RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 COA1Q9GZY4 146 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 CD209Q9NNX6 404 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 COPRSQ9NQ92 184 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
SMG6-210ENST00000572205 STK24Q9Y6E0 443 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 FOCADQ5VW36 1801 aa10.9□□□□□ -0.66
SMG6-210ENST00000572205 EYA2O00167 538 aa10.89□□□□□ -0.67
SMG6-210ENST00000572205 CIAO1O76071 339 aa10.89□□□□□ -0.67
SMG6-210ENST00000572205 APLP1P51693 650 aa10.89□□□□□ -0.67
SMG6-210ENST00000572205 UBE4AQ14139 1066 aa10.89□□□□□ -0.67
SMG6-210ENST00000572205 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
SMG6-210ENST00000572205 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
SMG6-210ENST00000572205 PANK1Q8TE04 598 aa10.89□□□□□ -0.67
SMG6-210ENST00000572205 FAM84BQ96KN1 310 aaPredicted RBP10.89□□□□□ -0.67
SMG6-210ENST00000572205 CNOT7Q9UIV1 285 aaKnown RBP10.89□□□□□ -0.67
SMG6-210ENST00000572205 FAM205AQ6ZU69 1335 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 MYH2Q9UKX2 1941 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 ZBTB7BO15156 539 aaPredicted RBP10.88□□□□□ -0.67
SMG6-210ENST00000572205 PDE8BO95263 885 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
SMG6-210ENST00000572205 STRIP1Q5VSL9 837 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 DLK2Q6UY11 383 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 C16orf71Q8IYS4 520 aaPredicted RBP10.88□□□□□ -0.67
SMG6-210ENST00000572205 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 AGBL3Q8NEM8 1001 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 TDRD7Q8NHU6 1098 aaKnown RBP10.88□□□□□ -0.67
SMG6-210ENST00000572205 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
SMG6-210ENST00000572205 SIPA1L1O43166 1804 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 TRAF5O00463 557 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 IPO8O15397 1037 aaKnown RBP10.87□□□□□ -0.67
SMG6-210ENST00000572205 GNAI3P08754 354 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 CHRM1P11229 460 aaPredicted RBP10.87□□□□□ -0.67
SMG6-210ENST00000572205 LMOD1P29536 600 aaPredicted RBP10.87□□□□□ -0.67
SMG6-210ENST00000572205 GYG1P46976 350 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 GRIK5Q16478 980 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 TBC1D10BQ4KMP7 808 aaPredicted RBP10.87□□□□□ -0.67
SMG6-210ENST00000572205 C20orf194Q5TEA3 1177 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 DZIP1LQ8IYY4 767 aaKnown RBP10.87□□□□□ -0.67
SMG6-210ENST00000572205 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
SMG6-210ENST00000572205 DDX60LQ5H9U9 1706 aaKnown RBP10.87□□□□□ -0.67
SMG6-210ENST00000572205 PLIN1O60240 522 aa10.86□□□□□ -0.67
SMG6-210ENST00000572205 KIF4BQ2VIQ3 1234 aa10.86□□□□□ -0.67
SMG6-210ENST00000572205 CST9Q5W186 159 aa10.86□□□□□ -0.67
SMG6-210ENST00000572205 CNTROBQ8N137 903 aa10.86□□□□□ -0.67
SMG6-210ENST00000572205 SSH3Q8TE77 659 aa10.86□□□□□ -0.67
SMG6-210ENST00000572205 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
SMG6-210ENST00000572205 GLIS2Q9BZE0 524 aaPredicted RBP10.86□□□□□ -0.67
SMG6-210ENST00000572205 RCAN3Q9UKA8 241 aa10.86□□□□□ -0.67
SMG6-210ENST00000572205 CNTNAP1P78357 1384 aa10.86□□□□□ -0.67
SMG6-210ENST00000572205 MYO3BQ8WXR4 1341 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 SRGAP3O43295 1099 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 GNAI2P04899 355 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 FKBP1AP62942 108 aaKnown RBP10.85□□□□□ -0.67
SMG6-210ENST00000572205 GTF2IP78347 998 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
SMG6-210ENST00000572205 TAF7LQ5H9L4 462 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 METTL24Q5JXM2 366 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 JMYQ8N9B5 988 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 SIL1Q9H173 461 aa10.85□□□□□ -0.67
SMG6-210ENST00000572205 MYH7P12883 1935 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 ADM5C9JUS6 153 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 SASH1O94885 1247 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 ADORA1P30542 326 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 MVPQ14764 893 aaKnown RBP10.84□□□□□ -0.67
SMG6-210ENST00000572205 CEP85Q6P2H3 762 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 ZNF804AQ7Z570 1209 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 SIRT2Q8IXJ6 389 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 KLRG1Q96E93 195 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 MYOZ2Q9NPC6 264 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 GGA3Q9NZ52 723 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 JAG2Q9Y219 1238 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 RFX7Q2KHR2 1363 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
SMG6-210ENST00000572205 WNT10BO00744 389 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 USP17L8P0C7I0 530 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 IL15P40933 162 aaPredicted RBP10.83□□□□□ -0.68
SMG6-210ENST00000572205 KCNJ4P48050 445 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 BCAMP50895 628 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 NBPF9Q3BBW0 867 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 TTLL5Q6EMB2 1281 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 KIAA0825Q8IV33 1275 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 MTMR14Q8NCE2 650 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 LPIN2Q92539 896 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 ZBTB40Q9NUA8 1239 aa10.83□□□□□ -0.68
SMG6-210ENST00000572205 HTTP42858 3142 aa10.82□□□□□ -0.68
SMG6-210ENST00000572205 RASSF10A6NK89 507 aa10.82□□□□□ -0.68
SMG6-210ENST00000572205 HIBADHP31937 336 aaKnown RBP10.82□□□□□ -0.68
SMG6-210ENST00000572205 PHKA1P46020 1223 aa10.82□□□□□ -0.68
SMG6-210ENST00000572205 ATP2B3Q16720 1220 aa10.82□□□□□ -0.68
SMG6-210ENST00000572205 FTSJ3Q8IY81 847 aaKnown RBP10.82□□□□□ -0.68
SMG6-210ENST00000572205 IQSEC3Q9UPP2 1182 aaPredicted RBP10.82□□□□□ -0.68
SMG6-210ENST00000572205 NOP58Q9Y2X3 529 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 324 ms