa11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ZNF70Q9UC06 446 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ECM29Q5VYK3 1845 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 SLC5A1P13866 664 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 IREB2P48200 963 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TM4SF4P48230 202 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 GRIK5Q16478 980 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 DZIP1LQ8IYY4 767 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ZNF296Q8WUU4 475 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 API5Q9BZZ5 524 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ARAP2Q8WZ64 1704 aa11.51□□□□□ -0.57
CDK5RAP3-211ENST00000578996 EYA2O00167 538 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms