RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
TOM1L1-222ENST00000575909 FRRS1LQ9P0K9 344 aa9.62□□□□□ -0.87
TOM1L1-222ENST00000575909 PTPRAP18433 802 aa9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 ADH7P40394 386 aa9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 MAP2K3P46734 347 aa9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 FAAP100Q0VG06 881 aa9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 TTBK2Q6IQ55 1244 aa9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 ELMSAN1Q6PJG2 1045 aa9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 ZNF296Q8WUU4 475 aaPredicted RBP9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 SEC16BQ96JE7 1060 aa9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 GPN3Q9UHW5 284 aaPredicted RBP9.61□□□□□ -0.87
TOM1L1-222ENST00000575909 F6X3S4 739 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 FGRP09769 529 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 LMNB2Q03252 620 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 GAS6Q14393 721 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 PERM1Q5SV97 790 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 AGMOQ6ZNB7 445 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 MCF2L2Q86YR7 1114 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 MDFIQ99750 246 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 NT5C1AQ9BXI3 368 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 ADAM19Q9H013 955 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 MBIPQ9NS73 344 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 KLF15Q9UIH9 416 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 SAMM50Q9Y512 469 aa9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 SUPT16HQ9Y5B9 1047 aaKnown RBP9.6□□□□□ -0.87
TOM1L1-222ENST00000575909 FBXL19Q6PCT2 694 aa9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 NPAS3Q8IXF0 933 aa9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 CACTIN-AS1Q8N1I8 211 aa9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 TTC9Q92623 222 aa9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 SMG9Q9H0W8 520 aaKnown RBP9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 NXF1Q9UBU9 619 aaKnown RBP9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 SOX13Q9UN79 622 aa9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 TLR6Q9Y2C9 796 aa9.59□□□□□ -0.87
TOM1L1-222ENST00000575909 FAM177BA6PVY3 158 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 GREM1O60565 184 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 B3GALT4O96024 378 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 PF4P02776 101 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 PCDH1Q08174 1060 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 RBL2Q08999 1139 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 CAMK2GQ13555 558 aaPredicted RBP9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 SOGA3Q5TF21 947 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 PCNX4Q63HM2 1172 aa9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 EAF1Q96JC9 268 aaPredicted RBP9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 DNAJC2Q99543 621 aaKnown RBP9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 HIRIP3Q9BW71 556 aaPredicted RBP9.58□□□□□ -0.88
TOM1L1-222ENST00000575909 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 ELOA3DA6NLF2 546 aaPredicted RBP9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 PAGE1O75459 146 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 GARTP22102 1010 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 COL9A2Q14055 689 aaPredicted RBP9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 ELOA3BQ3SY89 546 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 SNAP47Q5SQN1 464 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 VN1R5Q7Z5H4 357 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 ELOA3Q8NG57 546 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 LPIN3Q9BQK8 851 aa9.57□□□□□ -0.88
TOM1L1-222ENST00000575909 ROBO2Q9HCK4 1378 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 TFE3P19532 575 aaPredicted RBP9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 LMNB1P20700 586 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 ALAS2P22557 587 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 FAM160A1Q05DH4 1040 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 ZNF423Q2M1K9 1284 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 CCDC84Q86UT8 332 aaPredicted RBP9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 TRIM42Q8IWZ5 723 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 GOLM1Q8NBJ4 401 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 TRIM33Q9UPN9 1127 aa9.56□□□□□ -0.88
TOM1L1-222ENST00000575909 LCE2BO14633 110 aa9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 STK10O94804 968 aaKnown RBP9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 NME2P22392 152 aa9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 PSAPL1Q6NUJ1 521 aa9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 LACRTQ9GZZ8 138 aa9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 GGA1Q9UJY5 639 aa9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 CYP8B1Q9UNU6 501 aa9.55□□□□□ -0.88
TOM1L1-222ENST00000575909 H3BM21 787 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 BMP6P22004 513 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 CDC27P30260 824 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 ZNF157P51786 506 aaPredicted RBP9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 CABP4P57796 275 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 LRRC14Q15048 493 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 ADAMTSL4Q6UY14 1074 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 FAM196AQ6ZSG2 479 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 GOLGA6L1Q8N7Z2 621 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 GDF2Q9UK05 429 aaPredicted RBP9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 STRIP2Q9ULQ0 834 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 EFR3BQ9Y2G0 817 aa9.54□□□□□ -0.88
TOM1L1-222ENST00000575909 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 ESRRAP11474 423 aaPredicted RBP9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 SOX9P48436 509 aa9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 NASPP49321 788 aaPredicted RBP9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 APOBRQ0VD83 1088 aa9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 IKBKEQ14164 716 aa9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms