RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 U2AF1L5P0DN76 240 aaPredicted RBP10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 AIMP1Q12904 312 aaKnown RBP10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 TMC4Q7Z404 712 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 XAGE3Q8WTP9 111 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 NECTIN2Q92692 538 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 SHISA4Q96DD7 197 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 FAM89AQ96GI7 184 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 PTPN18Q99952 460 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 EFCC1Q9HA90 598 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 SEC31BQ9NQW1 1179 aa10.64□□□□□ -0.71
SLC46A1-201ENST00000578217 LAMB1P07942 1786 aa10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 WNT10BO00744 389 aa10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 UFL1O94874 794 aa10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 EIF2S2P20042 333 aaKnown RBP10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 SF3B3Q15393 1217 aaKnown RBP10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 RTL5Q5HYW3 569 aaPredicted RBP10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 COPS6Q7L5N1 327 aa10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 ANGEL1Q9UNK9 670 aaKnown RBP10.63□□□□□ -0.71
SLC46A1-201ENST00000578217 SH3TC2Q8TF17 1288 aa10.62□□□□□ -0.71
SLC46A1-201ENST00000578217 ERO1AQ96HE7 468 aa10.62□□□□□ -0.71
SLC46A1-201ENST00000578217 WNK4Q96J92 1243 aa10.62□□□□□ -0.71
SLC46A1-201ENST00000578217 EYA3Q99504 573 aa10.62□□□□□ -0.71
SLC46A1-201ENST00000578217 ZC3H12CQ9C0D7 883 aaKnown RBP10.62□□□□□ -0.71
SLC46A1-201ENST00000578217 ERBB4Q15303 1308 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 ALDH1A1P00352 501 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 RPS8P62241 208 aaKnown RBP10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 SLC4A8Q2Y0W8 1093 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 ARHGAP39Q9C0H5 1083 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 CRISPLD2Q9H0B8 497 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
SLC46A1-201ENST00000578217 AOX1Q06278 1338 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 USP17L3A6NCW0 530 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 USP17L4A6NCW7 530 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 MANSC4A6NHS7 340 aaPredicted RBP10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 SP3Q02447 781 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 KRT24Q2M2I5 525 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 DACT2Q5SW24 774 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 USP17L1Q7RTZ2 530 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 ARMC9Q7Z3E5 817 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 SPNS2Q8IVW8 549 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 PCDHAC2Q9Y5I4 1007 aa10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 SPTBN5Q9NRC6 3674 aaKnown RBP10.6□□□□□ -0.71
SLC46A1-201ENST00000578217 MTFR1Q15390 333 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 SLC9C1Q4G0N8 1177 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 UBE2Q1Q7Z7E8 422 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 SLC10A4Q96EP9 437 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 ZBED3Q96IU2 234 aaPredicted RBP10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 ISCA1Q9BUE6 129 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 COL25A1Q9BXS0 654 aaPredicted RBP10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 ANKIB1Q9P2G1 1089 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 GGA1Q9UJY5 639 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 LAMA2P24043 3122 aaKnown RBP10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 PRUNE2Q8WUY3 3088 aa10.59□□□□□ -0.71
SLC46A1-201ENST00000578217 EYSQ5T1H1 3165 aa10.58□□□□□ -0.72
SLC46A1-201ENST00000578217 NF2P35240 595 aa10.58□□□□□ -0.72
SLC46A1-201ENST00000578217 Q7L0L9 218 aa10.58□□□□□ -0.72
SLC46A1-201ENST00000578217 TXNRD3Q86VQ6 643 aa10.58□□□□□ -0.72
SLC46A1-201ENST00000578217 PNISRQ8TF01 805 aaKnown RBP10.58□□□□□ -0.72
SLC46A1-201ENST00000578217 DPF3Q92784 378 aa10.58□□□□□ -0.72
SLC46A1-201ENST00000578217 OTOFQ9HC10 1997 aa10.57□□□□□ -0.72
SLC46A1-201ENST00000578217 ZBTB48P10074 688 aaPredicted RBP10.57□□□□□ -0.72
SLC46A1-201ENST00000578217 MAP3K11Q16584 847 aa10.57□□□□□ -0.72
SLC46A1-201ENST00000578217 HSP90AB3PQ58FF7 597 aa10.57□□□□□ -0.72
SLC46A1-201ENST00000578217 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
SLC46A1-201ENST00000578217 CCDC85AQ96PX6 553 aaPredicted RBP10.57□□□□□ -0.72
SLC46A1-201ENST00000578217 IRS4O14654 1257 aaPredicted RBP10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 CTGFP29279 349 aa10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 INHBEP58166 350 aa10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 BRI3BPQ8WY22 251 aa10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 DEFB129Q9H1M3 183 aa10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
SLC46A1-201ENST00000578217 TESPA1A2RU30 521 aaPredicted RBP10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 KLRK1P26718 216 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 PDE4AP27815 886 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 KIAA0825Q8IV33 1275 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 TMC2Q8TDI7 906 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 FBXW7Q969H0 707 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 CFAP53Q96M91 514 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 CHPF2Q9P2E5 772 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
SLC46A1-201ENST00000578217 ALPK3Q96L96 1907 aa10.54□□□□□ -0.72
SLC46A1-201ENST00000578217 USP2O75604 605 aaPredicted RBP10.54□□□□□ -0.72
SLC46A1-201ENST00000578217 FOXK1P85037 733 aa10.54□□□□□ -0.72
SLC46A1-201ENST00000578217 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
SLC46A1-201ENST00000578217 NBPF12Q5TAG4 269 aaPredicted RBP10.54□□□□□ -0.72
SLC46A1-201ENST00000578217 PODNQ7Z5L7 613 aa10.54□□□□□ -0.72
SLC46A1-201ENST00000578217 APOBEC3FQ8IUX4 373 aaKnown RBP10.54□□□□□ -0.72
SLC46A1-201ENST00000578217 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms