RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
NDE1-210ENST00000574163 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
NDE1-210ENST00000574163 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
NDE1-210ENST00000574163 FBXO33Q7Z6M2 555 aa12.13□□□□□ -0.47
NDE1-210ENST00000574163 TDRD7Q8NHU6 1098 aaKnown RBP12.13□□□□□ -0.47
NDE1-210ENST00000574163 FAM84BQ96KN1 310 aaPredicted RBP12.13□□□□□ -0.47
NDE1-210ENST00000574163 YTHDC1Q96MU7 727 aaKnown RBP12.13□□□□□ -0.47
NDE1-210ENST00000574163 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 SASH1O94885 1247 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 GYG1P46976 350 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 GTF2IP78347 998 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 ATP8B2P98198 1209 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
NDE1-210ENST00000574163 PITPNM2Q9BZ72 1349 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
NDE1-210ENST00000574163 TBC1D10BQ4KMP7 808 aaPredicted RBP12.11□□□□□ -0.47
NDE1-210ENST00000574163 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 TBC1D22AQ8WUA7 517 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 AKAP2Q9Y2D5 859 aa12.11□□□□□ -0.47
NDE1-210ENST00000574163 NOP58Q9Y2X3 529 aaKnown RBP12.11□□□□□ -0.47
NDE1-210ENST00000574163 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
NDE1-210ENST00000574163 COL1A1P02452 1464 aaPredicted RBP12.1□□□□□ -0.47
NDE1-210ENST00000574163 SEMA3EO15041 775 aa12.1□□□□□ -0.47
NDE1-210ENST00000574163 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
NDE1-210ENST00000574163 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
NDE1-210ENST00000574163 MAP1SQ66K74 1059 aaPredicted RBP12.1□□□□□ -0.47
NDE1-210ENST00000574163 SAMD7Q7Z3H4 446 aa12.1□□□□□ -0.47
NDE1-210ENST00000574163 CERS5Q8N5B7 392 aa12.1□□□□□ -0.47
NDE1-210ENST00000574163 MYOZ2Q9NPC6 264 aa12.1□□□□□ -0.47
NDE1-210ENST00000574163 GPR108Q9NPR9 543 aa12.1□□□□□ -0.47
NDE1-210ENST00000574163 PDS5AQ29RF7 1337 aaKnown RBP12.1□□□□□ -0.47
NDE1-210ENST00000574163 HMMRO75330 724 aa12.09□□□□□ -0.47
NDE1-210ENST00000574163 EGFRP00533 1210 aa12.09□□□□□ -0.47
NDE1-210ENST00000574163 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
NDE1-210ENST00000574163 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
NDE1-210ENST00000574163 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
NDE1-210ENST00000574163 MTMR14Q8NCE2 650 aa12.09□□□□□ -0.47
NDE1-210ENST00000574163 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
NDE1-210ENST00000574163 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
NDE1-210ENST00000574163 SUGT1Q9Y2Z0 365 aa12.09□□□□□ -0.47
NDE1-210ENST00000574163 A0A1B0GUL7 405 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 BCAMP50895 628 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 TFCP2Q12800 502 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 HSP90AB4PQ58FF6 505 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 C20orf194Q5TEA3 1177 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 KIAA0825Q8IV33 1275 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
NDE1-210ENST00000574163 MXD3Q9BW11 206 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 GGA3Q9NZ52 723 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 MAST3O60307 1309 aa12.08□□□□□ -0.48
NDE1-210ENST00000574163 MAST2Q6P0Q8 1798 aa12.07□□□□□ -0.48
NDE1-210ENST00000574163 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
NDE1-210ENST00000574163 OS9Q13438 667 aaPredicted RBP12.07□□□□□ -0.48
NDE1-210ENST00000574163 KRT26Q7Z3Y9 468 aa12.07□□□□□ -0.48
NDE1-210ENST00000574163 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
NDE1-210ENST00000574163 DCPSQ96C86 337 aaKnown RBP12.07□□□□□ -0.48
NDE1-210ENST00000574163 THSD7BQ9C0I4 1608 aa12.07□□□□□ -0.48
NDE1-210ENST00000574163 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
NDE1-210ENST00000574163 PAPPA2Q9BXP8 1791 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 TMEM88BA6NKF7 163 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 WNT10BO00744 389 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
NDE1-210ENST00000574163 PHKA1P46020 1223 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 HDLBPQ00341 1268 aaKnown RBP12.06□□□□□ -0.48
NDE1-210ENST00000574163 CCDC102BQ68D86 513 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 SULF1Q8IWU6 871 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 GLIS2Q9BZE0 524 aaPredicted RBP12.06□□□□□ -0.48
NDE1-210ENST00000574163 SERPINA10Q9UK55 444 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 DENND2AQ9ULE3 1009 aa12.06□□□□□ -0.48
NDE1-210ENST00000574163 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 ADORA1P30542 326 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
NDE1-210ENST00000574163 SCARF1Q14162 830 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 DLGAP5Q15398 846 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 TNNI3KQ59H18 835 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 RBM26Q5T8P6 1007 aaKnown RBP12.05□□□□□ -0.48
NDE1-210ENST00000574163 APOBEC3FQ8IUX4 373 aaKnown RBP12.05□□□□□ -0.48
NDE1-210ENST00000574163 XAGE2Q96GT9 111 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
NDE1-210ENST00000574163 JAG2Q9Y219 1238 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 FPGT-TNNI3KV9GXZ4 949 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 AKAP11Q9UKA4 1901 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 CNTNAP1P78357 1384 aa12.05□□□□□ -0.48
NDE1-210ENST00000574163 TRAF5O00463 557 aa12.04□□□□□ -0.48
NDE1-210ENST00000574163 ARID4AP29374 1257 aaPredicted RBP12.04□□□□□ -0.48
NDE1-210ENST00000574163 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
NDE1-210ENST00000574163 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
NDE1-210ENST00000574163 ANGEL2Q5VTE6 544 aaKnown RBP12.04□□□□□ -0.48
NDE1-210ENST00000574163 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms