RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 HDAC9Q9UKV0 1011 aa20.95■□□□□ 0.94
RAB40B-205ENST00000571880 FZD1Q9UP38 647 aa20.95■□□□□ 0.94
RAB40B-205ENST00000571880 AOX1Q06278 1338 aa20.95■□□□□ 0.94
RAB40B-205ENST00000571880 E9PSI1 815 aa20.94■□□□□ 0.94
RAB40B-205ENST00000571880 CCDC102AQ96A19 550 aa20.94■□□□□ 0.94
RAB40B-205ENST00000571880 CLRN2A0PK11 232 aa20.93■□□□□ 0.94
RAB40B-205ENST00000571880 CA12O43570 354 aa20.93■□□□□ 0.94
RAB40B-205ENST00000571880 GYG1P46976 350 aa20.93■□□□□ 0.94
RAB40B-205ENST00000571880 SLFN5Q08AF3 891 aa20.93■□□□□ 0.94
RAB40B-205ENST00000571880 ANKRD44Q8N8A2 993 aa20.93■□□□□ 0.94
RAB40B-205ENST00000571880 KLHDC4Q8TBB5 520 aa20.93■□□□□ 0.94
RAB40B-205ENST00000571880 TRPA1O75762 1119 aa20.92■□□□□ 0.94
RAB40B-205ENST00000571880 C15orf52Q6ZUT6 534 aaKnown RBP20.92■□□□□ 0.94
RAB40B-205ENST00000571880 IQSEC3Q9UPP2 1182 aaPredicted RBP20.92■□□□□ 0.94
RAB40B-205ENST00000571880 SSC5DA1L4H1 1573 aa20.91■□□□□ 0.94
RAB40B-205ENST00000571880 IL1R1P14778 569 aa20.91■□□□□ 0.94
RAB40B-205ENST00000571880 DLGAP5Q15398 846 aa20.91■□□□□ 0.94
RAB40B-205ENST00000571880 LRRC24Q50LG9 513 aa20.91■□□□□ 0.94
RAB40B-205ENST00000571880 APOBEC3FQ8IUX4 373 aaKnown RBP20.91■□□□□ 0.94
RAB40B-205ENST00000571880 ZBED3Q96IU2 234 aaPredicted RBP20.91■□□□□ 0.94
RAB40B-205ENST00000571880 SMC4Q9NTJ3 1288 aa20.91■□□□□ 0.94
RAB40B-205ENST00000571880 UTYO14607 1347 aa20.9■□□□□ 0.94
RAB40B-205ENST00000571880 PTPRCP08575 1304 aa20.9■□□□□ 0.94
RAB40B-205ENST00000571880 CCDC85CA6NKD9 419 aa20.9■□□□□ 0.94
RAB40B-205ENST00000571880 CFAP100Q494V2 611 aa20.9■□□□□ 0.94
RAB40B-205ENST00000571880 CSRNP1Q96S65 589 aa20.9■□□□□ 0.94
RAB40B-205ENST00000571880 MCOLN1Q9GZU1 580 aa20.9■□□□□ 0.94
RAB40B-205ENST00000571880 RNF186Q9NXI6 227 aa20.9■□□□□ 0.94
RAB40B-205ENST00000571880 NF2P35240 595 aa20.89■□□□□ 0.93
RAB40B-205ENST00000571880 RBM5P52756 815 aaKnown RBP eCLIP20.89■□□□□ 0.93
RAB40B-205ENST00000571880 FKBP1BP68106 108 aa20.89■□□□□ 0.93
RAB40B-205ENST00000571880 DGKZQ13574 1117 aa20.89■□□□□ 0.93
RAB40B-205ENST00000571880 VEZTQ9HBM0 779 aa20.89■□□□□ 0.93
RAB40B-205ENST00000571880 METTL24Q5JXM2 366 aa20.88■□□□□ 0.93
RAB40B-205ENST00000571880 CHAF1AQ13111 956 aaPredicted RBP20.87■□□□□ 0.93
RAB40B-205ENST00000571880 RABL6Q3YEC7 729 aaPredicted RBP20.87■□□□□ 0.93
RAB40B-205ENST00000571880 MFSD14BQ5SR56 506 aa20.87■□□□□ 0.93
RAB40B-205ENST00000571880 ANGEL1Q9UNK9 670 aaKnown RBP20.87■□□□□ 0.93
RAB40B-205ENST00000571880 RIPOR2Q9Y4F9 1068 aa20.87■□□□□ 0.93
RAB40B-205ENST00000571880 LAMB1P07942 1786 aa20.87■□□□□ 0.93
RAB40B-205ENST00000571880 COL1A1P02452 1464 aaPredicted RBP20.87■□□□□ 0.93
RAB40B-205ENST00000571880 SPDYE2BA6NHP3 402 aa20.86■□□□□ 0.93
RAB40B-205ENST00000571880 SPDYE6P0CI01 402 aa20.86■□□□□ 0.93
RAB40B-205ENST00000571880 PTPN12Q05209 780 aaKnown RBP20.86■□□□□ 0.93
RAB40B-205ENST00000571880 UBE4AQ14139 1066 aa20.86■□□□□ 0.93
RAB40B-205ENST00000571880 FAM84BQ96KN1 310 aaPredicted RBP20.86■□□□□ 0.93
RAB40B-205ENST00000571880 PRMT6Q96LA8 375 aaPredicted RBP20.86■□□□□ 0.93
RAB40B-205ENST00000571880 HIBADHP31937 336 aaKnown RBP20.85■□□□□ 0.93
RAB40B-205ENST00000571880 GRIK5Q16478 980 aa20.85■□□□□ 0.93
RAB40B-205ENST00000571880 USP44Q9H0E7 712 aa20.85■□□□□ 0.93
RAB40B-205ENST00000571880 DEFB129Q9H1M3 183 aa20.85■□□□□ 0.93
RAB40B-205ENST00000571880 SAGE1Q9NXZ1 904 aa20.85■□□□□ 0.93
RAB40B-205ENST00000571880 MROH5Q6ZUA9 1318 aa20.84■□□□□ 0.93
RAB40B-205ENST00000571880 TDRD7Q8NHU6 1098 aaKnown RBP20.84■□□□□ 0.93
RAB40B-205ENST00000571880 TTF2Q9UNY4 1162 aaKnown RBP20.84■□□□□ 0.93
RAB40B-205ENST00000571880 FAM205AQ6ZU69 1335 aa20.83■□□□□ 0.93
RAB40B-205ENST00000571880 AK9Q5TCS8 1911 aa20.83■□□□□ 0.93
RAB40B-205ENST00000571880 ARMC9Q7Z3E5 817 aa20.83■□□□□ 0.93
RAB40B-205ENST00000571880 VPS37DQ86XT2 251 aa20.83■□□□□ 0.93
RAB40B-205ENST00000571880 MYO1BO43795 1136 aa20.82■□□□□ 0.92
RAB40B-205ENST00000571880 FKBP1AP62942 108 aaKnown RBP20.82■□□□□ 0.92
RAB40B-205ENST00000571880 ALDH1L2Q3SY69 923 aa20.82■□□□□ 0.92
RAB40B-205ENST00000571880 CDAN1Q8IWY9 1227 aa20.82■□□□□ 0.92
RAB40B-205ENST00000571880 VGLL2Q8N8G2 317 aa20.82■□□□□ 0.92
RAB40B-205ENST00000571880 MTMR14Q8NCE2 650 aa20.82■□□□□ 0.92
RAB40B-205ENST00000571880 CLMNQ96JQ2 1002 aa20.82■□□□□ 0.92
RAB40B-205ENST00000571880 TBC1D8O95759 1140 aa20.81■□□□□ 0.92
RAB40B-205ENST00000571880 MMP14P50281 582 aa20.81■□□□□ 0.92
RAB40B-205ENST00000571880 NBPF12Q5TAG4 269 aaPredicted RBP20.81■□□□□ 0.92
RAB40B-205ENST00000571880 SIL1Q9H173 461 aa20.81■□□□□ 0.92
RAB40B-205ENST00000571880 TDRD3Q9H7E2 651 aaKnown RBP20.81■□□□□ 0.92
RAB40B-205ENST00000571880 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
RAB40B-205ENST00000571880 FRAT2O75474 233 aaPredicted RBP20.8■□□□□ 0.92
RAB40B-205ENST00000571880 BCAMP50895 628 aa20.8■□□□□ 0.92
RAB40B-205ENST00000571880 RASA3Q14644 834 aa20.79■□□□□ 0.92
RAB40B-205ENST00000571880 TRMT2AQ8IZ69 625 aaKnown RBP20.79■□□□□ 0.92
RAB40B-205ENST00000571880 ZNF70Q9UC06 446 aaPredicted RBP20.79■□□□□ 0.92
RAB40B-205ENST00000571880 TCP10L2B9ZVM9 353 aa20.78■□□□□ 0.92
RAB40B-205ENST00000571880 PDE8BO95263 885 aa20.78■□□□□ 0.92
RAB40B-205ENST00000571880 UBTFL1P0CB47 393 aaPredicted RBP20.78■□□□□ 0.92
RAB40B-205ENST00000571880 CRKP46108 304 aa20.78■□□□□ 0.92
RAB40B-205ENST00000571880 RFX5P48382 616 aaPredicted RBP20.78■□□□□ 0.92
RAB40B-205ENST00000571880 CACNB3P54284 484 aa20.78■□□□□ 0.92
RAB40B-205ENST00000571880 FBXO33Q7Z6M2 555 aa20.78■□□□□ 0.92
RAB40B-205ENST00000571880 SPDYE2Q495Y8 402 aa20.77■□□□□ 0.92
RAB40B-205ENST00000571880 CAVIN4Q5BKX8 364 aa20.77■□□□□ 0.92
RAB40B-205ENST00000571880 LDLRAD1Q5T700 205 aa20.77■□□□□ 0.92
RAB40B-205ENST00000571880 SPRYD7Q5W111 196 aa20.77■□□□□ 0.92
RAB40B-205ENST00000571880 DZIP1LQ8IYY4 767 aaKnown RBP20.77■□□□□ 0.92
RAB40B-205ENST00000571880 PPP2R3BQ9Y5P8 575 aa20.77■□□□□ 0.92
RAB40B-205ENST00000571880 MYH2Q9UKX2 1941 aa20.76■□□□□ 0.91
RAB40B-205ENST00000571880 CCER2I3L3R5 266 aa20.76■□□□□ 0.91
RAB40B-205ENST00000571880 EYA2O00167 538 aa20.76■□□□□ 0.91
RAB40B-205ENST00000571880 PUM3Q15397 648 aaKnown RBP20.76■□□□□ 0.91
RAB40B-205ENST00000571880 R3HDMLQ9H3Y0 253 aa20.76■□□□□ 0.91
RAB40B-205ENST00000571880 LRRFIP2Q9Y608 721 aaKnown RBP20.76■□□□□ 0.91
RAB40B-205ENST00000571880 WNK4Q96J92 1243 aa20.75■□□□□ 0.91
RAB40B-205ENST00000571880 MEIS3Q99687 375 aa20.75■□□□□ 0.91
RAB40B-205ENST00000571880 TMEM39BQ9GZU3 492 aa20.75■□□□□ 0.91
RAB40B-205ENST00000571880 SERPINA10Q9UK55 444 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms