RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
LITAF-208ENST00000571627 TDRD7Q8NHU6 1098 aaKnown RBP18.15■□□□□ 0.5
LITAF-208ENST00000571627 TLL2Q9Y6L7 1015 aa18.15■□□□□ 0.5
LITAF-208ENST00000571627 RLBP1P12271 317 aa18.14■□□□□ 0.49
LITAF-208ENST00000571627 PUM3Q15397 648 aaKnown RBP18.14■□□□□ 0.49
LITAF-208ENST00000571627 PAXIP1Q6ZW49 1069 aaPredicted RBP18.14■□□□□ 0.49
LITAF-208ENST00000571627 VPS37DQ86XT2 251 aa18.14■□□□□ 0.49
LITAF-208ENST00000571627 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
LITAF-208ENST00000571627 HDAC9Q9UKV0 1011 aa18.14■□□□□ 0.49
LITAF-208ENST00000571627 WNT10BO00744 389 aa18.13■□□□□ 0.49
LITAF-208ENST00000571627 FGFR2P21802 821 aa18.13■□□□□ 0.49
LITAF-208ENST00000571627 BCAMP50895 628 aa18.13■□□□□ 0.49
LITAF-208ENST00000571627 GRM1Q13255 1194 aa18.13■□□□□ 0.49
LITAF-208ENST00000571627 FBXO33Q7Z6M2 555 aa18.13■□□□□ 0.49
LITAF-208ENST00000571627 PCDHAC2Q9Y5I4 1007 aa18.13■□□□□ 0.49
LITAF-208ENST00000571627 FAM205AQ6ZU69 1335 aa18.13■□□□□ 0.49
LITAF-208ENST00000571627 SRGAP3O43295 1099 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 CIAO1O76071 339 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 GNAI2P04899 355 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 HSPA1AP0DMV8 641 aaKnown RBP18.12■□□□□ 0.49
LITAF-208ENST00000571627 HSPA1BP0DMV9 641 aaKnown RBP18.12■□□□□ 0.49
LITAF-208ENST00000571627 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
LITAF-208ENST00000571627 CAVIN4Q5BKX8 364 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 CYP4F22Q6NT55 531 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 SAPCD2Q86UD0 394 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 DZIP1LQ8IYY4 767 aaKnown RBP18.12■□□□□ 0.49
LITAF-208ENST00000571627 CDCA5Q96FF9 252 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 PITPNM2Q9BZ72 1349 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 THSD7BQ9C0I4 1608 aa18.12■□□□□ 0.49
LITAF-208ENST00000571627 IFIT1P09914 478 aaKnown RBP18.11■□□□□ 0.49
LITAF-208ENST00000571627 SLC5A1P13866 664 aa18.11■□□□□ 0.49
LITAF-208ENST00000571627 FKBP1AP62942 108 aaKnown RBP18.11■□□□□ 0.49
LITAF-208ENST00000571627 MTX1Q13505 466 aa18.11■□□□□ 0.49
LITAF-208ENST00000571627 ITPRIPQ8IWB1 547 aa18.11■□□□□ 0.49
LITAF-208ENST00000571627 CAPNS2Q96L46 248 aa18.11■□□□□ 0.49
LITAF-208ENST00000571627 COPRSQ9NQ92 184 aa18.11■□□□□ 0.49
LITAF-208ENST00000571627 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
LITAF-208ENST00000571627 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
LITAF-208ENST00000571627 FRAT2O75474 233 aaPredicted RBP18.1■□□□□ 0.49
LITAF-208ENST00000571627 ATP2B3Q16720 1220 aa18.1■□□□□ 0.49
LITAF-208ENST00000571627 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
LITAF-208ENST00000571627 LPIN2Q92539 896 aa18.1■□□□□ 0.49
LITAF-208ENST00000571627 ZBED3Q96IU2 234 aaPredicted RBP18.1■□□□□ 0.49
LITAF-208ENST00000571627 CEP126Q9P2H0 1117 aa18.1■□□□□ 0.49
LITAF-208ENST00000571627 AOX1Q06278 1338 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 PNMA6EA0A0J9YXQ4 647 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 IL15P40933 162 aaPredicted RBP18.09■□□□□ 0.49
LITAF-208ENST00000571627 MMP14P50281 582 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 DLGAP5Q15398 846 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 GRIK5Q16478 980 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 CFAP100Q494V2 611 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 PANK1Q8TE04 598 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
LITAF-208ENST00000571627 GBA2Q9HCG7 927 aaPredicted RBP18.09■□□□□ 0.49
LITAF-208ENST00000571627 COL1A1P02452 1464 aaPredicted RBP18.08■□□□□ 0.49
LITAF-208ENST00000571627 HUNKP57058 714 aa18.08■□□□□ 0.48
LITAF-208ENST00000571627 PAPPA2Q9BXP8 1791 aa18.07■□□□□ 0.48
LITAF-208ENST00000571627 AOC2O75106 756 aa18.07■□□□□ 0.48
LITAF-208ENST00000571627 ECE1P42892 770 aa18.07■□□□□ 0.48
LITAF-208ENST00000571627 RBM5P52756 815 aaKnown RBP eCLIP18.07■□□□□ 0.48
LITAF-208ENST00000571627 C2orf69Q8N8R5 385 aa18.07■□□□□ 0.48
LITAF-208ENST00000571627 MTMR14Q8NCE2 650 aa18.07■□□□□ 0.48
LITAF-208ENST00000571627 TTF2Q9UNY4 1162 aaKnown RBP18.07■□□□□ 0.48
LITAF-208ENST00000571627 CLRN2A0PK11 232 aa18.06■□□□□ 0.48
LITAF-208ENST00000571627 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
LITAF-208ENST00000571627 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
LITAF-208ENST00000571627 ADORA1P30542 326 aa18.06■□□□□ 0.48
LITAF-208ENST00000571627 TFCP2Q12800 502 aa18.06■□□□□ 0.48
LITAF-208ENST00000571627 HHIPL1Q96JK4 782 aa18.06■□□□□ 0.48
LITAF-208ENST00000571627 PRMT6Q96LA8 375 aaPredicted RBP18.06■□□□□ 0.48
LITAF-208ENST00000571627 RCAN3Q9UKA8 241 aa18.06■□□□□ 0.48
LITAF-208ENST00000571627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.06■□□□□ 0.48
LITAF-208ENST00000571627 ZBTB7BO15156 539 aaPredicted RBP18.05■□□□□ 0.48
LITAF-208ENST00000571627 MS4A1P11836 297 aa18.05■□□□□ 0.48
LITAF-208ENST00000571627 MOB2Q70IA6 237 aa18.05■□□□□ 0.48
LITAF-208ENST00000571627 APOBEC3FQ8IUX4 373 aaKnown RBP18.05■□□□□ 0.48
LITAF-208ENST00000571627 PHKA1P46020 1223 aa18.04■□□□□ 0.48
LITAF-208ENST00000571627 TIMM10P62072 90 aa18.04■□□□□ 0.48
LITAF-208ENST00000571627 TBC1D22AQ8WUA7 517 aa18.04■□□□□ 0.48
LITAF-208ENST00000571627 FOXN1O15353 648 aa18.03■□□□□ 0.48
LITAF-208ENST00000571627 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
LITAF-208ENST00000571627 VEZTQ9HBM0 779 aa18.03■□□□□ 0.48
LITAF-208ENST00000571627 SERPINA10Q9UK55 444 aa18.03■□□□□ 0.48
LITAF-208ENST00000571627 A0A1B0GUL7 405 aa18.02■□□□□ 0.48
LITAF-208ENST00000571627 MYO1BO43795 1136 aa18.02■□□□□ 0.48
LITAF-208ENST00000571627 CRKP46108 304 aa18.02■□□□□ 0.48
LITAF-208ENST00000571627 POLA2Q14181 598 aa18.02■□□□□ 0.48
LITAF-208ENST00000571627 RGMBQ6NW40 437 aa18.02■□□□□ 0.48
LITAF-208ENST00000571627 WBP1LQ9NX94 342 aa18.02■□□□□ 0.48
LITAF-208ENST00000571627 ATP8B2P98198 1209 aa18.01■□□□□ 0.47
LITAF-208ENST00000571627 G3BP1Q13283 466 aaKnown RBP eCLIP18.01■□□□□ 0.47
LITAF-208ENST00000571627 CCDC102BQ68D86 513 aa18.01■□□□□ 0.47
LITAF-208ENST00000571627 SSH3Q8TE77 659 aa18.01■□□□□ 0.47
LITAF-208ENST00000571627 AIDAQ96BJ3 306 aa18.01■□□□□ 0.47
LITAF-208ENST00000571627 ZIC5Q96T25 663 aa18.01■□□□□ 0.47
LITAF-208ENST00000571627 DEFB129Q9H1M3 183 aa18.01■□□□□ 0.47
LITAF-208ENST00000571627 TDRD3Q9H7E2 651 aaKnown RBP18.01■□□□□ 0.47
LITAF-208ENST00000571627 GNL3LQ9NVN8 582 aaKnown RBP18.01■□□□□ 0.47
LITAF-208ENST00000571627 SSC5DA1L4H1 1573 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms