RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	HTRA3	P83110	453 aa		31.38	■■■□□ 2.61
SRRM2-223	ENST00000575701	SSH3	Q8TE77	659 aa		31.38	■■■□□ 2.61
SRRM2-223	ENST00000575701	DCPS	Q96C86	337 aa	Known RBP	31.38	■■■□□ 2.61
SRRM2-223	ENST00000575701	TRPM7	Q96QT4	1865 aa		31.38	■■■□□ 2.61
SRRM2-223	ENST00000575701	POLA2	Q14181	598 aa		31.37	■■■□□ 2.61
SRRM2-223	ENST00000575701	PDE3A	Q14432	1141 aa		31.37	■■■□□ 2.61
SRRM2-223	ENST00000575701	CERS5	Q8N5B7	392 aa		31.37	■■■□□ 2.61
SRRM2-223	ENST00000575701	DNAJC5G	Q8N7S2	189 aa		31.37	■■■□□ 2.61
SRRM2-223	ENST00000575701	C1orf115	Q9H7X2	142 aa		31.37	■■■□□ 2.61
SRRM2-223	ENST00000575701	FRAT2	O75474	233 aa	Predicted RBP	31.36	■■■□□ 2.61
SRRM2-223	ENST00000575701	BCAM	P50895	628 aa		31.36	■■■□□ 2.61
SRRM2-223	ENST00000575701	GLIS2	Q9BZE0	524 aa	Predicted RBP	31.36	■■■□□ 2.61
SRRM2-223	ENST00000575701	GGA3	Q9NZ52	723 aa		31.36	■■■□□ 2.61
SRRM2-223	ENST00000575701	AKAP2	Q9Y2D5	859 aa		31.36	■■■□□ 2.61
SRRM2-223	ENST00000575701	PITPNM2	Q9BZ72	1349 aa		31.35	■■■□□ 2.61
SRRM2-223	ENST00000575701	G3BP1	Q13283	466 aa	Known RBP eCLIP	31.35	■■■□□ 2.61
SRRM2-223	ENST00000575701	SCARF1	Q14162	830 aa		31.35	■■■□□ 2.61
SRRM2-223	ENST00000575701	MFSD14B	Q5SR56	506 aa		31.34	■■■□□ 2.61
SRRM2-223	ENST00000575701	TBC1D22A	Q8WUA7	517 aa		31.34	■■■□□ 2.61
SRRM2-223	ENST00000575701	KLRG1	Q96E93	195 aa		31.34	■■■□□ 2.61
SRRM2-223	ENST00000575701	COG6	Q9Y2V7	657 aa		31.34	■■■□□ 2.61
SRRM2-223	ENST00000575701	TRAF5	O00463	557 aa		31.33	■■■□□ 2.61
SRRM2-223	ENST00000575701	KRT26	Q7Z3Y9	468 aa		31.33	■■■□□ 2.61
SRRM2-223	ENST00000575701	SULF1	Q8IWU6	871 aa		31.33	■■■□□ 2.61
SRRM2-223	ENST00000575701	JAG2	Q9Y219	1238 aa		31.33	■■■□□ 2.61
SRRM2-223	ENST00000575701	CEP350	Q5VT06	3117 aa		31.33	■■■□□ 2.61
SRRM2-223	ENST00000575701	MYH13	Q9UKX3	1938 aa		31.32	■■■□□ 2.6
SRRM2-223	ENST00000575701	GNL3L	Q9NVN8	582 aa	Known RBP	31.32	■■■□□ 2.6
SRRM2-223	ENST00000575701	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.32	■■■□□ 2.6
SRRM2-223	ENST00000575701	WNT10B	O00744	389 aa		31.31	■■■□□ 2.6
SRRM2-223	ENST00000575701	ZBTB22	O15209	634 aa		31.31	■■■□□ 2.6
SRRM2-223	ENST00000575701	TFCP2	Q12800	502 aa		31.31	■■■□□ 2.6
SRRM2-223	ENST00000575701	ANGEL2	Q5VTE6	544 aa	Known RBP	31.31	■■■□□ 2.6
SRRM2-223	ENST00000575701	CEP85	Q6P2H3	762 aa		31.31	■■■□□ 2.6
SRRM2-223	ENST00000575701	USP48	Q86UV5	1035 aa		31.31	■■■□□ 2.6
SRRM2-223	ENST00000575701	MTMR14	Q8NCE2	650 aa		31.31	■■■□□ 2.6
SRRM2-223	ENST00000575701	CHAF1A	Q13111	956 aa	Predicted RBP	31.29	■■■□□ 2.6
SRRM2-223	ENST00000575701	DLGAP5	Q15398	846 aa		31.29	■■■□□ 2.6
SRRM2-223	ENST00000575701	NBPF9	Q3BBW0	867 aa		31.29	■■■□□ 2.6
SRRM2-223	ENST00000575701	POLR2A	P24928	1970 aa	Known RBP	31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701	ASTN2	O75129	1339 aa	Predicted RBP	31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701		A0A1B0GUL7	405 aa		31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701		F8W031	263 aa	Predicted RBP	31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701	SEMA3E	O15041	775 aa		31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701	FMR1	Q06787	632 aa	Known RBP eCLIP	31.28	■■■□□ 2.6	9e-16	■□□□□ 8.3
SRRM2-223	ENST00000575701	ZBED3	Q96IU2	234 aa	Predicted RBP	31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701	ZBTB40	Q9NUA8	1239 aa		31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701	NOP58	Q9Y2X3	529 aa	Known RBP	31.28	■■■□□ 2.6
SRRM2-223	ENST00000575701	CELF2	O95319	508 aa	Known RBP	31.27	■■■□□ 2.6
SRRM2-223	ENST00000575701	OS9	Q13438	667 aa	Predicted RBP	31.27	■■■□□ 2.6
SRRM2-223	ENST00000575701	CST9	Q5W186	159 aa		31.27	■■■□□ 2.6
SRRM2-223	ENST00000575701	SUGT1	Q9Y2Z0	365 aa		31.27	■■■□□ 2.6
SRRM2-223	ENST00000575701	CNTNAP1	P78357	1384 aa		31.27	■■■□□ 2.6
SRRM2-223	ENST00000575701	ECM29	Q5VYK3	1845 aa		31.26	■■■□□ 2.6
SRRM2-223	ENST00000575701	ADM5	C9JUS6	153 aa		31.26	■■■□□ 2.59
SRRM2-223	ENST00000575701	SURF6	O75683	361 aa	Known RBP	31.26	■■■□□ 2.59
SRRM2-223	ENST00000575701	WDR66	Q8TBY9	1149 aa		31.26	■■■□□ 2.59
SRRM2-223	ENST00000575701	ABT1	Q9ULW3	272 aa	Known RBP	31.26	■■■□□ 2.59
SRRM2-223	ENST00000575701	TTF2	Q9UNY4	1162 aa	Known RBP	31.26	■■■□□ 2.59
SRRM2-223	ENST00000575701	TIMM10	P62072	90 aa		31.25	■■■□□ 2.59
SRRM2-223	ENST00000575701	CFAP100	Q494V2	611 aa		31.25	■■■□□ 2.59
SRRM2-223	ENST00000575701	RPAP2	Q8IXW5	612 aa	Predicted RBP	31.25	■■■□□ 2.59
SRRM2-223	ENST00000575701	SERPINA10	Q9UK55	444 aa		31.25	■■■□□ 2.59
SRRM2-223	ENST00000575701	RASSF10	A6NK89	507 aa		31.24	■■■□□ 2.59
SRRM2-223	ENST00000575701	C20orf194	Q5TEA3	1177 aa		31.24	■■■□□ 2.59
SRRM2-223	ENST00000575701	CCDC102B	Q68D86	513 aa		31.24	■■■□□ 2.59
SRRM2-223	ENST00000575701	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.24	■■■□□ 2.59
SRRM2-223	ENST00000575701	GPR108	Q9NPR9	543 aa		31.24	■■■□□ 2.59
SRRM2-223	ENST00000575701	DENND2A	Q9ULE3	1009 aa		31.24	■■■□□ 2.59
SRRM2-223	ENST00000575701	MAST3	O60307	1309 aa		31.24	■■■□□ 2.59
SRRM2-223	ENST00000575701	MYO1B	O43795	1136 aa		31.23	■■■□□ 2.59
SRRM2-223	ENST00000575701	ADORA1	P30542	326 aa		31.23	■■■□□ 2.59
SRRM2-223	ENST00000575701	PHKA1	P46020	1223 aa		31.23	■■■□□ 2.59
SRRM2-223	ENST00000575701	XAGE2	Q96GT9	111 aa		31.23	■■■□□ 2.59
SRRM2-223	ENST00000575701	ZNF408	Q9H9D4	720 aa		31.23	■■■□□ 2.59
SRRM2-223	ENST00000575701	COL1A1	P02452	1464 aa	Predicted RBP	31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	SPDYE2B	A6NHP3	402 aa		31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	HMMR	O75330	724 aa		31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	SPDYE6	P0CI01	402 aa		31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	HDLBP	Q00341	1268 aa	Known RBP	31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	JMY	Q8N9B5	988 aa		31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	NEUROD6	Q96NK8	337 aa		31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	MKRN1	Q9UHC7	482 aa	Known RBP	31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	TLL2	Q9Y6L7	1015 aa		31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	PDS5A	Q29RF7	1337 aa	Known RBP	31.22	■■■□□ 2.59
SRRM2-223	ENST00000575701	RBM5	P52756	815 aa	Known RBP eCLIP	31.21	■■■□□ 2.59
SRRM2-223	ENST00000575701	DEFB115	Q30KQ5	88 aa		31.2	■■■□□ 2.59
SRRM2-223	ENST00000575701	HSP90AB4P	Q58FF6	505 aa		31.2	■■■□□ 2.59
SRRM2-223	ENST00000575701	CDCA5	Q96FF9	252 aa		31.2	■■■□□ 2.59
SRRM2-223	ENST00000575701	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	31.2	■■■□□ 2.59
SRRM2-223	ENST00000575701	SALL1	Q9NSC2	1324 aa		31.2	■■■□□ 2.58
SRRM2-223	ENST00000575701	GORAB	Q5T7V8	394 aa		31.19	■■■□□ 2.58
SRRM2-223	ENST00000575701	ERC1	Q8IUD2	1116 aa		31.19	■■■□□ 2.58
SRRM2-223	ENST00000575701	MRI	Q9BWK5	157 aa		31.19	■■■□□ 2.58
SRRM2-223	ENST00000575701	CRK	P46108	304 aa		31.18	■■■□□ 2.58
SRRM2-223	ENST00000575701	RRP1	P56182	461 aa	Known RBP	31.18	■■■□□ 2.58
SRRM2-223	ENST00000575701	TNNI3K	Q59H18	835 aa		31.18	■■■□□ 2.58
SRRM2-223	ENST00000575701	SAPCD2	Q86UD0	394 aa		31.18	■■■□□ 2.58
SRRM2-223	ENST00000575701	HHIPL1	Q96JK4	782 aa		31.18	■■■□□ 2.58
SRRM2-223	ENST00000575701	FPGT-TNNI3K	V9GXZ4	949 aa		31.18	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms