RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ZBTB22O15209 634 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 DCPSQ96C86 337 aaKnown RBP17.23■□□□□ 0.35
RPAIN-211ENST00000572174 C1orf115Q9H7X2 142 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 MYOZ2Q9NPC6 264 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
RPAIN-211ENST00000572174 MAST3O60307 1309 aa17.22■□□□□ 0.35
RPAIN-211ENST00000572174 MFSD14BQ5SR56 506 aa17.22■□□□□ 0.35
RPAIN-211ENST00000572174 SAMD7Q7Z3H4 446 aa17.22■□□□□ 0.35
RPAIN-211ENST00000572174 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
RPAIN-211ENST00000572174 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
RPAIN-211ENST00000572174 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
RPAIN-211ENST00000572174 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
RPAIN-211ENST00000572174 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.35
RPAIN-211ENST00000572174 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
RPAIN-211ENST00000572174 TBC1D10BQ4KMP7 808 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-211ENST00000572174 MAP1SQ66K74 1059 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-211ENST00000572174 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.35
RPAIN-211ENST00000572174 WDR66Q8TBY9 1149 aa17.21■□□□□ 0.35
RPAIN-211ENST00000572174 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
RPAIN-211ENST00000572174 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
RPAIN-211ENST00000572174 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
RPAIN-211ENST00000572174 MYO1BO43795 1136 aa17.2■□□□□ 0.34
RPAIN-211ENST00000572174 KIAA0825Q8IV33 1275 aa17.2■□□□□ 0.34
RPAIN-211ENST00000572174 SULF1Q8IWU6 871 aa17.2■□□□□ 0.34
RPAIN-211ENST00000572174 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
RPAIN-211ENST00000572174 CREBZFQ9NS37 354 aa17.2■□□□□ 0.34
RPAIN-211ENST00000572174 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
RPAIN-211ENST00000572174 PDS5AQ29RF7 1337 aaKnown RBP17.2■□□□□ 0.34
RPAIN-211ENST00000572174 ITGBL1O95965 494 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-211ENST00000572174 BCAMP50895 628 aa17.19■□□□□ 0.34
RPAIN-211ENST00000572174 TFCP2Q12800 502 aa17.19■□□□□ 0.34
RPAIN-211ENST00000572174 GORABQ5T7V8 394 aa17.19■□□□□ 0.34
RPAIN-211ENST00000572174 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
RPAIN-211ENST00000572174 MYH2Q9UKX2 1941 aa17.19■□□□□ 0.34
RPAIN-211ENST00000572174 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
RPAIN-211ENST00000572174 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
RPAIN-211ENST00000572174 TMEM88BA6NKF7 163 aa17.18■□□□□ 0.34
RPAIN-211ENST00000572174 DLGAP5Q15398 846 aa17.18■□□□□ 0.34
RPAIN-211ENST00000572174 MTMR14Q8NCE2 650 aa17.18■□□□□ 0.34
RPAIN-211ENST00000572174 GGA3Q9NZ52 723 aa17.18■□□□□ 0.34
RPAIN-211ENST00000572174 HIRAP54198 1017 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-211ENST00000572174 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
RPAIN-211ENST00000572174 CHAF1AQ13111 956 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-211ENST00000572174 AAMPQ13685 434 aa17.17■□□□□ 0.34
RPAIN-211ENST00000572174 SCARF1Q14162 830 aa17.17■□□□□ 0.34
RPAIN-211ENST00000572174 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
RPAIN-211ENST00000572174 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
RPAIN-211ENST00000572174 NEUROD6Q96NK8 337 aa17.17■□□□□ 0.34
RPAIN-211ENST00000572174 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
RPAIN-211ENST00000572174 UQCRFS1P1P0C7P4 283 aa17.16■□□□□ 0.34
RPAIN-211ENST00000572174 CCDC102BQ68D86 513 aa17.16■□□□□ 0.34
RPAIN-211ENST00000572174 CERS5Q8N5B7 392 aa17.16■□□□□ 0.34
RPAIN-211ENST00000572174 XAGE2Q96GT9 111 aa17.16■□□□□ 0.34
RPAIN-211ENST00000572174 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
RPAIN-211ENST00000572174 TTF2Q9UNY4 1162 aaKnown RBP17.16■□□□□ 0.34
RPAIN-211ENST00000572174 IQSEC3Q9UPP2 1182 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-211ENST00000572174 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
RPAIN-211ENST00000572174 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
RPAIN-211ENST00000572174 WNT10BO00744 389 aa17.15■□□□□ 0.34
RPAIN-211ENST00000572174 RBM5P52756 815 aaKnown RBP eCLIP17.15■□□□□ 0.34
RPAIN-211ENST00000572174 TNNI3KQ59H18 835 aa17.15■□□□□ 0.34
RPAIN-211ENST00000572174 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
RPAIN-211ENST00000572174 C20orf194Q5TEA3 1177 aa17.15■□□□□ 0.34
RPAIN-211ENST00000572174 FPGT-TNNI3KV9GXZ4 949 aa17.15■□□□□ 0.34
RPAIN-211ENST00000572174 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
RPAIN-211ENST00000572174 F8W031 263 aaPredicted RBP17.14■□□□□ 0.33
RPAIN-211ENST00000572174 RAB11FIP3O75154 756 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 EGFRP00533 1210 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 PHKA1P46020 1223 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 TIMM10P62072 90 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 TNFAIP1Q13829 316 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
RPAIN-211ENST00000572174 SPTY2D1Q68D10 685 aaPredicted RBP17.14■□□□□ 0.33
RPAIN-211ENST00000572174 TEKT1Q969V4 418 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 MRIQ9BWK5 157 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
RPAIN-211ENST00000572174 JAG2Q9Y219 1238 aa17.14■□□□□ 0.33
RPAIN-211ENST00000572174 PAPPA2Q9BXP8 1791 aa17.13■□□□□ 0.33
RPAIN-211ENST00000572174 IGSF3O75054 1194 aa17.13■□□□□ 0.33
RPAIN-211ENST00000572174 CFAP100Q494V2 611 aa17.13■□□□□ 0.33
RPAIN-211ENST00000572174 SLF2Q8IX21 1173 aa17.13■□□□□ 0.33
RPAIN-211ENST00000572174 AK9Q5TCS8 1911 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 LDHBP07195 334 aaKnown RBP17.12■□□□□ 0.33
RPAIN-211ENST00000572174 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 ARID4AP29374 1257 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-211ENST00000572174 ADORA1P30542 326 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 NF2P35240 595 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 TTC39AQ5SRH9 613 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
RPAIN-211ENST00000572174 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-211ENST00000572174 TMOD2Q9NZR1 351 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 EXOC6BQ9Y2D4 811 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
RPAIN-211ENST00000572174 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms