RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SCARF1Q14162 830 aa29.15■■■□□ 2.26
SNF8-217ENST00000576353 ATP2B3Q16720 1220 aa29.15■■■□□ 2.26
SNF8-217ENST00000576353 TRAF5O00463 557 aa29.14■■■□□ 2.26
SNF8-217ENST00000576353 MVPQ14764 893 aaKnown RBP29.14■■■□□ 2.26
SNF8-217ENST00000576353 CERS5Q8N5B7 392 aa29.14■■■□□ 2.26
SNF8-217ENST00000576353 C1orf115Q9H7X2 142 aa29.14■■■□□ 2.26
SNF8-217ENST00000576353 G3BP1Q13283 466 aaKnown RBP eCLIP29.13■■■□□ 2.25
SNF8-217ENST00000576353 KRT26Q7Z3Y9 468 aa29.13■■■□□ 2.25
SNF8-217ENST00000576353 DDX19BQ9UMR2 479 aa29.13■■■□□ 2.25
SNF8-217ENST00000576353 JAG2Q9Y219 1238 aa29.13■■■□□ 2.25
SNF8-217ENST00000576353 POLA2Q14181 598 aa29.12■■■□□ 2.25
SNF8-217ENST00000576353 USP48Q86UV5 1035 aa29.12■■■□□ 2.25
SNF8-217ENST00000576353 SSH3Q8TE77 659 aa29.12■■■□□ 2.25
SNF8-217ENST00000576353 KLRG1Q96E93 195 aa29.12■■■□□ 2.25
SNF8-217ENST00000576353 CHMP4BQ9H444 224 aaKnown RBP29.12■■■□□ 2.25
SNF8-217ENST00000576353 GGA3Q9NZ52 723 aa29.12■■■□□ 2.25
SNF8-217ENST00000576353 AKAP2Q9Y2D5 859 aa29.12■■■□□ 2.25
SNF8-217ENST00000576353 CEP350Q5VT06 3117 aa29.11■■■□□ 2.25
SNF8-217ENST00000576353 PDE3AQ14432 1141 aa29.11■■■□□ 2.25
SNF8-217ENST00000576353 MFSD14BQ5SR56 506 aa29.11■■■□□ 2.25
SNF8-217ENST00000576353 SULF1Q8IWU6 871 aa29.11■■■□□ 2.25
SNF8-217ENST00000576353 IQSEC3Q9UPP2 1182 aaPredicted RBP29.11■■■□□ 2.25
SNF8-217ENST00000576353 COG6Q9Y2V7 657 aa29.11■■■□□ 2.25
SNF8-217ENST00000576353 FMR1Q06787 632 aaKnown RBP eCLIP29.1■■■□□ 2.25
SNF8-217ENST00000576353 TFCP2Q12800 502 aa29.09■■■□□ 2.25
SNF8-217ENST00000576353 ANGEL2Q5VTE6 544 aaKnown RBP29.09■■■□□ 2.25
SNF8-217ENST00000576353 TBC1D22AQ8WUA7 517 aa29.09■■■□□ 2.25
SNF8-217ENST00000576353 GNL3LQ9NVN8 582 aaKnown RBP29.09■■■□□ 2.25
SNF8-217ENST00000576353 ASTN2O75129 1339 aaPredicted RBP29.09■■■□□ 2.25
SNF8-217ENST00000576353 F8W031 263 aaPredicted RBP29.08■■■□□ 2.25
SNF8-217ENST00000576353 WNT10BO00744 389 aa29.08■■■□□ 2.25
SNF8-217ENST00000576353 CHAF1AQ13111 956 aaPredicted RBP29.08■■■□□ 2.25
SNF8-217ENST00000576353 NBPF9Q3BBW0 867 aa29.08■■■□□ 2.25
SNF8-217ENST00000576353 PITPNM2Q9BZ72 1349 aa29.08■■■□□ 2.25
SNF8-217ENST00000576353 ZNF646O15015 1829 aaPredicted RBP29.07■■■□□ 2.24
SNF8-217ENST00000576353 CELF2O95319 508 aaKnown RBP29.07■■■□□ 2.24
SNF8-217ENST00000576353 DLGAP5Q15398 846 aa29.07■■■□□ 2.24
SNF8-217ENST00000576353 CST9Q5W186 159 aa29.07■■■□□ 2.24
SNF8-217ENST00000576353 CEP85Q6P2H3 762 aa29.06■■■□□ 2.24
SNF8-217ENST00000576353 MTMR14Q8NCE2 650 aa29.06■■■□□ 2.24
SNF8-217ENST00000576353 ABT1Q9ULW3 272 aaKnown RBP29.06■■■□□ 2.24
SNF8-217ENST00000576353 SURF6O75683 361 aaKnown RBP29.05■■■□□ 2.24
SNF8-217ENST00000576353 TIMM10P62072 90 aa29.05■■■□□ 2.24
SNF8-217ENST00000576353 ZBED3Q96IU2 234 aaPredicted RBP29.05■■■□□ 2.24
SNF8-217ENST00000576353 A0A1B0GUL7 405 aa29.04■■■□□ 2.24
SNF8-217ENST00000576353 ADM5C9JUS6 153 aa29.04■■■□□ 2.24
SNF8-217ENST00000576353 OS9Q13438 667 aaPredicted RBP29.04■■■□□ 2.24
SNF8-217ENST00000576353 ZNF408Q9H9D4 720 aa29.04■■■□□ 2.24
SNF8-217ENST00000576353 ZBTB40Q9NUA8 1239 aa29.04■■■□□ 2.24
SNF8-217ENST00000576353 MKRN1Q9UHC7 482 aaKnown RBP29.04■■■□□ 2.24
SNF8-217ENST00000576353 TTF2Q9UNY4 1162 aaKnown RBP29.04■■■□□ 2.24
SNF8-217ENST00000576353 WDR66Q8TBY9 1149 aa29.03■■■□□ 2.24
SNF8-217ENST00000576353 NOP58Q9Y2X3 529 aaKnown RBP29.03■■■□□ 2.24
SNF8-217ENST00000576353 SEMA3EO15041 775 aa29.02■■■□□ 2.24
SNF8-217ENST00000576353 DEFB115Q30KQ5 88 aa29.02■■■□□ 2.24
SNF8-217ENST00000576353 CFAP100Q494V2 611 aa29.02■■■□□ 2.24
SNF8-217ENST00000576353 NEUROD6Q96NK8 337 aa29.02■■■□□ 2.24
SNF8-217ENST00000576353 SERPINA10Q9UK55 444 aa29.02■■■□□ 2.24
SNF8-217ENST00000576353 SUGT1Q9Y2Z0 365 aa29.02■■■□□ 2.24
SNF8-217ENST00000576353 CNTNAP1P78357 1384 aa29.01■■■□□ 2.24
SNF8-217ENST00000576353 RASSF10A6NK89 507 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 ZBTB22O15209 634 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 MYO1BO43795 1136 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 ADORA1P30542 326 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 PHKA1P46020 1223 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 RBM5P52756 815 aaKnown RBP eCLIP29.01■■■□□ 2.23
SNF8-217ENST00000576353 C20orf194Q5TEA3 1177 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 CCDC102BQ68D86 513 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 RPAP2Q8IXW5 612 aaPredicted RBP29.01■■■□□ 2.23
SNF8-217ENST00000576353 XAGE2Q96GT9 111 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 DENND2AQ9ULE3 1009 aa29.01■■■□□ 2.23
SNF8-217ENST00000576353 DLK2Q6UY11 383 aa29■■■□□ 2.23
SNF8-217ENST00000576353 JMYQ8N9B5 988 aa29■■■□□ 2.23
SNF8-217ENST00000576353 TLL2Q9Y6L7 1015 aa29■■■□□ 2.23
SNF8-217ENST00000576353 SPDYE2BA6NHP3 402 aa28.99■■■□□ 2.23
SNF8-217ENST00000576353 SPDYE6P0CI01 402 aa28.99■■■□□ 2.23
SNF8-217ENST00000576353 HDLBPQ00341 1268 aaKnown RBP28.99■■■□□ 2.23
SNF8-217ENST00000576353 APOBEC3FQ8IUX4 373 aaKnown RBP28.99■■■□□ 2.23
SNF8-217ENST00000576353 GPR108Q9NPR9 543 aa28.99■■■□□ 2.23
SNF8-217ENST00000576353 GORABQ5T7V8 394 aa28.98■■■□□ 2.23
SNF8-217ENST00000576353 CDCA5Q96FF9 252 aa28.98■■■□□ 2.23
SNF8-217ENST00000576353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.98■■■□□ 2.23
SNF8-217ENST00000576353 HMMRO75330 724 aa28.97■■■□□ 2.23
SNF8-217ENST00000576353 SAPCD2Q86UD0 394 aa28.97■■■□□ 2.23
SNF8-217ENST00000576353 PRMT6Q96LA8 375 aaPredicted RBP28.97■■■□□ 2.23
SNF8-217ENST00000576353 MRIQ9BWK5 157 aa28.97■■■□□ 2.23
SNF8-217ENST00000576353 MAST3O60307 1309 aa28.96■■■□□ 2.23
SNF8-217ENST00000576353 CRKP46108 304 aa28.96■■■□□ 2.23
SNF8-217ENST00000576353 GRIK5Q16478 980 aa28.96■■■□□ 2.23
SNF8-217ENST00000576353 C2orf69Q8N8R5 385 aa28.96■■■□□ 2.23
SNF8-217ENST00000576353 GBA2Q9HCG7 927 aaPredicted RBP28.96■■■□□ 2.23
SNF8-217ENST00000576353 PCDHAC2Q9Y5I4 1007 aa28.96■■■□□ 2.23
SNF8-217ENST00000576353 HSP90AB4PQ58FF6 505 aa28.95■■■□□ 2.22
SNF8-217ENST00000576353 TRPM7Q96QT4 1865 aa28.95■■■□□ 2.22
SNF8-217ENST00000576353 VEGFBP49765 207 aa28.94■■■□□ 2.22
SNF8-217ENST00000576353 TNNI3KQ59H18 835 aa28.94■■■□□ 2.22
SNF8-217ENST00000576353 ERC1Q8IUD2 1116 aa28.94■■■□□ 2.22
SNF8-217ENST00000576353 TEKT1Q969V4 418 aa28.94■■■□□ 2.22
SNF8-217ENST00000576353 HHIPL1Q96JK4 782 aa28.94■■■□□ 2.22
SNF8-217ENST00000576353 SCAF8Q9UPN6 1271 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms