RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 OTOP1Q7RTM1 612 aa17.39■□□□□ 0.37
UPF3AP2-202ENST00000578315 VEZTQ9HBM0 779 aa17.39■□□□□ 0.37
UPF3AP2-202ENST00000578315 AOX1Q06278 1338 aa17.39■□□□□ 0.37
UPF3AP2-202ENST00000578315 ANKRD18BA2A2Z9 1011 aa17.38■□□□□ 0.37
UPF3AP2-202ENST00000578315 POTEFA5A3E0 1075 aa17.38■□□□□ 0.37
UPF3AP2-202ENST00000578315 INHBEP58166 350 aa17.38■□□□□ 0.37
UPF3AP2-202ENST00000578315 NBPF12Q5TAG4 269 aaPredicted RBP17.38■□□□□ 0.37
UPF3AP2-202ENST00000578315 PRMT6Q96LA8 375 aaPredicted RBP17.38■□□□□ 0.37
UPF3AP2-202ENST00000578315 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
UPF3AP2-202ENST00000578315 COL1A1P02452 1464 aaPredicted RBP17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 ZBTB48P10074 688 aaPredicted RBP17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 RBM5P52756 815 aaKnown RBP eCLIP17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 FLIIQ13045 1269 aa17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 FKBP5Q13451 457 aaPredicted RBP17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
UPF3AP2-202ENST00000578315 SPDYE2BA6NHP3 402 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 MYO1BO43795 1136 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 PLIN1O60240 522 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 SPDYE6P0CI01 402 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 GJA5P36382 358 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 SUPT20HL1Q3ZLR7 823 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 MTMR14Q8NCE2 650 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 CD99L2Q8TCZ2 262 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 DNAAF4Q8WXU2 420 aa17.36■□□□□ 0.37
UPF3AP2-202ENST00000578315 HTTP42858 3142 aa17.35■□□□□ 0.37
UPF3AP2-202ENST00000578315 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
UPF3AP2-202ENST00000578315 CRHR2Q13324 411 aa17.35■□□□□ 0.37
UPF3AP2-202ENST00000578315 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
UPF3AP2-202ENST00000578315 PPP2R3BQ9Y5P8 575 aa17.35■□□□□ 0.37
UPF3AP2-202ENST00000578315 ECM29Q5VYK3 1845 aa17.35■□□□□ 0.37
UPF3AP2-202ENST00000578315 IL1R1P14778 569 aa17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 IREB2P48200 963 aaKnown RBP17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 FOXO4P98177 505 aa17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 RASA3Q14644 834 aa17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 LINS1Q8NG48 757 aa17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 ERO1AQ96HE7 468 aa17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
UPF3AP2-202ENST00000578315 CCDC184Q52MB2 194 aa17.33■□□□□ 0.36
UPF3AP2-202ENST00000578315 INTS3Q68E01 1043 aaKnown RBP17.33■□□□□ 0.36
UPF3AP2-202ENST00000578315 C15orf52Q6ZUT6 534 aaKnown RBP17.33■□□□□ 0.36
UPF3AP2-202ENST00000578315 GCC1Q96CN9 775 aa17.33■□□□□ 0.36
UPF3AP2-202ENST00000578315 PTPN18Q99952 460 aa17.33■□□□□ 0.36
UPF3AP2-202ENST00000578315 ELP3Q9H9T3 547 aa17.33■□□□□ 0.36
UPF3AP2-202ENST00000578315 A0A1B0GUL6 1792 aa17.33■□□□□ 0.36
UPF3AP2-202ENST00000578315 CENPFP49454 3210 aa17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 F6X3S4 739 aa17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 EN2P19622 333 aaPredicted RBP17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 CAP1Q01518 475 aa17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 OTUD7BQ6GQQ9 843 aa17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 ANKRD13AQ8IZ07 590 aa17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 EFCC1Q9HA90 598 aa17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 MKI67P46013 3256 aaKnown RBP17.32■□□□□ 0.36
UPF3AP2-202ENST00000578315 SP3Q02447 781 aa17.31■□□□□ 0.36
UPF3AP2-202ENST00000578315 HABP4Q5JVS0 413 aaKnown RBP17.31■□□□□ 0.36
UPF3AP2-202ENST00000578315 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
UPF3AP2-202ENST00000578315 UNCXA6NJT0 531 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 TAF7LQ5H9L4 462 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 EPHA10Q5JZY3 1008 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 TDRD3Q9H7E2 651 aaKnown RBP17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 CNNM1Q9NRU3 951 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 ZNF70Q9UC06 446 aaPredicted RBP17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 LAMB1P07942 1786 aa17.3■□□□□ 0.36
UPF3AP2-202ENST00000578315 TTF2Q9UNY4 1162 aaKnown RBP17.29■□□□□ 0.36
UPF3AP2-202ENST00000578315 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
UPF3AP2-202ENST00000578315 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
UPF3AP2-202ENST00000578315 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 TESPA1A2RU30 521 aaPredicted RBP17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 TCP10L2B9ZVM9 353 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 GYG1P46976 350 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 CCDC57Q2TAC2 916 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 MFSD14BQ5SR56 506 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 ARMC5Q96C12 935 aa17.28■□□□□ 0.36
UPF3AP2-202ENST00000578315 VAMP4O75379 141 aa17.27■□□□□ 0.36
UPF3AP2-202ENST00000578315 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.36
UPF3AP2-202ENST00000578315 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.36
UPF3AP2-202ENST00000578315 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
UPF3AP2-202ENST00000578315 MS4A4AQ96JQ5 239 aa17.27■□□□□ 0.36
UPF3AP2-202ENST00000578315 BRCA2P51587 3418 aa17.27■□□□□ 0.35
UPF3AP2-202ENST00000578315 IL16Q14005 1332 aa17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 FAM205AQ6ZU69 1335 aa17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 RBBP6Q7Z6E9 1792 aaKnown RBP17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 TNFAIP1Q13829 316 aa17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 TAF1CQ15572 869 aaPredicted RBP17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 DZIP1LQ8IYY4 767 aaKnown RBP17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 BRI3BPQ8WY22 251 aa17.26■□□□□ 0.35
UPF3AP2-202ENST00000578315 TEPSINQ96N21 525 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms