RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	CST9	Q5W186	159 aa		32.56	■■■□□ 2.8
SRRM2-222	ENST00000575009	YTHDC1	Q96MU7	727 aa	Known RBP	32.56	■■■□□ 2.8
SRRM2-222	ENST00000575009	ARAP2	Q8WZ64	1704 aa		32.56	■■■□□ 2.8
SRRM2-222	ENST00000575009		F8W031	263 aa	Predicted RBP	32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	IFIT1	P09914	478 aa	Known RBP	32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	IL15	P40933	162 aa	Predicted RBP	32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	NBPF9	Q3BBW0	867 aa		32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	ANGEL2	Q5VTE6	544 aa	Known RBP	32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	KRT26	Q7Z3Y9	468 aa		32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	VPS37D	Q86XT2	251 aa		32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	OGFOD1	Q8N543	542 aa		32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	DCPS	Q96C86	337 aa	Known RBP	32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	CEP126	Q9P2H0	1117 aa		32.55	■■■□□ 2.8
SRRM2-222	ENST00000575009	FAM205A	Q6ZU69	1335 aa		32.54	■■■□□ 2.8
SRRM2-222	ENST00000575009	SLC5A1	P13866	664 aa		32.54	■■■□□ 2.8
SRRM2-222	ENST00000575009	CAVIN4	Q5BKX8	364 aa		32.54	■■■□□ 2.8
SRRM2-222	ENST00000575009	MYH13	Q9UKX3	1938 aa		32.53	■■■□□ 2.8
SRRM2-222	ENST00000575009	ATP2B3	Q16720	1220 aa		32.53	■■■□□ 2.8
SRRM2-222	ENST00000575009	LPIN2	Q92539	896 aa		32.53	■■■□□ 2.8
SRRM2-222	ENST00000575009	ZNF408	Q9H9D4	720 aa		32.53	■■■□□ 2.8
SRRM2-222	ENST00000575009	SCAF8	Q9UPN6	1271 aa	Known RBP	32.53	■■■□□ 2.8
SRRM2-222	ENST00000575009	CHAF1A	Q13111	956 aa	Predicted RBP	32.52	■■■□□ 2.8
SRRM2-222	ENST00000575009	CELF2	O95319	508 aa	Known RBP	32.51	■■■□□ 2.79
SRRM2-222	ENST00000575009	FKBP1A	P62942	108 aa	Known RBP	32.51	■■■□□ 2.79
SRRM2-222	ENST00000575009	HDAC9	Q9UKV0	1011 aa		32.51	■■■□□ 2.79
SRRM2-222	ENST00000575009	PCDHAC2	Q9Y5I4	1007 aa		32.51	■■■□□ 2.79
SRRM2-222	ENST00000575009	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	32.51	■■■□□ 2.79
SRRM2-222	ENST00000575009	CNTNAP1	P78357	1384 aa		32.5	■■■□□ 2.79
SRRM2-222	ENST00000575009	WNT10B	O00744	389 aa		32.5	■■■□□ 2.79
SRRM2-222	ENST00000575009	MFSD14B	Q5SR56	506 aa		32.5	■■■□□ 2.79
SRRM2-222	ENST00000575009	ABT1	Q9ULW3	272 aa	Known RBP	32.5	■■■□□ 2.79
SRRM2-222	ENST00000575009	FRAT2	O75474	233 aa	Predicted RBP	32.48	■■■□□ 2.79
SRRM2-222	ENST00000575009	TFCP2	Q12800	502 aa		32.48	■■■□□ 2.79
SRRM2-222	ENST00000575009	GRIK5	Q16478	980 aa		32.48	■■■□□ 2.79
SRRM2-222	ENST00000575009	SULF1	Q8IWU6	871 aa		32.48	■■■□□ 2.79
SRRM2-222	ENST00000575009	ADORA1	P30542	326 aa		32.47	■■■□□ 2.79
SRRM2-222	ENST00000575009	ATP8B2	P98198	1209 aa		32.47	■■■□□ 2.79
SRRM2-222	ENST00000575009	POLA2	Q14181	598 aa		32.47	■■■□□ 2.79
SRRM2-222	ENST00000575009	ZBED3	Q96IU2	234 aa	Predicted RBP	32.47	■■■□□ 2.79
SRRM2-222	ENST00000575009	COG6	Q9Y2V7	657 aa		32.47	■■■□□ 2.79
SRRM2-222	ENST00000575009	COL1A1	P02452	1464 aa	Predicted RBP	32.47	■■■□□ 2.79
SRRM2-222	ENST00000575009	MS4A1	P11836	297 aa		32.46	■■■□□ 2.79
SRRM2-222	ENST00000575009	JMY	Q8N9B5	988 aa		32.46	■■■□□ 2.79
SRRM2-222	ENST00000575009	ECM29	Q5VYK3	1845 aa		32.46	■■■□□ 2.79
SRRM2-222	ENST00000575009	C20orf194	Q5TEA3	1177 aa		32.45	■■■□□ 2.79
SRRM2-222	ENST00000575009	SSH3	Q8TE77	659 aa		32.45	■■■□□ 2.79
SRRM2-222	ENST00000575009	RASSF10	A6NK89	507 aa		32.44	■■■□□ 2.78
SRRM2-222	ENST00000575009	MMP14	P50281	582 aa		32.44	■■■□□ 2.78
SRRM2-222	ENST00000575009	TIMM10	P62072	90 aa		32.44	■■■□□ 2.78
SRRM2-222	ENST00000575009	MVP	Q14764	893 aa	Known RBP	32.44	■■■□□ 2.78
SRRM2-222	ENST00000575009	AOX1	Q06278	1338 aa		32.44	■■■□□ 2.78
SRRM2-222	ENST00000575009	PITPNM2	Q9BZ72	1349 aa		32.44	■■■□□ 2.78
SRRM2-222	ENST00000575009	VEGFB	P49765	207 aa		32.43	■■■□□ 2.78
SRRM2-222	ENST00000575009	DLGAP5	Q15398	846 aa		32.43	■■■□□ 2.78
SRRM2-222	ENST00000575009	DEFB115	Q30KQ5	88 aa		32.43	■■■□□ 2.78
SRRM2-222	ENST00000575009	CFAP100	Q494V2	611 aa		32.43	■■■□□ 2.78
SRRM2-222	ENST00000575009	CDCA5	Q96FF9	252 aa		32.43	■■■□□ 2.78
SRRM2-222	ENST00000575009	TTF2	Q9UNY4	1162 aa	Known RBP	32.43	■■■□□ 2.78
SRRM2-222	ENST00000575009	TLL2	Q9Y6L7	1015 aa		32.43	■■■□□ 2.78
SRRM2-222	ENST00000575009	PHKA1	P46020	1223 aa		32.42	■■■□□ 2.78
SRRM2-222	ENST00000575009	G3BP1	Q13283	466 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
SRRM2-222	ENST00000575009		A0A1B0GUL7	405 aa		32.41	■■■□□ 2.78
SRRM2-222	ENST00000575009	CEP85	Q6P2H3	762 aa		32.41	■■■□□ 2.78
SRRM2-222	ENST00000575009	PRAMEF18	Q5VWM3	479 aa		32.4	■■■□□ 2.78
SRRM2-222	ENST00000575009	MTMR14	Q8NCE2	650 aa		32.4	■■■□□ 2.78
SRRM2-222	ENST00000575009	RBM5	P52756	815 aa	Known RBP eCLIP	32.39	■■■□□ 2.78	4e-18	■■■□□ 15.7
SRRM2-222	ENST00000575009	SAPCD2	Q86UD0	394 aa		32.39	■■■□□ 2.78
SRRM2-222	ENST00000575009	PRMT6	Q96LA8	375 aa	Predicted RBP	32.39	■■■□□ 2.78
SRRM2-222	ENST00000575009	SPDYE2B	A6NHP3	402 aa		32.38	■■■□□ 2.77
SRRM2-222	ENST00000575009	SPDYE6	P0CI01	402 aa		32.38	■■■□□ 2.77
SRRM2-222	ENST00000575009	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.38	■■■□□ 2.77
SRRM2-222	ENST00000575009	TBC1D22A	Q8WUA7	517 aa		32.38	■■■□□ 2.77
SRRM2-222	ENST00000575009	XAGE2	Q96GT9	111 aa		32.38	■■■□□ 2.77
SRRM2-222	ENST00000575009	DDX19B	Q9UMR2	479 aa		32.38	■■■□□ 2.77
SRRM2-222	ENST00000575009	AKAP2	Q9Y2D5	859 aa		32.38	■■■□□ 2.77
SRRM2-222	ENST00000575009	CLRN2	A0PK11	232 aa		32.37	■■■□□ 2.77
SRRM2-222	ENST00000575009	SURF6	O75683	361 aa	Known RBP	32.37	■■■□□ 2.77
SRRM2-222	ENST00000575009	CCDC102B	Q68D86	513 aa		32.37	■■■□□ 2.77
SRRM2-222	ENST00000575009	CYP4F22	Q6NT55	531 aa		32.37	■■■□□ 2.77
SRRM2-222	ENST00000575009	NEUROD6	Q96NK8	337 aa		32.37	■■■□□ 2.77
SRRM2-222	ENST00000575009	GBA2	Q9HCG7	927 aa	Predicted RBP	32.37	■■■□□ 2.77
SRRM2-222	ENST00000575009	GRM1	Q13255	1194 aa		32.36	■■■□□ 2.77
SRRM2-222	ENST00000575009	OS9	Q13438	667 aa	Predicted RBP	32.35	■■■□□ 2.77
SRRM2-222	ENST00000575009	GNL3L	Q9NVN8	582 aa	Known RBP	32.35	■■■□□ 2.77
SRRM2-222	ENST00000575009	CRK	P46108	304 aa		32.34	■■■□□ 2.77
SRRM2-222	ENST00000575009	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.34	■■■□□ 2.77
SRRM2-222	ENST00000575009	ZBTB40	Q9NUA8	1239 aa		32.34	■■■□□ 2.77
SRRM2-222	ENST00000575009	SERPINA10	Q9UK55	444 aa		32.34	■■■□□ 2.77
SRRM2-222	ENST00000575009	WDR33	Q9C0J8	1336 aa	Known RBP	32.33	■■■□□ 2.77
SRRM2-222	ENST00000575009	APOBEC3F	Q8IUX4	373 aa	Known RBP	32.33	■■■□□ 2.77
SRRM2-222	ENST00000575009	CAPNS2	Q96L46	248 aa		32.33	■■■□□ 2.77
SRRM2-222	ENST00000575009	HUNK	P57058	714 aa		32.32	■■■□□ 2.76
SRRM2-222	ENST00000575009	PDE3A	Q14432	1141 aa		32.32	■■■□□ 2.76
SRRM2-222	ENST00000575009	C2orf69	Q8N8R5	385 aa		32.32	■■■□□ 2.76
SRRM2-222	ENST00000575009	WDR66	Q8TBY9	1149 aa		32.32	■■■□□ 2.76
SRRM2-222	ENST00000575009	NOP58	Q9Y2X3	529 aa	Known RBP	32.32	■■■□□ 2.76
SRRM2-222	ENST00000575009	RASGRF1	Q13972	1273 aa		32.31	■■■□□ 2.76
SRRM2-222	ENST00000575009	VEZT	Q9HBM0	779 aa		32.31	■■■□□ 2.76
SRRM2-222	ENST00000575009	DENND2A	Q9ULE3	1009 aa		32.31	■■■□□ 2.76
SRRM2-222	ENST00000575009	PCNT	O95613	3336 aa		32.31	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms