RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 IQCA1LA6NCM1 817 aa24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 IGHDP01880 384 aa24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 TLR7Q9NYK1 1049 aaKnown RBP24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 CNOT7Q9UIV1 285 aaKnown RBP24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 HACL1Q9UJ83 578 aa24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 JAG2Q9Y219 1238 aa24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 FKBP1AP62942 108 aaKnown RBP24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 CLASRPQ8N2M8 674 aaKnown RBP24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 FBXW7Q969H0 707 aa24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 LRRCC1Q9C099 1032 aa24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 TAF1DQ9H5J8 278 aaPredicted RBP24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 GNL3LQ9NVN8 582 aaKnown RBP24.61■■□□□ 1.53
SUPT4H1-202ENST00000577396 SHTN1A0MZ66 631 aa24.6■■□□□ 1.53
SUPT4H1-202ENST00000577396 AACSQ86V21 672 aa24.6■■□□□ 1.53
SUPT4H1-202ENST00000577396 SCN4AP35499 1836 aa24.6■■□□□ 1.53
SUPT4H1-202ENST00000577396 MYO3BQ8WXR4 1341 aa24.59■■□□□ 1.53
SUPT4H1-202ENST00000577396 SEMA3EO15041 775 aa24.59■■□□□ 1.53
SUPT4H1-202ENST00000577396 FRAT2O75474 233 aaPredicted RBP24.59■■□□□ 1.53
SUPT4H1-202ENST00000577396 RWDD1Q9H446 243 aaPredicted RBP24.59■■□□□ 1.53
SUPT4H1-202ENST00000577396 SMARCA5O60264 1052 aaPredicted RBP24.58■■□□□ 1.53
SUPT4H1-202ENST00000577396 LMOD1P29536 600 aaPredicted RBP24.58■■□□□ 1.53
SUPT4H1-202ENST00000577396 EPHX2P34913 555 aa24.58■■□□□ 1.53
SUPT4H1-202ENST00000577396 GORABQ5T7V8 394 aa24.58■■□□□ 1.53
SUPT4H1-202ENST00000577396 ARID4AP29374 1257 aaPredicted RBP24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 RASGRF1Q13972 1273 aa24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 MICALL2Q8IY33 904 aa24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 COL1A1P02452 1464 aaPredicted RBP24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 USP17L8P0C7I0 530 aa24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 ZNF280AP59817 542 aaPredicted RBP24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 CHAF1AQ13111 956 aaPredicted RBP24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 GCC1Q96CN9 775 aa24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 ZNF512BQ96KM6 892 aaPredicted RBP24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 DENND2AQ9ULE3 1009 aa24.57■■□□□ 1.52
SUPT4H1-202ENST00000577396 CCDC158Q5M9N0 1113 aa24.56■■□□□ 1.52
SUPT4H1-202ENST00000577396 MFSD14BQ5SR56 506 aa24.56■■□□□ 1.52
SUPT4H1-202ENST00000577396 SMC5Q8IY18 1101 aa24.56■■□□□ 1.52
SUPT4H1-202ENST00000577396 H7C1D1 291 aa24.55■■□□□ 1.52
SUPT4H1-202ENST00000577396 SCARF1Q14162 830 aa24.55■■□□□ 1.52
SUPT4H1-202ENST00000577396 GRIK5Q16478 980 aa24.55■■□□□ 1.52
SUPT4H1-202ENST00000577396 TBC1D22AQ8WUA7 517 aa24.55■■□□□ 1.52
SUPT4H1-202ENST00000577396 ADARB2Q9NS39 739 aaKnown RBP24.55■■□□□ 1.52
SUPT4H1-202ENST00000577396 HMG20BQ9P0W2 317 aa24.55■■□□□ 1.52
SUPT4H1-202ENST00000577396 PDS5AQ29RF7 1337 aaKnown RBP24.55■■□□□ 1.52
SUPT4H1-202ENST00000577396 EGFRP00533 1210 aa24.54■■□□□ 1.52
SUPT4H1-202ENST00000577396 UQCRFS1P1P0C7P4 283 aa24.54■■□□□ 1.52
SUPT4H1-202ENST00000577396 KIAA0825Q8IV33 1275 aa24.54■■□□□ 1.52
SUPT4H1-202ENST00000577396 WDR66Q8TBY9 1149 aa24.54■■□□□ 1.52
SUPT4H1-202ENST00000577396 IFIT2P09913 472 aaKnown RBP24.53■■□□□ 1.52
SUPT4H1-202ENST00000577396 MCAMP43121 646 aa24.53■■□□□ 1.52
SUPT4H1-202ENST00000577396 HIRAP54198 1017 aaPredicted RBP24.53■■□□□ 1.52
SUPT4H1-202ENST00000577396 SAMD7Q7Z3H4 446 aa24.53■■□□□ 1.52
SUPT4H1-202ENST00000577396 PNMA8AQ86V59 439 aaPredicted RBP24.53■■□□□ 1.52
SUPT4H1-202ENST00000577396 MMP14P50281 582 aa24.53■■□□□ 1.52
SUPT4H1-202ENST00000577396 USP50Q70EL3 339 aaPredicted RBP24.53■■□□□ 1.52
SUPT4H1-202ENST00000577396 SALL1Q9NSC2 1324 aa24.52■■□□□ 1.52
SUPT4H1-202ENST00000577396 POTEIP0CG38 1075 aa24.52■■□□□ 1.52
SUPT4H1-202ENST00000577396 POTEJP0CG39 1038 aa24.52■■□□□ 1.52
SUPT4H1-202ENST00000577396 TTC39AQ5SRH9 613 aa24.52■■□□□ 1.52
SUPT4H1-202ENST00000577396 PI16Q6UXB8 463 aa24.52■■□□□ 1.52
SUPT4H1-202ENST00000577396 SPATA5Q8NB90 893 aa24.52■■□□□ 1.52
SUPT4H1-202ENST00000577396 TRPM4Q8TD43 1214 aa24.52■■□□□ 1.52
SUPT4H1-202ENST00000577396 OGFOD1Q8N543 542 aa24.51■■□□□ 1.51
SUPT4H1-202ENST00000577396 BCL11AQ9H165 835 aa24.51■■□□□ 1.51
SUPT4H1-202ENST00000577396 SUGT1Q9Y2Z0 365 aa24.51■■□□□ 1.51
SUPT4H1-202ENST00000577396 TOMM70O94826 608 aa24.5■■□□□ 1.51
SUPT4H1-202ENST00000577396 TBC1D10BQ4KMP7 808 aaPredicted RBP24.5■■□□□ 1.51
SUPT4H1-202ENST00000577396 ANKRD45Q5TZF3 282 aa24.5■■□□□ 1.51
SUPT4H1-202ENST00000577396 C16orf71Q8IYS4 520 aaPredicted RBP24.5■■□□□ 1.51
SUPT4H1-202ENST00000577396 MYOZ2Q9NPC6 264 aa24.5■■□□□ 1.51
SUPT4H1-202ENST00000577396 F8W031 263 aaPredicted RBP24.5■■□□□ 1.51
SUPT4H1-202ENST00000577396 EAPPQ56P03 285 aaPredicted RBP24.49■■□□□ 1.51
SUPT4H1-202ENST00000577396 PGAP2Q9UHJ9 254 aa24.49■■□□□ 1.51
SUPT4H1-202ENST00000577396 TTF2Q9UNY4 1162 aaKnown RBP24.49■■□□□ 1.51
SUPT4H1-202ENST00000577396 AKAP11Q9UKA4 1901 aa24.49■■□□□ 1.51
SUPT4H1-202ENST00000577396 MYH13Q9UKX3 1938 aa24.48■■□□□ 1.51
SUPT4H1-202ENST00000577396 RBM26Q5T8P6 1007 aaKnown RBP24.48■■□□□ 1.51
SUPT4H1-202ENST00000577396 MRIQ9BWK5 157 aa24.48■■□□□ 1.51
SUPT4H1-202ENST00000577396 SNRKQ9NRH2 765 aa24.48■■□□□ 1.51
SUPT4H1-202ENST00000577396 HDAC9Q9UKV0 1011 aa24.48■■□□□ 1.51
SUPT4H1-202ENST00000577396 PRDX5P30044 214 aa24.47■■□□□ 1.51
SUPT4H1-202ENST00000577396 KIF4BQ2VIQ3 1234 aa24.47■■□□□ 1.51
SUPT4H1-202ENST00000577396 LDHDQ86WU2 507 aa24.47■■□□□ 1.51
SUPT4H1-202ENST00000577396 ZBED3Q96IU2 234 aaPredicted RBP24.47■■□□□ 1.51
SUPT4H1-202ENST00000577396 ADAMTSL1Q8N6G6 1762 aa24.47■■□□□ 1.51
SUPT4H1-202ENST00000577396 ZAP70P43403 619 aa24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 TBC1D9Q6ZT07 1266 aa24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 MTMR14Q8NCE2 650 aa24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 RBM46Q8TBY0 533 aaKnown RBP24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 CYP2E1P05181 493 aaPredicted RBP24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 ATP5JP18859 108 aa24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 HDLBPQ00341 1268 aaKnown RBP24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 ZC3H15Q8WU90 426 aaKnown RBP24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 SERPINA10Q9UK55 444 aa24.46■■□□□ 1.51
SUPT4H1-202ENST00000577396 NUCB1Q02818 461 aa24.45■■□□□ 1.5
SUPT4H1-202ENST00000577396 B4GALNT3Q6L9W6 998 aa24.45■■□□□ 1.5
SUPT4H1-202ENST00000577396 ZGPATQ8N5A5 531 aaKnown RBP24.45■■□□□ 1.5
SUPT4H1-202ENST00000577396 OTUD7AQ8TE49 926 aaPredicted RBP24.45■■□□□ 1.5
SUPT4H1-202ENST00000577396 ABCF2Q9UG63 623 aa24.45■■□□□ 1.5
SUPT4H1-202ENST00000577396 PCDHAC2Q9Y5I4 1007 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms