RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ADAMTS8Q9UP79 889 aa15.3■□□□□ 0.04
CTNS-208ENST00000574218 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 CRHR2Q13324 411 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 UBE3BQ7Z3V4 1068 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 NBPF11Q86T75 865 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 ARMC5Q96C12 935 aa15.29■□□□□ 0.04
CTNS-208ENST00000574218 ZBED3Q96IU2 234 aaPredicted RBP15.29■□□□□ 0.04
CTNS-208ENST00000574218 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 F8W031 263 aaPredicted RBP15.28■□□□□ 0.04
CTNS-208ENST00000574218 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
CTNS-208ENST00000574218 WDHD1O75717 1129 aaPredicted RBP15.28■□□□□ 0.04
CTNS-208ENST00000574218 IGKV5-2P06315 115 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 EN2P19622 333 aaPredicted RBP15.28■□□□□ 0.04
CTNS-208ENST00000574218 ITGA6P23229 1130 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 RBM5P52756 815 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTNS-208ENST00000574218 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 ANKRD13AQ8IZ07 590 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 MTMR14Q8NCE2 650 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 SSC5DA1L4H1 1573 aa15.28■□□□□ 0.04
CTNS-208ENST00000574218 KLRK1P26718 216 aa15.27■□□□□ 0.04
CTNS-208ENST00000574218 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.04
CTNS-208ENST00000574218 CFAP100Q494V2 611 aa15.27■□□□□ 0.04
CTNS-208ENST00000574218 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.04
CTNS-208ENST00000574218 ZNF804AQ7Z570 1209 aa15.27■□□□□ 0.04
CTNS-208ENST00000574218 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.04
CTNS-208ENST00000574218 CEP290O15078 2479 aa15.26■□□□□ 0.03
CTNS-208ENST00000574218 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
CTNS-208ENST00000574218 CHRNDQ07001 517 aa15.26■□□□□ 0.03
CTNS-208ENST00000574218 TNFAIP1Q13829 316 aa15.26■□□□□ 0.03
CTNS-208ENST00000574218 MYH16Q9H6N6 1097 aa15.26■□□□□ 0.03
CTNS-208ENST00000574218 CENPFP49454 3210 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 HTTP42858 3142 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 APAF1O14727 1248 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTNS-208ENST00000574218 NBPF12Q5TAG4 269 aaPredicted RBP15.25■□□□□ 0.03
CTNS-208ENST00000574218 ELP3Q9H9T3 547 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 ZFYVE28Q9HCC9 887 aa15.25■□□□□ 0.03
CTNS-208ENST00000574218 MKI67P46013 3256 aaKnown RBP15.24■□□□□ 0.03
CTNS-208ENST00000574218 ARAP2Q8WZ64 1704 aa15.24■□□□□ 0.03
CTNS-208ENST00000574218 H7C1W4 665 aa15.24■□□□□ 0.03
CTNS-208ENST00000574218 RASA3Q14644 834 aa15.24■□□□□ 0.03
CTNS-208ENST00000574218 TAF1CQ15572 869 aaPredicted RBP15.24■□□□□ 0.03
CTNS-208ENST00000574218 OPTNQ96CV9 577 aa15.24■□□□□ 0.03
CTNS-208ENST00000574218 PLA2G12BQ9BX93 195 aa15.24■□□□□ 0.03
CTNS-208ENST00000574218 CHMP3Q9Y3E7 222 aa15.24■□□□□ 0.03
CTNS-208ENST00000574218 TESPA1A2RU30 521 aaPredicted RBP15.23■□□□□ 0.03
CTNS-208ENST00000574218 USP2O75604 605 aaPredicted RBP15.23■□□□□ 0.03
CTNS-208ENST00000574218 FKBP1AP62942 108 aaKnown RBP15.23■□□□□ 0.03
CTNS-208ENST00000574218 KIF22Q14807 665 aa15.23■□□□□ 0.03
CTNS-208ENST00000574218 CERS5Q8N5B7 392 aa15.23■□□□□ 0.03
CTNS-208ENST00000574218 ZNF333Q96JL9 665 aa15.23■□□□□ 0.03
CTNS-208ENST00000574218 PRMT6Q96LA8 375 aaPredicted RBP15.23■□□□□ 0.03
CTNS-208ENST00000574218 CCL15-CCL14A0A0B4J2E2 113 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 TAF5LO75529 589 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 GJA5P36382 358 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 GTF2A2P52657 109 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 GCKRQ14397 625 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 CCL15Q16663 113 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 TAF7LQ5H9L4 462 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
CTNS-208ENST00000574218 PCDHAC2Q9Y5I4 1007 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 CSADQ9Y600 493 aa15.22■□□□□ 0.03
CTNS-208ENST00000574218 TRIOBPQ9H2D6 2365 aa15.21■□□□□ 0.03
CTNS-208ENST00000574218 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
CTNS-208ENST00000574218 IL1R1P14778 569 aa15.21■□□□□ 0.03
CTNS-208ENST00000574218 TNNI2P48788 182 aa15.21■□□□□ 0.03
CTNS-208ENST00000574218 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.03
CTNS-208ENST00000574218 IFIT5Q13325 482 aaKnown RBP15.21■□□□□ 0.03
CTNS-208ENST00000574218 C15orf52Q6ZUT6 534 aaKnown RBP15.21■□□□□ 0.03
CTNS-208ENST00000574218 HELBQ8NG08 1087 aaPredicted RBP15.21■□□□□ 0.03
CTNS-208ENST00000574218 PTPN18Q99952 460 aa15.21■□□□□ 0.03
CTNS-208ENST00000574218 JAG2Q9Y219 1238 aa15.21■□□□□ 0.03
CTNS-208ENST00000574218 PTCH2Q9Y6C5 1203 aa15.21■□□□□ 0.03
CTNS-208ENST00000574218 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
CTNS-208ENST00000574218 CSF1RP07333 972 aa15.2■□□□□ 0.02
CTNS-208ENST00000574218 TSPYL6Q8N831 410 aa15.2■□□□□ 0.02
CTNS-208ENST00000574218 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
CTNS-208ENST00000574218 PLIN1O60240 522 aa15.19■□□□□ 0.02
CTNS-208ENST00000574218 FKBP5Q13451 457 aaPredicted RBP15.19■□□□□ 0.02
CTNS-208ENST00000574218 TWISTNBQ3B726 338 aaPredicted RBP15.19■□□□□ 0.02
CTNS-208ENST00000574218 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
CTNS-208ENST00000574218 ZNF70Q9UC06 446 aaPredicted RBP15.19■□□□□ 0.02
CTNS-208ENST00000574218 ZSWIM8A7E2V4 1837 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 SNAP23O00161 211 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 KCNA4P22459 653 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 MAP3K9P80192 1104 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 G2E3Q7L622 706 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 LINS1Q8NG48 757 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 DNAAF4Q8WXU2 420 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 BRI3BPQ8WY22 251 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 TSR2Q969E8 191 aaKnown RBP15.18■□□□□ 0.02
CTNS-208ENST00000574218 OTUD5Q96G74 571 aa15.18■□□□□ 0.02
CTNS-208ENST00000574218 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms