RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 PDE6AP16499 860 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 TMED8Q6PL24 325 aaPredicted RBP23.19■■□□□ 1.3
RPAIN-210ENST00000571613 FAM84BQ96KN1 310 aaPredicted RBP23.19■■□□□ 1.3
RPAIN-210ENST00000571613 LIMCH1Q9UPQ0 1083 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
RPAIN-210ENST00000571613 ADCK5Q3MIX3 580 aa23.18■■□□□ 1.3
RPAIN-210ENST00000571613 ZSCAN31Q96LW9 406 aaPredicted RBP23.18■■□□□ 1.3
RPAIN-210ENST00000571613 PARP3Q9Y6F1 533 aa23.18■■□□□ 1.3
RPAIN-210ENST00000571613 XDHP47989 1333 aa23.18■■□□□ 1.3
RPAIN-210ENST00000571613 GPAA1O43292 621 aa23.17■■□□□ 1.3
RPAIN-210ENST00000571613 HIBADHP31937 336 aaKnown RBP23.17■■□□□ 1.3
RPAIN-210ENST00000571613 GYG1P46976 350 aa23.17■■□□□ 1.3
RPAIN-210ENST00000571613 CAMKK2Q96RR4 588 aa23.17■■□□□ 1.3
RPAIN-210ENST00000571613 ANKIB1Q9P2G1 1089 aa23.17■■□□□ 1.3
RPAIN-210ENST00000571613 PNPLA7Q6ZV29 1317 aa23.17■■□□□ 1.3
RPAIN-210ENST00000571613 ZNF532Q9HCE3 1301 aa23.17■■□□□ 1.3
RPAIN-210ENST00000571613 TAF1P21675 1872 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 PUS7LQ9H0K6 701 aaKnown RBP23.16■■□□□ 1.3
RPAIN-210ENST00000571613 STK32BQ9NY57 414 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 LRP2BPQ9P2M1 347 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 EP400Q96L91 3159 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 CYP21A2P08686 494 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 AK2P54819 239 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 NUCB2P80303 420 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 NFKBIBQ15653 356 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 SLFNL1Q499Z3 407 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 C15orf52Q6ZUT6 534 aaKnown RBP23.16■■□□□ 1.3
RPAIN-210ENST00000571613 NEK1Q96PY6 1258 aa23.16■■□□□ 1.3
RPAIN-210ENST00000571613 SH2B1Q9NRF2 756 aaPredicted RBP23.16■■□□□ 1.3
RPAIN-210ENST00000571613 TCRBV5S4A2TA0A5A2 114 aa23.15■■□□□ 1.3
RPAIN-210ENST00000571613 RPS6KB1P23443 525 aa23.15■■□□□ 1.3
RPAIN-210ENST00000571613 SLC15A2Q16348 729 aa23.15■■□□□ 1.3
RPAIN-210ENST00000571613 FRAT2O75474 233 aaPredicted RBP23.14■■□□□ 1.29
RPAIN-210ENST00000571613 PDE6BP35913 854 aa23.14■■□□□ 1.29
RPAIN-210ENST00000571613 NBR1Q14596 966 aa23.14■■□□□ 1.29
RPAIN-210ENST00000571613 IMMTQ16891 758 aaKnown RBP23.14■■□□□ 1.29
RPAIN-210ENST00000571613 AIDAQ96BJ3 306 aa23.14■■□□□ 1.29
RPAIN-210ENST00000571613 WWC3Q9ULE0 1092 aa23.14■■□□□ 1.29
RPAIN-210ENST00000571613 GNAT2P19087 354 aa23.13■■□□□ 1.29
RPAIN-210ENST00000571613 ATP2B4P23634 1241 aa23.13■■□□□ 1.29
RPAIN-210ENST00000571613 BAG6P46379 1132 aa23.13■■□□□ 1.29
RPAIN-210ENST00000571613 MAGEB6Q8N7X4 407 aa23.13■■□□□ 1.29
RPAIN-210ENST00000571613 DOCK2Q92608 1830 aa23.13■■□□□ 1.29
RPAIN-210ENST00000571613 EZH2Q15910 746 aaKnown RBP23.13■■□□□ 1.29
RPAIN-210ENST00000571613 FOXD4L1Q9NU39 408 aa23.13■■□□□ 1.29
RPAIN-210ENST00000571613 NRXN2Q9P2S2 1712 aa23.12■■□□□ 1.29
RPAIN-210ENST00000571613 MMP10P09238 476 aa23.12■■□□□ 1.29
RPAIN-210ENST00000571613 EN1Q05925 392 aaPredicted RBP23.12■■□□□ 1.29
RPAIN-210ENST00000571613 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.12■■□□□ 1.29
RPAIN-210ENST00000571613 NPR1P16066 1061 aa23.11■■□□□ 1.29
RPAIN-210ENST00000571613 ALDH1B1P30837 517 aa23.11■■□□□ 1.29
RPAIN-210ENST00000571613 RAB3GAP1Q15042 981 aa23.11■■□□□ 1.29
RPAIN-210ENST00000571613 ZGPATQ8N5A5 531 aaKnown RBP23.11■■□□□ 1.29
RPAIN-210ENST00000571613 PODXL2Q9NZ53 605 aa23.11■■□□□ 1.29
RPAIN-210ENST00000571613 ZMYM6O95789 1325 aa23.11■■□□□ 1.29
RPAIN-210ENST00000571613 FGAP02671 866 aa23.1■■□□□ 1.29
RPAIN-210ENST00000571613 ALX1Q15699 326 aa23.1■■□□□ 1.29
RPAIN-210ENST00000571613 ZNF804AQ7Z570 1209 aa23.1■■□□□ 1.29
RPAIN-210ENST00000571613 IRS2Q9Y4H2 1338 aa23.09■■□□□ 1.29
RPAIN-210ENST00000571613 NOL8Q76FK4 1167 aaKnown RBP23.09■■□□□ 1.29
RPAIN-210ENST00000571613 SP8Q8IXZ3 490 aa23.09■■□□□ 1.29
RPAIN-210ENST00000571613 STRBPQ96SI9 672 aaKnown RBP23.09■■□□□ 1.29
RPAIN-210ENST00000571613 ABCF2Q9UG63 623 aa23.09■■□□□ 1.29
RPAIN-210ENST00000571613 GGA1Q9UJY5 639 aa23.09■■□□□ 1.29
RPAIN-210ENST00000571613 SPTY2D1Q68D10 685 aaPredicted RBP23.09■■□□□ 1.29
RPAIN-210ENST00000571613 DHX32Q7L7V1 743 aaKnown RBP23.09■■□□□ 1.29
RPAIN-210ENST00000571613 RAI14Q9P0K7 980 aa23.09■■□□□ 1.29
RPAIN-210ENST00000571613 PATL2C9JE40 543 aaKnown RBP23.08■■□□□ 1.29
RPAIN-210ENST00000571613 ZNF213O14771 459 aa23.08■■□□□ 1.29
RPAIN-210ENST00000571613 CPA1P15085 419 aa23.08■■□□□ 1.29
RPAIN-210ENST00000571613 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
RPAIN-210ENST00000571613 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.29
RPAIN-210ENST00000571613 IQSEC3Q9UPP2 1182 aaPredicted RBP23.08■■□□□ 1.29
RPAIN-210ENST00000571613 WTIPA6NIX2 430 aaPredicted RBP23.07■■□□□ 1.28
RPAIN-210ENST00000571613 E7EWF7 191 aa23.07■■□□□ 1.28
RPAIN-210ENST00000571613 SRGNP10124 158 aa23.07■■□□□ 1.28
RPAIN-210ENST00000571613 GBP4Q96PP9 640 aa23.07■■□□□ 1.28
RPAIN-210ENST00000571613 NACAP1Q9BZK3 213 aa23.07■■□□□ 1.28
RPAIN-210ENST00000571613 PPEF1O14829 653 aaPredicted RBP23.06■■□□□ 1.28
RPAIN-210ENST00000571613 FOXP2O15409 715 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 APPP05067 770 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 CYP7A1P22680 504 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 GPSM2P81274 684 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 WDR66Q8TBY9 1149 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 MASTLQ96GX5 879 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 QSER1Q2KHR3 1735 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 SALL1Q9NSC2 1324 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 PDIA4P13667 645 aaKnown RBP23.06■■□□□ 1.28
RPAIN-210ENST00000571613 KLRK1P26718 216 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 CHMP4CQ96CF2 233 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 ATP6V0A2Q9Y487 856 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 TAF6LQ9Y6J9 622 aa23.06■■□□□ 1.28
RPAIN-210ENST00000571613 COL1A1P02452 1464 aaPredicted RBP23.05■■□□□ 1.28
RPAIN-210ENST00000571613 UFL1O94874 794 aa23.05■■□□□ 1.28
RPAIN-210ENST00000571613 MBD4O95243 580 aa23.05■■□□□ 1.28
RPAIN-210ENST00000571613 TDRD7Q8NHU6 1098 aaKnown RBP23.05■■□□□ 1.28
RPAIN-210ENST00000571613 ANO8Q9HCE9 1232 aaPredicted RBP23.05■■□□□ 1.28
RPAIN-210ENST00000571613 NAA16Q6N069 864 aaPredicted RBP23.04■■□□□ 1.28
RPAIN-210ENST00000571613 FBXL16Q8N461 479 aa23.04■■□□□ 1.28
RPAIN-210ENST00000571613 MYO5AQ9Y4I1 1855 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms