RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 ATP2B3Q16720 1220 aa14.42□□□□□ -0.1
GGA3-204ENST00000578208 ANGEL2Q5VTE6 544 aaKnown RBP14.42□□□□□ -0.1
GGA3-204ENST00000578208 ATG9AQ7Z3C6 839 aa14.42□□□□□ -0.1
GGA3-204ENST00000578208 FBXO33Q7Z6M2 555 aa14.42□□□□□ -0.1
GGA3-204ENST00000578208 MKRN1Q9UHC7 482 aaKnown RBP14.42□□□□□ -0.1
GGA3-204ENST00000578208 JAG2Q9Y219 1238 aa14.42□□□□□ -0.1
GGA3-204ENST00000578208 FAM205AQ6ZU69 1335 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 F8W031 263 aaPredicted RBP14.41□□□□□ -0.1
GGA3-204ENST00000578208 RLBP1P12271 317 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 FGFR2P21802 821 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 FMR1Q06787 632 aaKnown RBP eCLIP14.41□□□□□ -0.1
GGA3-204ENST00000578208 CHAF1AQ13111 956 aaPredicted RBP14.41□□□□□ -0.1
GGA3-204ENST00000578208 MFSD14BQ5SR56 506 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 PANK1Q8TE04 598 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 CNTNAP1P78357 1384 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 TRPM7Q96QT4 1865 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 PITPNM2Q9BZ72 1349 aa14.41□□□□□ -0.1
GGA3-204ENST00000578208 ADM5C9JUS6 153 aa14.4□□□□□ -0.1
GGA3-204ENST00000578208 G3BP1Q13283 466 aaKnown RBP eCLIP14.4□□□□□ -0.1
GGA3-204ENST00000578208 DLGAP5Q15398 846 aa14.4□□□□□ -0.1
GGA3-204ENST00000578208 PAXIP1Q6ZW49 1069 aaPredicted RBP14.4□□□□□ -0.1
GGA3-204ENST00000578208 CERS5Q8N5B7 392 aa14.4□□□□□ -0.1
GGA3-204ENST00000578208 TBC1D22AQ8WUA7 517 aa14.4□□□□□ -0.1
GGA3-204ENST00000578208 C1orf115Q9H7X2 142 aa14.4□□□□□ -0.1
GGA3-204ENST00000578208 GNL3LQ9NVN8 582 aaKnown RBP14.4□□□□□ -0.1
GGA3-204ENST00000578208 IQSEC3Q9UPP2 1182 aaPredicted RBP14.4□□□□□ -0.1
GGA3-204ENST00000578208 AKAP2Q9Y2D5 859 aa14.4□□□□□ -0.1
GGA3-204ENST00000578208 ARAP2Q8WZ64 1704 aa14.39□□□□□ -0.11
GGA3-204ENST00000578208 WNT10BO00744 389 aa14.39□□□□□ -0.11
GGA3-204ENST00000578208 MYO1BO43795 1136 aa14.39□□□□□ -0.11
GGA3-204ENST00000578208 BCAMP50895 628 aa14.39□□□□□ -0.11
GGA3-204ENST00000578208 RBM5P52756 815 aaKnown RBP eCLIP14.39□□□□□ -0.11
GGA3-204ENST00000578208 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
GGA3-204ENST00000578208 DEFB115Q30KQ5 88 aa14.39□□□□□ -0.11
GGA3-204ENST00000578208 NBPF9Q3BBW0 867 aa14.39□□□□□ -0.11
GGA3-204ENST00000578208 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
GGA3-204ENST00000578208 CHMP4BQ9H444 224 aaKnown RBP14.39□□□□□ -0.11
GGA3-204ENST00000578208 ASTN2O75129 1339 aaPredicted RBP14.39□□□□□ -0.11
GGA3-204ENST00000578208 PNMA6EA0A0J9YXQ4 647 aa14.38□□□□□ -0.11
GGA3-204ENST00000578208 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
GGA3-204ENST00000578208 ZBTB7BO15156 539 aaPredicted RBP14.38□□□□□ -0.11
GGA3-204ENST00000578208 APOBEC3FQ8IUX4 373 aaKnown RBP14.38□□□□□ -0.11
GGA3-204ENST00000578208 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
GGA3-204ENST00000578208 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
GGA3-204ENST00000578208 TTF2Q9UNY4 1162 aaKnown RBP14.38□□□□□ -0.11
GGA3-204ENST00000578208 TLL2Q9Y6L7 1015 aa14.38□□□□□ -0.11
GGA3-204ENST00000578208 ECE1P42892 770 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 ATP8B2P98198 1209 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 TFCP2Q12800 502 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 MVPQ14764 893 aaKnown RBP14.37□□□□□ -0.11
GGA3-204ENST00000578208 CFAP100Q494V2 611 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 CST9Q5W186 159 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 MTMR14Q8NCE2 650 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
GGA3-204ENST00000578208 MAST3O60307 1309 aa14.37□□□□□ -0.11
GGA3-204ENST00000578208 A0A1B0GUL7 405 aa14.36□□□□□ -0.11
GGA3-204ENST00000578208 GORABQ5T7V8 394 aa14.36□□□□□ -0.11
GGA3-204ENST00000578208 WDR66Q8TBY9 1149 aa14.36□□□□□ -0.11
GGA3-204ENST00000578208 SSH3Q8TE77 659 aa14.36□□□□□ -0.11
GGA3-204ENST00000578208 CDCA5Q96FF9 252 aa14.36□□□□□ -0.11
GGA3-204ENST00000578208 SERPINA10Q9UK55 444 aa14.36□□□□□ -0.11
GGA3-204ENST00000578208 CEP350Q5VT06 3117 aa14.36□□□□□ -0.11
GGA3-204ENST00000578208 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 SEMA3EO15041 775 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 NF2P35240 595 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 VEGFBP49765 207 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 GRM1Q13255 1194 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 POLA2Q14181 598 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 ZBED3Q96IU2 234 aaPredicted RBP14.35□□□□□ -0.11
GGA3-204ENST00000578208 NEUROD6Q96NK8 337 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 DENND2AQ9ULE3 1009 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 COG6Q9Y2V7 657 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 SUGT1Q9Y2Z0 365 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 MYH13Q9UKX3 1938 aa14.35□□□□□ -0.11
GGA3-204ENST00000578208 COL1A1P02452 1464 aaPredicted RBP14.34□□□□□ -0.11
GGA3-204ENST00000578208 SURF6O75683 361 aaKnown RBP14.34□□□□□ -0.11
GGA3-204ENST00000578208 HUNKP57058 714 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 PDE3AQ14432 1141 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 CEP85Q6P2H3 762 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 DLK2Q6UY11 383 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 SAPCD2Q86UD0 394 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 HHIPL1Q96JK4 782 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 CAPNS2Q96L46 248 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 VEZTQ9HBM0 779 aa14.34□□□□□ -0.11
GGA3-204ENST00000578208 WDR33Q9C0J8 1336 aaKnown RBP14.34□□□□□ -0.11
GGA3-204ENST00000578208 CLRN2A0PK11 232 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 HMMRO75330 724 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 ADORA1P30542 326 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 PHKA1P46020 1223 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 CRKP46108 304 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 TIMM10P62072 90 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 HDLBPQ00341 1268 aaKnown RBP14.33□□□□□ -0.12
GGA3-204ENST00000578208 TNFAIP1Q13829 316 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 TTLL12Q14166 644 aaPredicted RBP14.33□□□□□ -0.12
GGA3-204ENST00000578208 CCDC102BQ68D86 513 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 ZGPATQ8N5A5 531 aaKnown RBP14.33□□□□□ -0.12
GGA3-204ENST00000578208 TEKT1Q969V4 418 aa14.33□□□□□ -0.12
GGA3-204ENST00000578208 XAGE2Q96GT9 111 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms