RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 SIK1P57059 783 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 C9orf131Q5VYM1 1079 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 KSR2Q6VAB6 950 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 NEUROD6Q96NK8 337 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 SLX1AQ9BQ83 275 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 MED4Q9NPJ6 270 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 COL24A1Q17RW2 1714 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 SREK1Q8WXA9 508 aaKnown RBP10.54□□□□□ -0.72
TVP23A-205ENST00000572428 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
TVP23A-205ENST00000572428 DDX49Q9Y6V7 483 aaKnown RBP10.54□□□□□ -0.72
TVP23A-205ENST00000572428 STARD3NLO95772 234 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 DNAJC10Q8IXB1 793 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 PTCD1O75127 700 aaKnown RBP10.53□□□□□ -0.72
TVP23A-205ENST00000572428 NFKBIBQ15653 356 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 BEND3Q5T5X7 828 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 DPH6Q7L8W6 267 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 MYH3P11055 1940 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 CNTNAP4Q9C0A0 1308 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 FKBP5Q13451 457 aaPredicted RBP10.53□□□□□ -0.72
TVP23A-205ENST00000572428 PTF1AQ7RTS3 328 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 KLHL23Q8NBE8 558 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 SYTL4Q96C24 671 aaPredicted RBP10.53□□□□□ -0.72
TVP23A-205ENST00000572428 UTYO14607 1347 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 COL15A1P39059 1388 aa10.53□□□□□ -0.72
TVP23A-205ENST00000572428 RC3H1Q5TC82 1133 aaKnown RBP10.52□□□□□ -0.72
TVP23A-205ENST00000572428 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.72
TVP23A-205ENST00000572428 DNAAF4Q8WXU2 420 aa10.52□□□□□ -0.72
TVP23A-205ENST00000572428 TSPYL1Q9H0U9 437 aa10.52□□□□□ -0.72
TVP23A-205ENST00000572428 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.72
TVP23A-205ENST00000572428 DDX58O95786 925 aaKnown RBP10.52□□□□□ -0.73
TVP23A-205ENST00000572428 TCF3P15923 654 aa10.52□□□□□ -0.73
TVP23A-205ENST00000572428 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
TVP23A-205ENST00000572428 ITPK1Q13572 414 aa10.52□□□□□ -0.73
TVP23A-205ENST00000572428 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.73
TVP23A-205ENST00000572428 PLBD2Q8NHP8 589 aa10.52□□□□□ -0.73
TVP23A-205ENST00000572428 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
TVP23A-205ENST00000572428 RETREG1Q9H6L5 497 aa10.52□□□□□ -0.73
TVP23A-205ENST00000572428 ALDH1L1O75891 902 aa10.52□□□□□ -0.73
TVP23A-205ENST00000572428 IRAK4Q9NWZ3 460 aa10.52□□□□□ -0.73
TVP23A-205ENST00000572428 A0A0G2JS52 829 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 A1BGP04217 495 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
TVP23A-205ENST00000572428 PRPF38AQ8NAV1 312 aaKnown RBP10.51□□□□□ -0.73
TVP23A-205ENST00000572428 RBM42Q9BTD8 480 aaKnown RBP10.51□□□□□ -0.73
TVP23A-205ENST00000572428 PI4KAP2A4QPH2 592 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 A6NJR5 290 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 ANXA1P04083 346 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 COPS6Q7L5N1 327 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 PI4KAP1Q8N8J0 262 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 XAGE3Q8WTP9 111 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 WWC3Q9ULE0 1092 aa10.51□□□□□ -0.73
TVP23A-205ENST00000572428 F6X3S4 739 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 TIMM44O43615 452 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 EIF5P55010 431 aaKnown RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 PPP2R5AQ15172 486 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 TIGD1Q96MW7 591 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 METTL22Q9BUU2 404 aaPredicted RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 RBM47A0AV96 593 aaKnown RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 HMGB2P26583 209 aaKnown RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 LARP1BQ659C4 914 aaKnown RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 ANKRD13DQ6ZTN6 518 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 ELOA2Q8IYF1 753 aaPredicted RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 GCC1Q96CN9 775 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 RSPH9Q9H1X1 276 aaPredicted RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 MAP3K2Q9Y2U5 619 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 DDX60Q8IY21 1712 aaKnown RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 PLSCR1O15162 318 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 SLC27A3Q5K4L6 730 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 FAM182BQ5T319 152 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
TVP23A-205ENST00000572428 LINS1Q8NG48 757 aa10.5□□□□□ -0.73
TVP23A-205ENST00000572428 CBX1P83916 185 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 CDC37Q16543 378 aaPredicted RBP10.49□□□□□ -0.73
TVP23A-205ENST00000572428 LONRF1Q17RB8 773 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 MAP9Q49MG5 647 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 CLASRPQ8N2M8 674 aaKnown RBP10.49□□□□□ -0.73
TVP23A-205ENST00000572428 INO80BQ9C086 356 aaPredicted RBP10.49□□□□□ -0.73
TVP23A-205ENST00000572428 MUC3BQ9H195 1237 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 CCDC87Q9NVE4 849 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 ERVV-1B6SEH8 477 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 MYL6BP14649 208 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 CRKLP46109 303 aaKnown RBP10.49□□□□□ -0.73
TVP23A-205ENST00000572428 LINC00116Q8NCU8 138 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 SNRNP27Q8WVK2 155 aaKnown RBP10.49□□□□□ -0.73
TVP23A-205ENST00000572428 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 PAXBP1Q9Y5B6 917 aa10.49□□□□□ -0.73
TVP23A-205ENST00000572428 RASA3Q14644 834 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 TRIM74Q86UV6 250 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 TRIM73Q86UV7 250 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 ARL10Q8N8L6 244 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 FAM184AQ8NB25 1140 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
TVP23A-205ENST00000572428 USP44Q9H0E7 712 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 UPF2Q9HAU5 1272 aaKnown RBP10.48□□□□□ -0.73
TVP23A-205ENST00000572428 SERPINA10Q9UK55 444 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 ANKRD33BA6NCL7 494 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 IGKV5-2P06315 115 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 TRIM28Q13263 835 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms