RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 GNL3LQ9NVN8 582 aaKnown RBP18.96■□□□□ 0.63
IFT20-208ENST00000578985 H7C1D1 291 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 PHKA1P46020 1223 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 GORABQ5T7V8 394 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 MICALL2Q8IY33 904 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 JAG2Q9Y219 1238 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 MYO3BQ8WXR4 1341 aa18.95■□□□□ 0.62
IFT20-208ENST00000578985 SHTN1A0MZ66 631 aa18.94■□□□□ 0.62
IFT20-208ENST00000578985 CHAF1AQ13111 956 aaPredicted RBP18.94■□□□□ 0.62
IFT20-208ENST00000578985 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
IFT20-208ENST00000578985 DCTPP1Q9H773 170 aa18.94■□□□□ 0.62
IFT20-208ENST00000578985 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
IFT20-208ENST00000578985 FKBP1AP62942 108 aaKnown RBP18.93■□□□□ 0.62
IFT20-208ENST00000578985 EAF2Q96CJ1 260 aaPredicted RBP18.93■□□□□ 0.62
IFT20-208ENST00000578985 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
IFT20-208ENST00000578985 ADARB2Q9NS39 739 aaKnown RBP18.93■□□□□ 0.62
IFT20-208ENST00000578985 USP17L8P0C7I0 530 aa18.92■□□□□ 0.62
IFT20-208ENST00000578985 EAPPQ56P03 285 aaPredicted RBP18.92■□□□□ 0.62
IFT20-208ENST00000578985 AACSQ86V21 672 aa18.92■□□□□ 0.62
IFT20-208ENST00000578985 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
IFT20-208ENST00000578985 CERS5Q8N5B7 392 aa18.92■□□□□ 0.62
IFT20-208ENST00000578985 DBNDD2Q9BQY9 259 aa18.92■□□□□ 0.62
IFT20-208ENST00000578985 CCDC8Q9H0W5 538 aaPredicted RBP18.92■□□□□ 0.62
IFT20-208ENST00000578985 SEMA3EO15041 775 aa18.91■□□□□ 0.62
IFT20-208ENST00000578985 TOMM70O94826 608 aa18.91■□□□□ 0.62
IFT20-208ENST00000578985 ZNF280AP59817 542 aaPredicted RBP18.91■□□□□ 0.62
IFT20-208ENST00000578985 HDAC1Q13547 482 aaPredicted RBP18.91■□□□□ 0.62
IFT20-208ENST00000578985 MFSD14BQ5SR56 506 aa18.91■□□□□ 0.62
IFT20-208ENST00000578985 USP50Q70EL3 339 aaPredicted RBP18.91■□□□□ 0.62
IFT20-208ENST00000578985 KIAA0825Q8IV33 1275 aa18.91■□□□□ 0.62
IFT20-208ENST00000578985 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
IFT20-208ENST00000578985 LRRCC1Q9C099 1032 aa18.91■□□□□ 0.62
IFT20-208ENST00000578985 DENND2AQ9ULE3 1009 aa18.91■□□□□ 0.62
IFT20-208ENST00000578985 ZBTB22O15209 634 aa18.9■□□□□ 0.62
IFT20-208ENST00000578985 SAMD7Q7Z3H4 446 aa18.9■□□□□ 0.62
IFT20-208ENST00000578985 OGFOD1Q8N543 542 aa18.9■□□□□ 0.62
IFT20-208ENST00000578985 RBM46Q8TBY0 533 aaKnown RBP18.9■□□□□ 0.62
IFT20-208ENST00000578985 TBC1D22AQ8WUA7 517 aa18.9■□□□□ 0.62
IFT20-208ENST00000578985 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
IFT20-208ENST00000578985 DBNLQ9UJU6 430 aaKnown RBP18.9■□□□□ 0.62
IFT20-208ENST00000578985 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
IFT20-208ENST00000578985 UQCRFS1P1P0C7P4 283 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 POTEIP0CG38 1075 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 POTEJP0CG39 1038 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 TBC1D10BQ4KMP7 808 aaPredicted RBP18.89■□□□□ 0.61
IFT20-208ENST00000578985 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 RBM26Q5T8P6 1007 aaKnown RBP18.89■□□□□ 0.61
IFT20-208ENST00000578985 LDHDQ86WU2 507 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 WDR66Q8TBY9 1149 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 TRPM4Q8TD43 1214 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 TLR7Q9NYK1 1049 aaKnown RBP18.89■□□□□ 0.61
IFT20-208ENST00000578985 HDAC9Q9UKV0 1011 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
IFT20-208ENST00000578985 ADAMTSL1Q8N6G6 1762 aa18.88■□□□□ 0.61
IFT20-208ENST00000578985 F8W031 263 aaPredicted RBP18.88■□□□□ 0.61
IFT20-208ENST00000578985 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
IFT20-208ENST00000578985 IFIT2P09913 472 aaKnown RBP18.88■□□□□ 0.61
IFT20-208ENST00000578985 ARID4AP29374 1257 aaPredicted RBP18.88■□□□□ 0.61
IFT20-208ENST00000578985 MMP14P50281 582 aa18.88■□□□□ 0.61
IFT20-208ENST00000578985 RASGRF1Q13972 1273 aa18.88■□□□□ 0.61
IFT20-208ENST00000578985 RWDD1Q9H446 243 aaPredicted RBP18.88■□□□□ 0.61
IFT20-208ENST00000578985 HIRAP54198 1017 aaPredicted RBP18.87■□□□□ 0.61
IFT20-208ENST00000578985 KIF4BQ2VIQ3 1234 aa18.87■□□□□ 0.61
IFT20-208ENST00000578985 SMC1BQ8NDV3 1235 aa18.87■□□□□ 0.61
IFT20-208ENST00000578985 MYOZ2Q9NPC6 264 aa18.87■□□□□ 0.61
IFT20-208ENST00000578985 AKAP11Q9UKA4 1901 aa18.87■□□□□ 0.61
IFT20-208ENST00000578985 POLR2AP24928 1970 aaKnown RBP18.86■□□□□ 0.61
IFT20-208ENST00000578985 PDS5AQ29RF7 1337 aaKnown RBP18.86■□□□□ 0.61
IFT20-208ENST00000578985 EGFRP00533 1210 aa18.86■□□□□ 0.61
IFT20-208ENST00000578985 GRIK5Q16478 980 aa18.86■□□□□ 0.61
IFT20-208ENST00000578985 CHADLQ6NUI6 762 aa18.86■□□□□ 0.61
IFT20-208ENST00000578985 HMG20BQ9P0W2 317 aa18.86■□□□□ 0.61
IFT20-208ENST00000578985 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
IFT20-208ENST00000578985 SUGT1Q9Y2Z0 365 aa18.86■□□□□ 0.61
IFT20-208ENST00000578985 SCARF1Q14162 830 aa18.85■□□□□ 0.61
IFT20-208ENST00000578985 SPATA5Q8NB90 893 aa18.85■□□□□ 0.61
IFT20-208ENST00000578985 GCC1Q96CN9 775 aa18.85■□□□□ 0.61
IFT20-208ENST00000578985 ZNF512BQ96KM6 892 aaPredicted RBP18.85■□□□□ 0.61
IFT20-208ENST00000578985 SALL1Q9NSC2 1324 aa18.84■□□□□ 0.61
IFT20-208ENST00000578985 MCAMP43121 646 aa18.84■□□□□ 0.61
IFT20-208ENST00000578985 FSTL1Q12841 308 aa18.84■□□□□ 0.61
IFT20-208ENST00000578985 ZGPATQ8N5A5 531 aaKnown RBP18.84■□□□□ 0.61
IFT20-208ENST00000578985 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
IFT20-208ENST00000578985 IGHDP01880 384 aa18.83■□□□□ 0.6
IFT20-208ENST00000578985 DLGAP5Q15398 846 aa18.83■□□□□ 0.6
IFT20-208ENST00000578985 PI16Q6UXB8 463 aa18.83■□□□□ 0.6
IFT20-208ENST00000578985 SNRKQ9NRH2 765 aa18.83■□□□□ 0.6
IFT20-208ENST00000578985 MAST3O60307 1309 aa18.82■□□□□ 0.6
IFT20-208ENST00000578985 LDHBP07195 334 aaKnown RBP18.82■□□□□ 0.6
IFT20-208ENST00000578985 CFAP100Q494V2 611 aa18.82■□□□□ 0.6
IFT20-208ENST00000578985 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
IFT20-208ENST00000578985 MAP1SQ66K74 1059 aaPredicted RBP18.82■□□□□ 0.6
IFT20-208ENST00000578985 MTMR14Q8NCE2 650 aa18.82■□□□□ 0.6
IFT20-208ENST00000578985 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
IFT20-208ENST00000578985 ABCF2Q9UG63 623 aa18.82■□□□□ 0.6
IFT20-208ENST00000578985 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
IFT20-208ENST00000578985 RBM5P52756 815 aaKnown RBP eCLIP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms