RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SUPT16HQ9Y5B9 1047 aaKnown RBP13.64□□□□□ -0.23
CHD3-216ENST00000573936 PSMD14O00487 310 aa13.63□□□□□ -0.23
CHD3-216ENST00000573936 IL1R1P14778 569 aa13.63□□□□□ -0.23
CHD3-216ENST00000573936 KLRK1P26718 216 aa13.63□□□□□ -0.23
CHD3-216ENST00000573936 ATP2B3Q16720 1220 aa13.63□□□□□ -0.23
CHD3-216ENST00000573936 DPF2Q92785 391 aa13.63□□□□□ -0.23
CHD3-216ENST00000573936 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
CHD3-216ENST00000573936 FMR1Q06787 632 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHD3-216ENST00000573936 TFCP2Q12800 502 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 STRIP1Q5VSL9 837 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 FAM84BQ96KN1 310 aaPredicted RBP13.62□□□□□ -0.23
CHD3-216ENST00000573936 CAPNS2Q96L46 248 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 CRBNQ96SW2 442 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 KCNQ5Q9NR82 932 aa13.62□□□□□ -0.23
CHD3-216ENST00000573936 GYG1P46976 350 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 GMPSP49915 693 aaPredicted RBP13.61□□□□□ -0.23
CHD3-216ENST00000573936 MMP14P50281 582 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 RSBN1LQ6PCB5 846 aaPredicted RBP13.61□□□□□ -0.23
CHD3-216ENST00000573936 USP50Q70EL3 339 aaPredicted RBP13.61□□□□□ -0.23
CHD3-216ENST00000573936 AGBL3Q8NEM8 1001 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 FBXW7Q969H0 707 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 MYO3BQ8WXR4 1341 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 THSD7BQ9C0I4 1608 aa13.61□□□□□ -0.23
CHD3-216ENST00000573936 A0A1B0GUL6 1792 aa13.6□□□□□ -0.23
CHD3-216ENST00000573936 H7C1D1 291 aa13.6□□□□□ -0.23
CHD3-216ENST00000573936 TRAF5O00463 557 aa13.6□□□□□ -0.23
CHD3-216ENST00000573936 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
CHD3-216ENST00000573936 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
CHD3-216ENST00000573936 SASH1O94885 1247 aa13.6□□□□□ -0.23
CHD3-216ENST00000573936 FKBP1AP62942 108 aaKnown RBP13.6□□□□□ -0.23
CHD3-216ENST00000573936 GTF2IP78347 998 aa13.6□□□□□ -0.23
CHD3-216ENST00000573936 TDRD7Q8NHU6 1098 aaKnown RBP13.6□□□□□ -0.23
CHD3-216ENST00000573936 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
CHD3-216ENST00000573936 GPRC5DQ9NZD1 345 aa13.6□□□□□ -0.23
CHD3-216ENST00000573936 BCAMP50895 628 aa13.59□□□□□ -0.23
CHD3-216ENST00000573936 CYP4F22Q6NT55 531 aa13.59□□□□□ -0.23
CHD3-216ENST00000573936 SIRT2Q8IXJ6 389 aa13.59□□□□□ -0.23
CHD3-216ENST00000573936 NEUROD6Q96NK8 337 aa13.59□□□□□ -0.23
CHD3-216ENST00000573936 ADARB2Q9NS39 739 aaKnown RBP13.59□□□□□ -0.23
CHD3-216ENST00000573936 CNOT7Q9UIV1 285 aaKnown RBP13.59□□□□□ -0.23
CHD3-216ENST00000573936 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
CHD3-216ENST00000573936 ZNF609O15014 1411 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 A0A1B0GUL7 405 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 ZBTB22O15209 634 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 MAP2K2P36507 400 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 TIMM10P62072 90 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 DACT2Q5SW24 774 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 EXOC6BQ9Y2D4 811 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 FAM205AQ6ZU69 1335 aa13.58□□□□□ -0.24
CHD3-216ENST00000573936 SEMA3EO15041 775 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 GORABQ5T7V8 394 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 MICALL2Q8IY33 904 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 TBC1D22AQ8WUA7 517 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 KIF1BPQ96EK5 621 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 XAGE2Q96GT9 111 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 GMLQ99445 158 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 HDAC9Q9UKV0 1011 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
CHD3-216ENST00000573936 CA12O43570 354 aa13.56□□□□□ -0.24
CHD3-216ENST00000573936 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
CHD3-216ENST00000573936 CST9Q5W186 159 aa13.56□□□□□ -0.24
CHD3-216ENST00000573936 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
CHD3-216ENST00000573936 DENND2AQ9ULE3 1009 aa13.56□□□□□ -0.24
CHD3-216ENST00000573936 TLL2Q9Y6L7 1015 aa13.56□□□□□ -0.24
CHD3-216ENST00000573936 SHTN1A0MZ66 631 aa13.55□□□□□ -0.24
CHD3-216ENST00000573936 ZNF280AP59817 542 aaPredicted RBP13.55□□□□□ -0.24
CHD3-216ENST00000573936 CCDC158Q5M9N0 1113 aa13.55□□□□□ -0.24
CHD3-216ENST00000573936 CCDC102BQ68D86 513 aa13.55□□□□□ -0.24
CHD3-216ENST00000573936 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
CHD3-216ENST00000573936 WDR66Q8TBY9 1149 aa13.55□□□□□ -0.24
CHD3-216ENST00000573936 TRPM4Q8TD43 1214 aa13.55□□□□□ -0.24
CHD3-216ENST00000573936 TSKSQ9UJT2 592 aa13.55□□□□□ -0.24
CHD3-216ENST00000573936 PCDHB15Q9Y5E8 787 aa13.55□□□□□ -0.24
CHD3-216ENST00000573936 AOC2O75106 756 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 CELF2O95319 508 aaKnown RBP13.54□□□□□ -0.24
CHD3-216ENST00000573936 UQCRFS1P1P0C7P4 283 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 ADORA1P30542 326 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 PHKA1P46020 1223 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
CHD3-216ENST00000573936 MFSD14BQ5SR56 506 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 EXOC6Q8TAG9 804 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
CHD3-216ENST00000573936 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 GLIS2Q9BZE0 524 aaPredicted RBP13.54□□□□□ -0.24
CHD3-216ENST00000573936 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 ZNF408Q9H9D4 720 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
CHD3-216ENST00000573936 SUGT1Q9Y2Z0 365 aa13.54□□□□□ -0.24
CHD3-216ENST00000573936 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
CHD3-216ENST00000573936 PSME4Q14997 1843 aa13.53□□□□□ -0.24
CHD3-216ENST00000573936 SCN9AQ15858 1988 aa13.53□□□□□ -0.24
CHD3-216ENST00000573936 KIF4BQ2VIQ3 1234 aa13.53□□□□□ -0.24
CHD3-216ENST00000573936 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms