RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 MANSC4A6NHS7 340 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 UNCXA6NJT0 531 aa12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 MYO1BO43795 1136 aa12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 PPP1R12BO60237 982 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 ZNF804AQ7Z570 1209 aa12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 FZD1Q9UP38 647 aa12.56□□□□□ -0.4
TRAPPC1-205ENST00000572656 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 ZBTB48P10074 688 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 SUPT20HL1Q3ZLR7 823 aa12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 BEND3Q5T5X7 828 aa12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 PRPF38BQ5VTL8 546 aaKnown RBP12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
TRAPPC1-205ENST00000572656 F6X3S4 739 aa12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 F8W031 263 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 WNK4Q96J92 1243 aa12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 PRMT6Q96LA8 375 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 PCDHAC2Q9Y5I4 1007 aa12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
TRAPPC1-205ENST00000572656 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC1-205ENST00000572656 CLRN2A0PK11 232 aa12.53□□□□□ -0.4
TRAPPC1-205ENST00000572656 CCDC57Q2TAC2 916 aa12.53□□□□□ -0.4
TRAPPC1-205ENST00000572656 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
TRAPPC1-205ENST00000572656 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
TRAPPC1-205ENST00000572656 VEZTQ9HBM0 779 aa12.53□□□□□ -0.4
TRAPPC1-205ENST00000572656 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC1-205ENST00000572656 SSC5DA1L4H1 1573 aa12.52□□□□□ -0.4
TRAPPC1-205ENST00000572656 GRM8O00222 908 aa12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 IGF2BP3O00425 579 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 PLIN1O60240 522 aa12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 IREB2P48200 963 aaKnown RBP12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 RBM5P52756 815 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 NBPF12Q5TAG4 269 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 ZNF594Q96JF6 807 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 CNNM1Q9NRU3 951 aa12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 JAG2Q9Y219 1238 aa12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 AOX1Q06278 1338 aa12.52□□□□□ -0.41
TRAPPC1-205ENST00000572656 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 RASA3Q14644 834 aa12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 OTUD7BQ6GQQ9 843 aa12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 MRS2Q9HD23 443 aa12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 FAM205AQ6ZU69 1335 aa12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
TRAPPC1-205ENST00000572656 MYH3P11055 1940 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 ALDH1L1O75891 902 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 GJA5P36382 358 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 UBE4AQ14139 1066 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 MFSD14BQ5SR56 506 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 INTS3Q68E01 1043 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 OTOP1Q7RTM1 612 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 ZNF70Q9UC06 446 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 TRIM17Q9Y577 477 aa12.5□□□□□ -0.41
TRAPPC1-205ENST00000572656 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC1-205ENST00000572656 HIBADHP31937 336 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-205ENST00000572656 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
TRAPPC1-205ENST00000572656 ERO1AQ96HE7 468 aa12.49□□□□□ -0.41
TRAPPC1-205ENST00000572656 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC1-205ENST00000572656 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC1-205ENST00000572656 TTF2Q9UNY4 1162 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-205ENST00000572656 GYG1P46976 350 aa12.48□□□□□ -0.41
TRAPPC1-205ENST00000572656 CRHR2Q13324 411 aa12.48□□□□□ -0.41
TRAPPC1-205ENST00000572656 PTPN18Q99952 460 aa12.48□□□□□ -0.41
TRAPPC1-205ENST00000572656 SRCIN1Q9C0H9 1055 aa12.48□□□□□ -0.41
TRAPPC1-205ENST00000572656 TDRD3Q9H7E2 651 aaKnown RBP12.48□□□□□ -0.41
TRAPPC1-205ENST00000572656 SLC4A10Q6U841 1118 aa12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 DZIP1LQ8IYY4 767 aaKnown RBP12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 CD99L2Q8TCZ2 262 aa12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 OPTNQ96CV9 577 aa12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 TEPSINQ96N21 525 aa12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 PUS3Q9BZE2 481 aaKnown RBP12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 ELP3Q9H9T3 547 aa12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 PTPN22Q9Y2R2 807 aa12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
TRAPPC1-205ENST00000572656 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 CRKP46108 304 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 TNNI2P48788 182 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 SP3Q02447 781 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 FBXO33Q7Z6M2 555 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 SUCLG2Q96I99 432 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
TRAPPC1-205ENST00000572656 UTYO14607 1347 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms