RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 IFIT5Q13325 482 aaKnown RBP26.74■■□□□ 1.87
TSEN54-205ENST00000578415 F6X3S4 739 aa26.73■■□□□ 1.87
TSEN54-205ENST00000578415 IL1R1P14778 569 aa26.73■■□□□ 1.87
TSEN54-205ENST00000578415 MAP3K11Q16584 847 aa26.73■■□□□ 1.87
TSEN54-205ENST00000578415 BEND3Q5T5X7 828 aa26.73■■□□□ 1.87
TSEN54-205ENST00000578415 FKTNO75072 461 aa26.72■■□□□ 1.87
TSEN54-205ENST00000578415 FBXO46Q6PJ61 603 aaPredicted RBP26.72■■□□□ 1.87
TSEN54-205ENST00000578415 CHMP3Q9Y3E7 222 aa26.72■■□□□ 1.87
TSEN54-205ENST00000578415 AOX1Q06278 1338 aa26.71■■□□□ 1.87
TSEN54-205ENST00000578415 F8W031 263 aaPredicted RBP26.71■■□□□ 1.87
TSEN54-205ENST00000578415 EXOSC9Q06265 439 aaKnown RBP26.71■■□□□ 1.87
TSEN54-205ENST00000578415 CFAP100Q494V2 611 aa26.71■■□□□ 1.87
TSEN54-205ENST00000578415 EPHA10Q5JZY3 1008 aa26.71■■□□□ 1.87
TSEN54-205ENST00000578415 ZNF804AQ7Z570 1209 aa26.71■■□□□ 1.87
TSEN54-205ENST00000578415 CLMNQ96JQ2 1002 aa26.71■■□□□ 1.87
TSEN54-205ENST00000578415 PPP2R3BQ9Y5P8 575 aa26.71■■□□□ 1.87
TSEN54-205ENST00000578415 CLRN2A0PK11 232 aa26.7■■□□□ 1.86
TSEN54-205ENST00000578415 SPDYE2BA6NHP3 402 aa26.7■■□□□ 1.86
TSEN54-205ENST00000578415 SPDYE6P0CI01 402 aa26.7■■□□□ 1.86
TSEN54-205ENST00000578415 FKBP1AP62942 108 aaKnown RBP26.7■■□□□ 1.86
TSEN54-205ENST00000578415 SLC10A4Q96EP9 437 aa26.7■■□□□ 1.86
TSEN54-205ENST00000578415 PRMT6Q96LA8 375 aaPredicted RBP26.7■■□□□ 1.86
TSEN54-205ENST00000578415 JAG2Q9Y219 1238 aa26.7■■□□□ 1.86
TSEN54-205ENST00000578415 A0A1B0GUL6 1792 aa26.69■■□□□ 1.86
TSEN54-205ENST00000578415 MANSC4A6NHS7 340 aaPredicted RBP26.69■■□□□ 1.86
TSEN54-205ENST00000578415 ALDH1A1P00352 501 aa26.69■■□□□ 1.86
TSEN54-205ENST00000578415 LMBR1LQ6UX01 489 aa26.69■■□□□ 1.86
TSEN54-205ENST00000578415 WDR63Q8IWG1 891 aa26.69■■□□□ 1.86
TSEN54-205ENST00000578415 ZNF594Q96JF6 807 aaPredicted RBP26.69■■□□□ 1.86
TSEN54-205ENST00000578415 PRPF38BQ5VTL8 546 aaKnown RBP26.68■■□□□ 1.86
TSEN54-205ENST00000578415 IFNL1Q8IU54 200 aa26.68■■□□□ 1.86
TSEN54-205ENST00000578415 WNK4Q96J92 1243 aa26.68■■□□□ 1.86
TSEN54-205ENST00000578415 SALL2Q9Y467 1007 aaPredicted RBP26.68■■□□□ 1.86
TSEN54-205ENST00000578415 PPP1R12BO60237 982 aaPredicted RBP26.67■■□□□ 1.86
TSEN54-205ENST00000578415 ZBTB48P10074 688 aaPredicted RBP26.67■■□□□ 1.86
TSEN54-205ENST00000578415 INHBEP58166 350 aa26.67■■□□□ 1.86
TSEN54-205ENST00000578415 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.67■■□□□ 1.86
TSEN54-205ENST00000578415 GRM8O00222 908 aa26.66■■□□□ 1.86
TSEN54-205ENST00000578415 IGF2BP3O00425 579 aaKnown RBP eCLIP26.66■■□□□ 1.86
TSEN54-205ENST00000578415 MYO1BO43795 1136 aa26.66■■□□□ 1.86
TSEN54-205ENST00000578415 NBPF12Q5TAG4 269 aaPredicted RBP26.66■■□□□ 1.86
TSEN54-205ENST00000578415 VEZTQ9HBM0 779 aa26.66■■□□□ 1.86
TSEN54-205ENST00000578415 SPINK5Q9NQ38 1064 aaPredicted RBP26.66■■□□□ 1.86
TSEN54-205ENST00000578415 PLIN1O60240 522 aa26.65■■□□□ 1.86
TSEN54-205ENST00000578415 CCDC57Q2TAC2 916 aa26.65■■□□□ 1.86
TSEN54-205ENST00000578415 SUPT20HL1Q3ZLR7 823 aa26.65■■□□□ 1.86
TSEN54-205ENST00000578415 LDHAL6AQ6ZMR3 332 aa26.65■■□□□ 1.86
TSEN54-205ENST00000578415 MRS2Q9HD23 443 aa26.65■■□□□ 1.86
TSEN54-205ENST00000578415 CACNA1FO60840 1977 aa26.65■■□□□ 1.86
TSEN54-205ENST00000578415 UNCXA6NJT0 531 aa26.64■■□□□ 1.86
TSEN54-205ENST00000578415 CNNM1Q9NRU3 951 aa26.64■■□□□ 1.86
TSEN54-205ENST00000578415 FAM205AQ6ZU69 1335 aa26.64■■□□□ 1.85
TSEN54-205ENST00000578415 GJA5P36382 358 aa26.63■■□□□ 1.85
TSEN54-205ENST00000578415 RASA3Q14644 834 aa26.63■■□□□ 1.85
TSEN54-205ENST00000578415 ECM29Q5VYK3 1845 aa26.62■■□□□ 1.85
TSEN54-205ENST00000578415 USP2O75604 605 aaPredicted RBP26.62■■□□□ 1.85
TSEN54-205ENST00000578415 RBM5P52756 815 aaKnown RBP eCLIP26.62■■□□□ 1.85
TSEN54-205ENST00000578415 TAF7LQ5H9L4 462 aa26.62■■□□□ 1.85
TSEN54-205ENST00000578415 OTOP1Q7RTM1 612 aa26.61■■□□□ 1.85
TSEN54-205ENST00000578415 TDRD7Q8NHU6 1098 aaKnown RBP26.61■■□□□ 1.85
TSEN54-205ENST00000578415 PCDH10Q9P2E7 1040 aa26.61■■□□□ 1.85
TSEN54-205ENST00000578415 TRIM17Q9Y577 477 aa26.61■■□□□ 1.85
TSEN54-205ENST00000578415 IREB2P48200 963 aaKnown RBP26.6■■□□□ 1.85
TSEN54-205ENST00000578415 MFSD14BQ5SR56 506 aa26.6■■□□□ 1.85
TSEN54-205ENST00000578415 LAMB1P07942 1786 aa26.59■■□□□ 1.85
TSEN54-205ENST00000578415 GYG1P46976 350 aa26.59■■□□□ 1.85
TSEN54-205ENST00000578415 SPDYE2Q495Y8 402 aa26.59■■□□□ 1.85
TSEN54-205ENST00000578415 C9orf78Q9NZ63 289 aaPredicted RBP26.59■■□□□ 1.85
TSEN54-205ENST00000578415 HTTP42858 3142 aa26.59■■□□□ 1.85
TSEN54-205ENST00000578415 ALDH1L1O75891 902 aa26.58■■□□□ 1.85
TSEN54-205ENST00000578415 UBE4AQ14139 1066 aa26.58■■□□□ 1.85
TSEN54-205ENST00000578415 ANKRD13AQ8IZ07 590 aa26.58■■□□□ 1.85
TSEN54-205ENST00000578415 KAZALD1Q96I82 304 aa26.58■■□□□ 1.85
TSEN54-205ENST00000578415 FAM84BQ96KN1 310 aaPredicted RBP26.58■■□□□ 1.85
TSEN54-205ENST00000578415 PTPN18Q99952 460 aa26.58■■□□□ 1.85
TSEN54-205ENST00000578415 PUS3Q9BZE2 481 aaKnown RBP26.58■■□□□ 1.85
TSEN54-205ENST00000578415 ZNF70Q9UC06 446 aaPredicted RBP26.58■■□□□ 1.85
TSEN54-205ENST00000578415 SERPINA10Q9UK55 444 aa26.58■■□□□ 1.85
TSEN54-205ENST00000578415 TTF2Q9UNY4 1162 aaKnown RBP26.58■■□□□ 1.85
TSEN54-205ENST00000578415 CRHR2Q13324 411 aa26.57■■□□□ 1.84
TSEN54-205ENST00000578415 CDAN1Q8IWY9 1227 aa26.57■■□□□ 1.84
TSEN54-205ENST00000578415 SUCLG2Q96I99 432 aa26.57■■□□□ 1.84
TSEN54-205ENST00000578415 TESPA1A2RU30 521 aaPredicted RBP26.56■■□□□ 1.84
TSEN54-205ENST00000578415 HIBADHP31937 336 aaKnown RBP26.56■■□□□ 1.84
TSEN54-205ENST00000578415 TNFAIP1Q13829 316 aa26.56■■□□□ 1.84
TSEN54-205ENST00000578415 TEPSINQ96N21 525 aa26.56■■□□□ 1.84
TSEN54-205ENST00000578415 TDRD3Q9H7E2 651 aaKnown RBP26.56■■□□□ 1.84
TSEN54-205ENST00000578415 SLC4A10Q6U841 1118 aa26.55■■□□□ 1.84
TSEN54-205ENST00000578415 DZIP1LQ8IYY4 767 aaKnown RBP26.55■■□□□ 1.84
TSEN54-205ENST00000578415 CD99L2Q8TCZ2 262 aa26.55■■□□□ 1.84
TSEN54-205ENST00000578415 SRCIN1Q9C0H9 1055 aa26.55■■□□□ 1.84
TSEN54-205ENST00000578415 OPTNQ96CV9 577 aa26.54■■□□□ 1.84
TSEN54-205ENST00000578415 ERO1AQ96HE7 468 aa26.54■■□□□ 1.84
TSEN54-205ENST00000578415 ELP3Q9H9T3 547 aa26.54■■□□□ 1.84
TSEN54-205ENST00000578415 RIPOR2Q9Y4F9 1068 aa26.54■■□□□ 1.84
TSEN54-205ENST00000578415 CAP1Q01518 475 aa26.53■■□□□ 1.84
TSEN54-205ENST00000578415 GRIK5Q16478 980 aa26.53■■□□□ 1.84
TSEN54-205ENST00000578415 OTUD7BQ6GQQ9 843 aa26.53■■□□□ 1.84
TSEN54-205ENST00000578415 POTEFA5A3E0 1075 aa26.52■■□□□ 1.84
TSEN54-205ENST00000578415 NBPF7P0C2Y1 421 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms