RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	GNL3L	Q9NVN8	582 aa	Known RBP	29.24	■■■□□ 2.27
ERBB2-209	ENST00000578709	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	29.24	■■■□□ 2.27
ERBB2-209	ENST00000578709	SHTN1	A0MZ66	631 aa		29.23	■■■□□ 2.27
ERBB2-209	ENST00000578709		H7C1D1	291 aa		29.23	■■■□□ 2.27
ERBB2-209	ENST00000578709	CCDC102B	Q68D86	513 aa		29.23	■■■□□ 2.27
ERBB2-209	ENST00000578709	CERS5	Q8N5B7	392 aa		29.23	■■■□□ 2.27
ERBB2-209	ENST00000578709	RHPN1	Q8TCX5	695 aa		29.23	■■■□□ 2.27
ERBB2-209	ENST00000578709	KIF1BP	Q96EK5	621 aa		29.23	■■■□□ 2.27
ERBB2-209	ENST00000578709	ZNF280A	P59817	542 aa	Predicted RBP	29.22	■■■□□ 2.27
ERBB2-209	ENST00000578709	USP50	Q70EL3	339 aa	Predicted RBP	29.22	■■■□□ 2.27
ERBB2-209	ENST00000578709	RBM46	Q8TBY0	533 aa	Known RBP	29.22	■■■□□ 2.27
ERBB2-209	ENST00000578709	DCTPP1	Q9H773	170 aa		29.22	■■■□□ 2.27
ERBB2-209	ENST00000578709	MYH13	Q9UKX3	1938 aa		29.22	■■■□□ 2.27
ERBB2-209	ENST00000578709	ADAMTSL1	Q8N6G6	1762 aa		29.21	■■■□□ 2.27
ERBB2-209	ENST00000578709	SEMA3E	O15041	775 aa		29.21	■■■□□ 2.27
ERBB2-209	ENST00000578709	FRAT2	O75474	233 aa	Predicted RBP	29.21	■■■□□ 2.27
ERBB2-209	ENST00000578709	USP17L8	P0C7I0	530 aa		29.21	■■■□□ 2.27
ERBB2-209	ENST00000578709	JAG2	Q9Y219	1238 aa		29.21	■■■□□ 2.27
ERBB2-209	ENST00000578709	MMP14	P50281	582 aa		29.2	■■■□□ 2.26
ERBB2-209	ENST00000578709	EAF2	Q96CJ1	260 aa	Predicted RBP	29.2	■■■□□ 2.26
ERBB2-209	ENST00000578709	COL1A1	P02452	1464 aa	Predicted RBP	29.19	■■■□□ 2.26
ERBB2-209	ENST00000578709	POTEI	P0CG38	1075 aa		29.19	■■■□□ 2.26
ERBB2-209	ENST00000578709	POTEJ	P0CG39	1038 aa		29.19	■■■□□ 2.26
ERBB2-209	ENST00000578709	MFSD14B	Q5SR56	506 aa		29.19	■■■□□ 2.26
ERBB2-209	ENST00000578709	LDHD	Q86WU2	507 aa		29.19	■■■□□ 2.26
ERBB2-209	ENST00000578709	CHAF1A	Q13111	956 aa	Predicted RBP	29.18	■■■□□ 2.26
ERBB2-209	ENST00000578709	EAPP	Q56P03	285 aa	Predicted RBP	29.18	■■■□□ 2.26
ERBB2-209	ENST00000578709	GORAB	Q5T7V8	394 aa		29.18	■■■□□ 2.26
ERBB2-209	ENST00000578709	TBC1D22A	Q8WUA7	517 aa		29.18	■■■□□ 2.26
ERBB2-209	ENST00000578709	DBNDD2	Q9BQY9	259 aa		29.18	■■■□□ 2.26
ERBB2-209	ENST00000578709	APBB1	O00213	710 aa		29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	HDAC1	Q13547	482 aa	Predicted RBP	29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	SAMD7	Q7Z3H4	446 aa		29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	TRPM4	Q8TD43	1214 aa		29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	IL1RAPL2	Q9NP60	686 aa		29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	DBNL	Q9UJU6	430 aa	Known RBP	29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	DENND2A	Q9ULE3	1009 aa		29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	PDS5A	Q29RF7	1337 aa	Known RBP	29.17	■■■□□ 2.26
ERBB2-209	ENST00000578709	ARID4A	P29374	1257 aa	Predicted RBP	29.16	■■■□□ 2.26
ERBB2-209	ENST00000578709	HIRA	P54198	1017 aa	Predicted RBP	29.16	■■■□□ 2.26
ERBB2-209	ENST00000578709	IRX6	P78412	446 aa	Predicted RBP	29.16	■■■□□ 2.26
ERBB2-209	ENST00000578709	KIAA0825	Q8IV33	1275 aa		29.16	■■■□□ 2.26
ERBB2-209	ENST00000578709	OGFOD1	Q8N543	542 aa		29.16	■■■□□ 2.26
ERBB2-209	ENST00000578709	WDR66	Q8TBY9	1149 aa		29.16	■■■□□ 2.26
ERBB2-209	ENST00000578709	EGFR	P00533	1210 aa		29.15	■■■□□ 2.26
ERBB2-209	ENST00000578709	RASGRF1	Q13972	1273 aa		29.15	■■■□□ 2.26
ERBB2-209	ENST00000578709	AACS	Q86V21	672 aa		29.15	■■■□□ 2.26
ERBB2-209	ENST00000578709	CLASRP	Q8N2M8	674 aa	Known RBP	29.15	■■■□□ 2.26
ERBB2-209	ENST00000578709	SMC1B	Q8NDV3	1235 aa		29.15	■■■□□ 2.26
ERBB2-209	ENST00000578709	CCDC8	Q9H0W5	538 aa	Predicted RBP	29.15	■■■□□ 2.26
ERBB2-209	ENST00000578709	TLR7	Q9NYK1	1049 aa	Known RBP	29.15	■■■□□ 2.26
ERBB2-209	ENST00000578709	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	29.14	■■■□□ 2.26
ERBB2-209	ENST00000578709	CHADL	Q6NUI6	762 aa		29.14	■■■□□ 2.26
ERBB2-209	ENST00000578709	LRRCC1	Q9C099	1032 aa		29.14	■■■□□ 2.26
ERBB2-209	ENST00000578709	MYOZ2	Q9NPC6	264 aa		29.14	■■■□□ 2.26
ERBB2-209	ENST00000578709	UQCRFS1P1	P0C7P4	283 aa		29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	FSTL1	Q12841	308 aa		29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	KIF4B	Q2VIQ3	1234 aa		29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	ZC3H15	Q8WU90	426 aa	Known RBP	29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	ZNF512B	Q96KM6	892 aa	Predicted RBP	29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	PGAP2	Q9UHJ9	254 aa		29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	HDAC9	Q9UKV0	1011 aa		29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	SUGT1	Q9Y2Z0	365 aa		29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	SALL1	Q9NSC2	1324 aa		29.13	■■■□□ 2.25
ERBB2-209	ENST00000578709	CCDC158	Q5M9N0	1113 aa		29.12	■■■□□ 2.25
ERBB2-209	ENST00000578709	CLEC11A	Q9Y240	323 aa		29.11	■■■□□ 2.25
ERBB2-209	ENST00000578709	C1QTNF8	P60827	252 aa		29.1	■■■□□ 2.25
ERBB2-209	ENST00000578709	GRIK5	Q16478	980 aa		29.1	■■■□□ 2.25
ERBB2-209	ENST00000578709	TTC39A	Q5SRH9	613 aa		29.1	■■■□□ 2.25
ERBB2-209	ENST00000578709	RBM26	Q5T8P6	1007 aa	Known RBP	29.1	■■■□□ 2.25
ERBB2-209	ENST00000578709	HMG20B	Q9P0W2	317 aa		29.1	■■■□□ 2.25
ERBB2-209	ENST00000578709		F8W031	263 aa	Predicted RBP	29.09	■■■□□ 2.25
ERBB2-209	ENST00000578709	MCAM	P43121	646 aa		29.09	■■■□□ 2.25
ERBB2-209	ENST00000578709	SPATA5	Q8NB90	893 aa		29.09	■■■□□ 2.25
ERBB2-209	ENST00000578709	MTMR14	Q8NCE2	650 aa		29.09	■■■□□ 2.25
ERBB2-209	ENST00000578709	ZBED3	Q96IU2	234 aa	Predicted RBP	29.09	■■■□□ 2.25
ERBB2-209	ENST00000578709	TTF2	Q9UNY4	1162 aa	Known RBP	29.09	■■■□□ 2.25
ERBB2-209	ENST00000578709	AKAP11	Q9UKA4	1901 aa		29.09	■■■□□ 2.25
ERBB2-209	ENST00000578709	IFIT2	P09913	472 aa	Known RBP	29.08	■■■□□ 2.25
ERBB2-209	ENST00000578709	SCARF1	Q14162	830 aa		29.08	■■■□□ 2.25
ERBB2-209	ENST00000578709	RWDD1	Q9H446	243 aa	Predicted RBP	29.08	■■■□□ 2.25
ERBB2-209	ENST00000578709	SMARCA5	O60264	1052 aa	Predicted RBP	29.07	■■■□□ 2.24
ERBB2-209	ENST00000578709	CENPB	P07199	599 aa	Predicted RBP	29.07	■■■□□ 2.24
ERBB2-209	ENST00000578709	GCC1	Q96CN9	775 aa		29.07	■■■□□ 2.24
ERBB2-209	ENST00000578709	SERPINA10	Q9UK55	444 aa		29.07	■■■□□ 2.24
ERBB2-209	ENST00000578709	HDLBP	Q00341	1268 aa	Known RBP	29.06	■■■□□ 2.24
ERBB2-209	ENST00000578709	MAP1S	Q66K74	1059 aa	Predicted RBP	29.06	■■■□□ 2.24
ERBB2-209	ENST00000578709	PI16	Q6UXB8	463 aa		29.06	■■■□□ 2.24
ERBB2-209	ENST00000578709	ZGPAT	Q8N5A5	531 aa	Known RBP	29.06	■■■□□ 2.24
ERBB2-209	ENST00000578709	MRI	Q9BWK5	157 aa		29.06	■■■□□ 2.24
ERBB2-209	ENST00000578709	MAST3	O60307	1309 aa		29.05	■■■□□ 2.24
ERBB2-209	ENST00000578709	WNT10B	O00744	389 aa		29.05	■■■□□ 2.24
ERBB2-209	ENST00000578709	DLGAP5	Q15398	846 aa		29.04	■■■□□ 2.24
ERBB2-209	ENST00000578709	CFAP100	Q494V2	611 aa		29.04	■■■□□ 2.24
ERBB2-209	ENST00000578709	CNTROB	Q8N137	903 aa		29.04	■■■□□ 2.24
ERBB2-209	ENST00000578709	POLR2A	P24928	1970 aa	Known RBP	29.03	■■■□□ 2.24
ERBB2-209	ENST00000578709	ITGBL1	O95965	494 aa	Predicted RBP	29.03	■■■□□ 2.24
ERBB2-209	ENST00000578709	LDHB	P07195	334 aa	Known RBP	29.03	■■■□□ 2.24
ERBB2-209	ENST00000578709	PRDX5	P30044	214 aa		29.03	■■■□□ 2.24
ERBB2-209	ENST00000578709	NBPF9	Q3BBW0	867 aa		29.03	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms