RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PSME4Q14997 1843 aa21.24■□□□□ 0.99
LITAF-212ENST00000573332 H7C1D1 291 aa21.23■□□□□ 0.99
LITAF-212ENST00000573332 FRAT2O75474 233 aaPredicted RBP21.23■□□□□ 0.99
LITAF-212ENST00000573332 PNMA8AQ86V59 439 aaPredicted RBP21.23■□□□□ 0.99
LITAF-212ENST00000573332 CLASRPQ8N2M8 674 aaKnown RBP21.23■□□□□ 0.99
LITAF-212ENST00000573332 FBXW7Q969H0 707 aa21.23■□□□□ 0.99
LITAF-212ENST00000573332 ADARB2Q9NS39 739 aaKnown RBP21.23■□□□□ 0.99
LITAF-212ENST00000573332 ARAP2Q8WZ64 1704 aa21.23■□□□□ 0.99
LITAF-212ENST00000573332 ZNF280AP59817 542 aaPredicted RBP21.22■□□□□ 0.99
LITAF-212ENST00000573332 IRX6P78412 446 aaPredicted RBP21.22■□□□□ 0.99
LITAF-212ENST00000573332 GORABQ5T7V8 394 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 USP50Q70EL3 339 aaPredicted RBP21.22■□□□□ 0.99
LITAF-212ENST00000573332 MICALL2Q8IY33 904 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 CERS5Q8N5B7 392 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 TBC1D22AQ8WUA7 517 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 ZNF512BQ96KM6 892 aaPredicted RBP21.22■□□□□ 0.99
LITAF-212ENST00000573332 DBNDD2Q9BQY9 259 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 MXD3Q9BW11 206 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 DENND2AQ9ULE3 1009 aa21.22■□□□□ 0.99
LITAF-212ENST00000573332 IQSEC3Q9UPP2 1182 aaPredicted RBP21.22■□□□□ 0.99
LITAF-212ENST00000573332 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
LITAF-212ENST00000573332 TOMM70O94826 608 aa21.21■□□□□ 0.99
LITAF-212ENST00000573332 USP17L8P0C7I0 530 aa21.21■□□□□ 0.99
LITAF-212ENST00000573332 ARID4AP29374 1257 aaPredicted RBP21.21■□□□□ 0.99
LITAF-212ENST00000573332 WDR66Q8TBY9 1149 aa21.21■□□□□ 0.99
LITAF-212ENST00000573332 IL1RAPL2Q9NP60 686 aa21.21■□□□□ 0.99
LITAF-212ENST00000573332 DBNLQ9UJU6 430 aaKnown RBP21.21■□□□□ 0.99
LITAF-212ENST00000573332 ZNF646O15015 1829 aaPredicted RBP21.2■□□□□ 0.98
LITAF-212ENST00000573332 UQCRFS1P1P0C7P4 283 aa21.2■□□□□ 0.98
LITAF-212ENST00000573332 CCDC158Q5M9N0 1113 aa21.2■□□□□ 0.98
LITAF-212ENST00000573332 MFSD14BQ5SR56 506 aa21.2■□□□□ 0.98
LITAF-212ENST00000573332 AACSQ86V21 672 aa21.2■□□□□ 0.98
LITAF-212ENST00000573332 C16orf71Q8IYS4 520 aaPredicted RBP21.2■□□□□ 0.98
LITAF-212ENST00000573332 CCDC8Q9H0W5 538 aaPredicted RBP21.2■□□□□ 0.98
LITAF-212ENST00000573332 SUGT1Q9Y2Z0 365 aa21.2■□□□□ 0.98
LITAF-212ENST00000573332 SHTN1A0MZ66 631 aa21.19■□□□□ 0.98
LITAF-212ENST00000573332 APBB1O00213 710 aa21.19■□□□□ 0.98
LITAF-212ENST00000573332 RASGRF1Q13972 1273 aa21.19■□□□□ 0.98
LITAF-212ENST00000573332 OGFOD1Q8N543 542 aa21.19■□□□□ 0.98
LITAF-212ENST00000573332 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
LITAF-212ENST00000573332 RWDD1Q9H446 243 aaPredicted RBP21.19■□□□□ 0.98
LITAF-212ENST00000573332 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
LITAF-212ENST00000573332 SALL1Q9NSC2 1324 aa21.19■□□□□ 0.98
LITAF-212ENST00000573332 CHAF1AQ13111 956 aaPredicted RBP21.18■□□□□ 0.98
LITAF-212ENST00000573332 RBM46Q8TBY0 533 aaKnown RBP21.18■□□□□ 0.98
LITAF-212ENST00000573332 TLR7Q9NYK1 1049 aaKnown RBP21.18■□□□□ 0.98
LITAF-212ENST00000573332 COL1A1P02452 1464 aaPredicted RBP21.18■□□□□ 0.98
LITAF-212ENST00000573332 LDHDQ86WU2 507 aa21.17■□□□□ 0.98
LITAF-212ENST00000573332 KIAA0825Q8IV33 1275 aa21.17■□□□□ 0.98
LITAF-212ENST00000573332 HDAC9Q9UKV0 1011 aa21.17■□□□□ 0.98
LITAF-212ENST00000573332 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
LITAF-212ENST00000573332 HIRAP54198 1017 aaPredicted RBP21.16■□□□□ 0.98
LITAF-212ENST00000573332 TTC39AQ5SRH9 613 aa21.16■□□□□ 0.98
LITAF-212ENST00000573332 SAMD7Q7Z3H4 446 aa21.16■□□□□ 0.98
LITAF-212ENST00000573332 SMC5Q8IY18 1101 aa21.16■□□□□ 0.98
LITAF-212ENST00000573332 TRPM4Q8TD43 1214 aa21.16■□□□□ 0.98
LITAF-212ENST00000573332 ZC3H15Q8WU90 426 aaKnown RBP21.16■□□□□ 0.98
LITAF-212ENST00000573332 MYOZ2Q9NPC6 264 aa21.16■□□□□ 0.98
LITAF-212ENST00000573332 HMG20BQ9P0W2 317 aa21.16■□□□□ 0.98
LITAF-212ENST00000573332 PGAP2Q9UHJ9 254 aa21.16■□□□□ 0.98
LITAF-212ENST00000573332 POTEIP0CG38 1075 aa21.15■□□□□ 0.98
LITAF-212ENST00000573332 POTEJP0CG39 1038 aa21.15■□□□□ 0.98
LITAF-212ENST00000573332 EAPPQ56P03 285 aaPredicted RBP21.15■□□□□ 0.98
LITAF-212ENST00000573332 ZGPATQ8N5A5 531 aaKnown RBP21.15■□□□□ 0.98
LITAF-212ENST00000573332 SPATA5Q8NB90 893 aa21.15■□□□□ 0.98
LITAF-212ENST00000573332 MRIQ9BWK5 157 aa21.15■□□□□ 0.98
LITAF-212ENST00000573332 EGFRP00533 1210 aa21.14■□□□□ 0.97
LITAF-212ENST00000573332 IGHDP01880 384 aa21.14■□□□□ 0.97
LITAF-212ENST00000573332 MCAMP43121 646 aa21.14■□□□□ 0.97
LITAF-212ENST00000573332 HDLBPQ00341 1268 aaKnown RBP21.14■□□□□ 0.97
LITAF-212ENST00000573332 SCARF1Q14162 830 aa21.14■□□□□ 0.97
LITAF-212ENST00000573332 KIF4BQ2VIQ3 1234 aa21.14■□□□□ 0.97
LITAF-212ENST00000573332 TBC1D10BQ4KMP7 808 aaPredicted RBP21.14■□□□□ 0.97
LITAF-212ENST00000573332 MTMR14Q8NCE2 650 aa21.14■□□□□ 0.97
LITAF-212ENST00000573332 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
LITAF-212ENST00000573332 FSTL1Q12841 308 aa21.13■□□□□ 0.97
LITAF-212ENST00000573332 GRIK5Q16478 980 aa21.13■□□□□ 0.97
LITAF-212ENST00000573332 CHADLQ6NUI6 762 aa21.13■□□□□ 0.97
LITAF-212ENST00000573332 SMC1BQ8NDV3 1235 aa21.13■□□□□ 0.97
LITAF-212ENST00000573332 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.13■□□□□ 0.97
LITAF-212ENST00000573332 ZBED3Q96IU2 234 aaPredicted RBP21.13■□□□□ 0.97
LITAF-212ENST00000573332 SERPINA10Q9UK55 444 aa21.13■□□□□ 0.97
LITAF-212ENST00000573332 TTF2Q9UNY4 1162 aaKnown RBP21.13■□□□□ 0.97
LITAF-212ENST00000573332 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
LITAF-212ENST00000573332 MAST3O60307 1309 aa21.12■□□□□ 0.97
LITAF-212ENST00000573332 RBM26Q5T8P6 1007 aaKnown RBP21.12■□□□□ 0.97
LITAF-212ENST00000573332 F8W031 263 aaPredicted RBP21.11■□□□□ 0.97
LITAF-212ENST00000573332 IGSF3O75054 1194 aa21.11■□□□□ 0.97
LITAF-212ENST00000573332 SPTY2D1Q68D10 685 aaPredicted RBP21.11■□□□□ 0.97
LITAF-212ENST00000573332 PI16Q6UXB8 463 aa21.11■□□□□ 0.97
LITAF-212ENST00000573332 CLEC11AQ9Y240 323 aa21.11■□□□□ 0.97
LITAF-212ENST00000573332 WNT10BO00744 389 aa21.1■□□□□ 0.97
LITAF-212ENST00000573332 LDHBP07195 334 aaKnown RBP21.1■□□□□ 0.97
LITAF-212ENST00000573332 PRDX5P30044 214 aa21.1■□□□□ 0.97
LITAF-212ENST00000573332 ANKRD45Q5TZF3 282 aa21.1■□□□□ 0.97
LITAF-212ENST00000573332 ATP5JP18859 108 aa21.09■□□□□ 0.97
LITAF-212ENST00000573332 DLGAP5Q15398 846 aa21.09■□□□□ 0.97
LITAF-212ENST00000573332 CFAP100Q494V2 611 aa21.09■□□□□ 0.97
LITAF-212ENST00000573332 HHIPL2Q6UWX4 724 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms