RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 PPP2R3AQ06190 1150 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 CC2D1AQ6P1N0 951 aaPredicted RBP16.8■□□□□ 0.28
SCARF1-209ENST00000576012 FOXR1Q6PIV2 292 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 KSR2Q6VAB6 950 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 THEMISQ8N1K5 641 aaPredicted RBP16.8■□□□□ 0.28
SCARF1-209ENST00000576012 MYD88Q99836 296 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 RASSF4Q9H2L5 321 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 PARP3Q9Y6F1 533 aa16.8■□□□□ 0.28
SCARF1-209ENST00000576012 SPTLC2O15270 562 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 CCDC12Q8WUD4 166 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-209ENST00000576012 C8orf76Q96K31 380 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 SNRKQ9NRH2 765 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 A0A0U1RQJ8 604 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-209ENST00000576012 H3BQF6 201 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 N4BP1O75113 896 aaKnown RBP16.79■□□□□ 0.28
SCARF1-209ENST00000576012 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 ZNF827Q17R98 1081 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 TOGARAM2Q6ZUX3 1019 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 DHX32Q7L7V1 743 aaKnown RBP16.79■□□□□ 0.28
SCARF1-209ENST00000576012 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
SCARF1-209ENST00000576012 TXLNBQ8N3L3 684 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 ATRIPQ8WXE1 791 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 CLIC6Q96NY7 704 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 ADAM21Q9UKJ8 722 aa16.79■□□□□ 0.28
SCARF1-209ENST00000576012 MTF1Q14872 753 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 DHX58Q96C10 678 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 IMPACTQ9P2X3 320 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 PFKFB2O60825 505 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 TIMM10P62072 90 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 MCMDC2Q4G0Z9 681 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 SBNO1A3KN83 1393 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 CPLX1O14810 134 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 RHOXF2BP0C7M4 288 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 PFKFB1P16118 471 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 NCAPHQ15003 741 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
SCARF1-209ENST00000576012 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 PDE11AQ9HCR9 933 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 PPP2R2CQ9Y2T4 447 aa16.78■□□□□ 0.28
SCARF1-209ENST00000576012 GIGYF1O75420 1035 aaPredicted RBP16.77■□□□□ 0.28
SCARF1-209ENST00000576012 PDIA3P30101 505 aaKnown RBP16.77■□□□□ 0.28
SCARF1-209ENST00000576012 ADALQ6DHV7 355 aa16.77■□□□□ 0.28
SCARF1-209ENST00000576012 UBE3BQ7Z3V4 1068 aa16.77■□□□□ 0.28
SCARF1-209ENST00000576012 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
SCARF1-209ENST00000576012 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
SCARF1-209ENST00000576012 USP6P35125 1406 aa16.77■□□□□ 0.27
SCARF1-209ENST00000576012 REXO1L1PQ8IX06 675 aa16.77■□□□□ 0.27
SCARF1-209ENST00000576012 CNPY4Q8N129 248 aa16.77■□□□□ 0.27
SCARF1-209ENST00000576012 NRXN3Q9Y4C0 1643 aa16.77■□□□□ 0.27
SCARF1-209ENST00000576012 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 FOXN1O15353 648 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 FDPSP14324 419 aaKnown RBP16.76■□□□□ 0.27
SCARF1-209ENST00000576012 NAA16Q6N069 864 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-209ENST00000576012 SMARCC2Q8TAQ2 1214 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 OVOS2A0A0J9YW53 1432 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 OVOS2Q6IE36 1432 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 ALDH1L1O75891 902 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 HINFPQ9BQA5 517 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 RABEP2Q9H5N1 569 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 KIF28PB7ZC32 967 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 NLRP12P59046 1061 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 CCDC102AQ96A19 550 aa16.76■□□□□ 0.27
SCARF1-209ENST00000576012 EFCAB8A8MWE9 144 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 E7EWF7 191 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-209ENST00000576012 KCNA6P17658 529 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 GDAP1L1Q96MZ0 367 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 COBLO75128 1261 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 SYKP43405 635 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 LONRF2Q1L5Z9 754 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-209ENST00000576012 ZNF609O15014 1411 aa16.75■□□□□ 0.27
SCARF1-209ENST00000576012 PLEKHG3A1L390 1219 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 FKBP4Q02790 459 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCARF1-209ENST00000576012 AK7Q96M32 723 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 PEAK1Q9H792 1746 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 KLF18A0A0U1RQI7 1052 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 IGKV5-2P06315 115 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 WASHC4Q2M389 1173 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 TNNI3KQ59H18 835 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 BAG1Q99933 345 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-209ENST00000576012 FPGT-TNNI3KV9GXZ4 949 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 PLEKHG1Q9ULL1 1385 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 RRP15Q9Y3B9 282 aaKnown RBP16.74■□□□□ 0.27
SCARF1-209ENST00000576012 KDRP35968 1356 aa16.74■□□□□ 0.27
SCARF1-209ENST00000576012 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
SCARF1-209ENST00000576012 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
SCARF1-209ENST00000576012 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
SCARF1-209ENST00000576012 LONRF3Q496Y0 759 aa16.73■□□□□ 0.27
SCARF1-209ENST00000576012 KLHL10Q6JEL2 608 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms