RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 C1orf127Q8N9H9 656 aa7.04□□□□□ -1.28
ERCC4-204ENST00000573018 USP26Q9BXU7 913 aa7.04□□□□□ -1.28
ERCC4-204ENST00000573018 SALL4Q9UJQ4 1053 aa7.04□□□□□ -1.28
ERCC4-204ENST00000573018 ZNF777Q9ULD5 760 aaPredicted RBP7.04□□□□□ -1.28
ERCC4-204ENST00000573018 ARL4DP49703 201 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 C19orf57Q0VDD7 668 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 NFKBIBQ15653 356 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 NUTM2GQ5VZR2 741 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 PDE12Q6L8Q7 609 aaKnown RBP7.03□□□□□ -1.28
ERCC4-204ENST00000573018 NFXL1Q6ZNB6 911 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 TP53INP2Q8IXH6 220 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 ABTB2Q8N961 1025 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 DZANK1Q9NVP4 752 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 SOX13Q9UN79 622 aa7.03□□□□□ -1.28
ERCC4-204ENST00000573018 MEGF11A6BM72 1044 aa7.02□□□□□ -1.29
ERCC4-204ENST00000573018 CES1P23141 567 aa7.02□□□□□ -1.29
ERCC4-204ENST00000573018 FAM95CA0A1B0GW59 222 aa7.01□□□□□ -1.29
ERCC4-204ENST00000573018 A6NHS1 94 aa7.01□□□□□ -1.29
ERCC4-204ENST00000573018 C8AP07357 584 aa7.01□□□□□ -1.29
ERCC4-204ENST00000573018 DRD2P14416 443 aa7.01□□□□□ -1.29
ERCC4-204ENST00000573018 VSIG10LQ86VR7 867 aa7.01□□□□□ -1.29
ERCC4-204ENST00000573018 TMPRSS13Q9BYE2 586 aa7.01□□□□□ -1.29
ERCC4-204ENST00000573018 SOX1O00570 391 aaPredicted RBP7□□□□□ -1.29
ERCC4-204ENST00000573018 DLGAP3O95886 979 aa7□□□□□ -1.29
ERCC4-204ENST00000573018 ELOAQ14241 798 aaKnown RBP7□□□□□ -1.29
ERCC4-204ENST00000573018 COL19A1Q14993 1142 aa7□□□□□ -1.29
ERCC4-204ENST00000573018 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
ERCC4-204ENST00000573018 PAOXQ6QHF9 649 aa7□□□□□ -1.29
ERCC4-204ENST00000573018 CBLL1Q75N03 491 aa7□□□□□ -1.29
ERCC4-204ENST00000573018 FBLIM1Q8WUP2 373 aa7□□□□□ -1.29
ERCC4-204ENST00000573018 FBXL18Q96ME1 805 aa7□□□□□ -1.29
ERCC4-204ENST00000573018 CYP26A1O43174 497 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 TIAF1O95411 115 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 PRNPP04156 253 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 ADMP35318 185 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 USP11P51784 963 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 IKBKEQ14164 716 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 TMEM164Q5U3C3 297 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 SMG8Q8ND04 991 aaKnown RBP6.99□□□□□ -1.29
ERCC4-204ENST00000573018 EDEM1Q92611 657 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 ASIC4Q96FT7 647 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 TBC1D32Q96NH3 1257 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 CYP4F12Q9HCS2 524 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
ERCC4-204ENST00000573018 LOC100289279A0A1B0GTE1 492 aa6.98□□□□□ -1.29
ERCC4-204ENST00000573018 DNM1Q05193 864 aaKnown RBP6.98□□□□□ -1.29
ERCC4-204ENST00000573018 CPSF6Q16630 551 aaKnown RBP eCLIP6.98□□□□□ -1.29
ERCC4-204ENST00000573018 C8orf34Q49A92 452 aa6.98□□□□□ -1.29
ERCC4-204ENST00000573018 VN1R5Q7Z5H4 357 aa6.98□□□□□ -1.29
ERCC4-204ENST00000573018 TMEM102Q8N9M5 508 aaPredicted RBP6.98□□□□□ -1.29
ERCC4-204ENST00000573018 FLCNQ8NFG4 579 aa6.98□□□□□ -1.29
ERCC4-204ENST00000573018 OSMRQ99650 979 aa6.98□□□□□ -1.29
ERCC4-204ENST00000573018 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.97□□□□□ -1.29
ERCC4-204ENST00000573018 FAM170BA6NMN3 283 aa6.97□□□□□ -1.29
ERCC4-204ENST00000573018 BSNDQ8WZ55 320 aa6.97□□□□□ -1.29
ERCC4-204ENST00000573018 ZKSCAN3Q9BRR0 538 aa6.97□□□□□ -1.29
ERCC4-204ENST00000573018 METTL22Q9BUU2 404 aaPredicted RBP6.97□□□□□ -1.29
ERCC4-204ENST00000573018 CHRDQ9H2X0 955 aa6.97□□□□□ -1.29
ERCC4-204ENST00000573018 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
ERCC4-204ENST00000573018 SUGCTQ9HAC7 445 aa6.97□□□□□ -1.29
ERCC4-204ENST00000573018 BSDC1Q9NW68 430 aaPredicted RBP6.97□□□□□ -1.29
ERCC4-204ENST00000573018 ITGB5P18084 799 aa6.96□□□□□ -1.3
ERCC4-204ENST00000573018 ZAR1Q86SH2 424 aa6.96□□□□□ -1.3
ERCC4-204ENST00000573018 POU5F2Q8N7G0 328 aa6.96□□□□□ -1.3
ERCC4-204ENST00000573018 ASAP3Q8TDY4 903 aa6.96□□□□□ -1.3
ERCC4-204ENST00000573018 NXPE3Q969Y0 559 aa6.96□□□□□ -1.3
ERCC4-204ENST00000573018 LRRC4CQ9HCJ2 640 aa6.96□□□□□ -1.3
ERCC4-204ENST00000573018 PRKAG2Q9UGJ0 569 aa6.96□□□□□ -1.3
ERCC4-204ENST00000573018 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
ERCC4-204ENST00000573018 C2CD4AQ8NCU7 369 aaPredicted RBP6.95□□□□□ -1.3
ERCC4-204ENST00000573018 KRTAP4-9Q9BYQ8 210 aa6.95□□□□□ -1.3
ERCC4-204ENST00000573018 PAK6Q9NQU5 681 aaPredicted RBP6.95□□□□□ -1.3
ERCC4-204ENST00000573018 EREGO14944 169 aa6.94□□□□□ -1.3
ERCC4-204ENST00000573018 PDGFAP04085 211 aa6.94□□□□□ -1.3
ERCC4-204ENST00000573018 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
ERCC4-204ENST00000573018 GSTM4Q03013 218 aa6.94□□□□□ -1.3
ERCC4-204ENST00000573018 EXOSC6Q5RKV6 272 aaKnown RBP6.94□□□□□ -1.3
ERCC4-204ENST00000573018 TTC16Q8NEE8 873 aa6.94□□□□□ -1.3
ERCC4-204ENST00000573018 CLP1Q92989 425 aaKnown RBP6.94□□□□□ -1.3
ERCC4-204ENST00000573018 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
ERCC4-204ENST00000573018 ESRRAP11474 423 aaPredicted RBP6.93□□□□□ -1.3
ERCC4-204ENST00000573018 PCSK2P16519 638 aa6.93□□□□□ -1.3
ERCC4-204ENST00000573018 JUNBP17275 347 aaPredicted RBP6.93□□□□□ -1.3
ERCC4-204ENST00000573018 SOX4Q06945 474 aaPredicted RBP6.93□□□□□ -1.3
ERCC4-204ENST00000573018 AGBL5Q8NDL9 886 aa6.93□□□□□ -1.3
ERCC4-204ENST00000573018 GATA6Q92908 595 aa6.93□□□□□ -1.3
ERCC4-204ENST00000573018 PMEPA1Q969W9 287 aa6.93□□□□□ -1.3
ERCC4-204ENST00000573018 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
ERCC4-204ENST00000573018 RAB6AP20340 208 aa6.92□□□□□ -1.3
ERCC4-204ENST00000573018 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
ERCC4-204ENST00000573018 ZNF648Q5T619 568 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-204ENST00000573018 EZH1Q92800 747 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-204ENST00000573018 YIPF2Q9BWQ6 316 aa6.92□□□□□ -1.3
ERCC4-204ENST00000573018 SOX17Q9H6I2 414 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-204ENST00000573018 METTL12A8MUP2 240 aa6.91□□□□□ -1.3
ERCC4-204ENST00000573018 ATG7O95352 703 aa6.91□□□□□ -1.3
ERCC4-204ENST00000573018 NFICP08651 508 aa6.91□□□□□ -1.3
ERCC4-204ENST00000573018 ADH5P11766 374 aa6.91□□□□□ -1.3
ERCC4-204ENST00000573018 SRPK2P78362 688 aaKnown RBP6.91□□□□□ -1.3
ERCC4-204ENST00000573018 ZNF765Q7L2R6 523 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms