RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 MYOZ2Q9NPC6 264 aa28.65■■■□□ 2.18
LIMD2-204ENST00000578297 ZBTB40Q9NUA8 1239 aa28.65■■■□□ 2.18
LIMD2-204ENST00000578297 G3BP1Q13283 466 aaKnown RBP eCLIP28.64■■■□□ 2.18
LIMD2-204ENST00000578297 CEP85Q6P2H3 762 aa28.64■■■□□ 2.18
LIMD2-204ENST00000578297 CERS5Q8N5B7 392 aa28.64■■■□□ 2.18
LIMD2-204ENST00000578297 CEP350Q5VT06 3117 aa28.64■■■□□ 2.17
LIMD2-204ENST00000578297 TFCP2Q12800 502 aa28.63■■■□□ 2.17
LIMD2-204ENST00000578297 KIAA0825Q8IV33 1275 aa28.62■■■□□ 2.17
LIMD2-204ENST00000578297 AKAP2Q9Y2D5 859 aa28.62■■■□□ 2.17
LIMD2-204ENST00000578297 HDAC9Q9UKV0 1011 aa28.61■■■□□ 2.17
LIMD2-204ENST00000578297 JAG2Q9Y219 1238 aa28.61■■■□□ 2.17
LIMD2-204ENST00000578297 FRAT2O75474 233 aaPredicted RBP28.6■■■□□ 2.17
LIMD2-204ENST00000578297 IQSEC3Q9UPP2 1182 aaPredicted RBP28.6■■■□□ 2.17
LIMD2-204ENST00000578297 NOP58Q9Y2X3 529 aaKnown RBP28.6■■■□□ 2.17
LIMD2-204ENST00000578297 TIMM10P62072 90 aa28.59■■■□□ 2.17
LIMD2-204ENST00000578297 SCARF1Q14162 830 aa28.59■■■□□ 2.17
LIMD2-204ENST00000578297 MFSD14BQ5SR56 506 aa28.59■■■□□ 2.17
LIMD2-204ENST00000578297 CDC37L1Q7L3B6 337 aa28.59■■■□□ 2.17
LIMD2-204ENST00000578297 SURF6O75683 361 aaKnown RBP28.58■■■□□ 2.17
LIMD2-204ENST00000578297 RPAP2Q8IXW5 612 aaPredicted RBP28.58■■■□□ 2.17
LIMD2-204ENST00000578297 CREBZFQ9NS37 354 aa28.58■■■□□ 2.17
LIMD2-204ENST00000578297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.58■■■□□ 2.17
LIMD2-204ENST00000578297 A0A1B0GUL7 405 aa28.57■■■□□ 2.16
LIMD2-204ENST00000578297 HTRA3P83110 453 aa28.57■■■□□ 2.16
LIMD2-204ENST00000578297 TBC1D22AQ8WUA7 517 aa28.57■■■□□ 2.16
LIMD2-204ENST00000578297 DCPSQ96C86 337 aaKnown RBP28.57■■■□□ 2.16
LIMD2-204ENST00000578297 GLIS2Q9BZE0 524 aaPredicted RBP28.57■■■□□ 2.16
LIMD2-204ENST00000578297 ARAP2Q8WZ64 1704 aa28.57■■■□□ 2.16
LIMD2-204ENST00000578297 RRP1P56182 461 aaKnown RBP28.56■■■□□ 2.16
LIMD2-204ENST00000578297 GNL3LQ9NVN8 582 aaKnown RBP28.56■■■□□ 2.16
LIMD2-204ENST00000578297 ASTN2O75129 1339 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-204ENST00000578297 TMEM88BA6NKF7 163 aa28.55■■■□□ 2.16
LIMD2-204ENST00000578297 F8W031 263 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-204ENST00000578297 TRAF5O00463 557 aa28.55■■■□□ 2.16
LIMD2-204ENST00000578297 ZBTB22O15209 634 aa28.55■■■□□ 2.16
LIMD2-204ENST00000578297 ADORA1P30542 326 aa28.55■■■□□ 2.16
LIMD2-204ENST00000578297 CHAF1AQ13111 956 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-204ENST00000578297 OS9Q13438 667 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-204ENST00000578297 GGA3Q9NZ52 723 aa28.55■■■□□ 2.16
LIMD2-204ENST00000578297 POLR2AP24928 1970 aaKnown RBP28.54■■■□□ 2.16
LIMD2-204ENST00000578297 WNT10BO00744 389 aa28.54■■■□□ 2.16
LIMD2-204ENST00000578297 FMR1Q06787 632 aaKnown RBP eCLIP28.54■■■□□ 2.16
LIMD2-204ENST00000578297 NBPF9Q3BBW0 867 aa28.54■■■□□ 2.16
LIMD2-204ENST00000578297 USP48Q86UV5 1035 aa28.54■■■□□ 2.16
LIMD2-204ENST00000578297 DNAJC5GQ8N7S2 189 aa28.54■■■□□ 2.16
LIMD2-204ENST00000578297 MTMR14Q8NCE2 650 aa28.54■■■□□ 2.16
LIMD2-204ENST00000578297 XAGE2Q96GT9 111 aa28.54■■■□□ 2.16
LIMD2-204ENST00000578297 ZBED3Q96IU2 234 aaPredicted RBP28.54■■■□□ 2.16
LIMD2-204ENST00000578297 GPR108Q9NPR9 543 aa28.54■■■□□ 2.16
LIMD2-204ENST00000578297 PITPNM2Q9BZ72 1349 aa28.53■■■□□ 2.16
LIMD2-204ENST00000578297 PHKA1P46020 1223 aa28.53■■■□□ 2.16
LIMD2-204ENST00000578297 ANGEL2Q5VTE6 544 aaKnown RBP28.53■■■□□ 2.16
LIMD2-204ENST00000578297 CCDC102BQ68D86 513 aa28.53■■■□□ 2.16
LIMD2-204ENST00000578297 KRT26Q7Z3Y9 468 aa28.53■■■□□ 2.16
LIMD2-204ENST00000578297 SEMA3EO15041 775 aa28.52■■■□□ 2.16
LIMD2-204ENST00000578297 NEUROD6Q96NK8 337 aa28.52■■■□□ 2.16
LIMD2-204ENST00000578297 TRPM7Q96QT4 1865 aa28.52■■■□□ 2.16
LIMD2-204ENST00000578297 MYH13Q9UKX3 1938 aa28.51■■■□□ 2.16
LIMD2-204ENST00000578297 HMMRO75330 724 aa28.51■■■□□ 2.15
LIMD2-204ENST00000578297 DLGAP5Q15398 846 aa28.51■■■□□ 2.15
LIMD2-204ENST00000578297 SULF1Q8IWU6 871 aa28.51■■■□□ 2.15
LIMD2-204ENST00000578297 SIRT2Q8IXJ6 389 aa28.51■■■□□ 2.15
LIMD2-204ENST00000578297 WDR66Q8TBY9 1149 aa28.51■■■□□ 2.15
LIMD2-204ENST00000578297 TTF2Q9UNY4 1162 aaKnown RBP28.51■■■□□ 2.15
LIMD2-204ENST00000578297 CST9Q5W186 159 aa28.5■■■□□ 2.15
LIMD2-204ENST00000578297 DENND2AQ9ULE3 1009 aa28.5■■■□□ 2.15
LIMD2-204ENST00000578297 SUGT1Q9Y2Z0 365 aa28.5■■■□□ 2.15
LIMD2-204ENST00000578297 COL1A1P02452 1464 aaPredicted RBP28.49■■■□□ 2.15
LIMD2-204ENST00000578297 GRIK5Q16478 980 aa28.49■■■□□ 2.15
LIMD2-204ENST00000578297 CFAP100Q494V2 611 aa28.49■■■□□ 2.15
LIMD2-204ENST00000578297 SERPINA10Q9UK55 444 aa28.49■■■□□ 2.15
LIMD2-204ENST00000578297 ADM5C9JUS6 153 aa28.48■■■□□ 2.15
LIMD2-204ENST00000578297 HSP90AB4PQ58FF6 505 aa28.48■■■□□ 2.15
LIMD2-204ENST00000578297 TNNI3KQ59H18 835 aa28.48■■■□□ 2.15
LIMD2-204ENST00000578297 ERC1Q8IUD2 1116 aa28.48■■■□□ 2.15
LIMD2-204ENST00000578297 EXOC6BQ9Y2D4 811 aa28.48■■■□□ 2.15
LIMD2-204ENST00000578297 FPGT-TNNI3KV9GXZ4 949 aa28.48■■■□□ 2.15
LIMD2-204ENST00000578297 SPDYE2BA6NHP3 402 aa28.47■■■□□ 2.15
LIMD2-204ENST00000578297 SPDYE6P0CI01 402 aa28.47■■■□□ 2.15
LIMD2-204ENST00000578297 CELF2O95319 508 aaKnown RBP28.46■■■□□ 2.15
LIMD2-204ENST00000578297 HDLBPQ00341 1268 aaKnown RBP28.46■■■□□ 2.15
LIMD2-204ENST00000578297 GORABQ5T7V8 394 aa28.46■■■□□ 2.15
LIMD2-204ENST00000578297 DLK2Q6UY11 383 aa28.46■■■□□ 2.15
LIMD2-204ENST00000578297 KLRG1Q96E93 195 aa28.46■■■□□ 2.15
LIMD2-204ENST00000578297 MRIQ9BWK5 157 aa28.46■■■□□ 2.15
LIMD2-204ENST00000578297 PCDHAC2Q9Y5I4 1007 aa28.46■■■□□ 2.15
LIMD2-204ENST00000578297 PDS5AQ29RF7 1337 aaKnown RBP28.45■■■□□ 2.15
LIMD2-204ENST00000578297 SALL1Q9NSC2 1324 aa28.45■■■□□ 2.15
LIMD2-204ENST00000578297 RBM5P52756 815 aaKnown RBP eCLIP28.45■■■□□ 2.14
LIMD2-204ENST00000578297 RASGRF1Q13972 1273 aa28.45■■■□□ 2.14
LIMD2-204ENST00000578297 PRMT6Q96LA8 375 aaPredicted RBP28.45■■■□□ 2.14
LIMD2-204ENST00000578297 MAST3O60307 1309 aa28.43■■■□□ 2.14
LIMD2-204ENST00000578297 MYO1BO43795 1136 aa28.43■■■□□ 2.14
LIMD2-204ENST00000578297 ARID4AP29374 1257 aaPredicted RBP28.43■■■□□ 2.14
LIMD2-204ENST00000578297 CRKP46108 304 aa28.43■■■□□ 2.14
LIMD2-204ENST00000578297 APOBEC3FQ8IUX4 373 aaKnown RBP28.43■■■□□ 2.14
LIMD2-204ENST00000578297 ZNF408Q9H9D4 720 aa28.43■■■□□ 2.14
LIMD2-204ENST00000578297 ECM29Q5VYK3 1845 aa28.43■■■□□ 2.14
LIMD2-204ENST00000578297 CDCA5Q96FF9 252 aa28.42■■■□□ 2.14
LIMD2-204ENST00000578297 ABT1Q9ULW3 272 aaKnown RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms