RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 METTL24Q5JXM2 366 aa17.28■□□□□ 0.36
RAB40B-204ENST00000571554 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
RAB40B-204ENST00000571554 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-204ENST00000571554 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
RAB40B-204ENST00000571554 MROH5Q6ZUA9 1318 aa17.26■□□□□ 0.35
RAB40B-204ENST00000571554 PAPPA2Q9BXP8 1791 aa17.26■□□□□ 0.35
RAB40B-204ENST00000571554 FAM155AB1AL88 458 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-204ENST00000571554 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
RAB40B-204ENST00000571554 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-204ENST00000571554 AOX1Q06278 1338 aa17.25■□□□□ 0.35
RAB40B-204ENST00000571554 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-204ENST00000571554 HIBADHP31937 336 aaKnown RBP17.25■□□□□ 0.35
RAB40B-204ENST00000571554 NOGQ13253 232 aa17.25■□□□□ 0.35
RAB40B-204ENST00000571554 PRKG1Q13976 671 aa17.25■□□□□ 0.35
RAB40B-204ENST00000571554 TTLL12Q14166 644 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-204ENST00000571554 DLGAP5Q15398 846 aa17.25■□□□□ 0.35
RAB40B-204ENST00000571554 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
RAB40B-204ENST00000571554 ZBED3Q96IU2 234 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-204ENST00000571554 CLRN2A0PK11 232 aa17.24■□□□□ 0.35
RAB40B-204ENST00000571554 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
RAB40B-204ENST00000571554 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-204ENST00000571554 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
RAB40B-204ENST00000571554 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-204ENST00000571554 KIF23Q02241 960 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-204ENST00000571554 CHAF1AQ13111 956 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-204ENST00000571554 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
RAB40B-204ENST00000571554 TDRD7Q8NHU6 1098 aaKnown RBP17.24■□□□□ 0.35
RAB40B-204ENST00000571554 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
RAB40B-204ENST00000571554 FZD1Q9UP38 647 aa17.24■□□□□ 0.35
RAB40B-204ENST00000571554 ECM29Q5VYK3 1845 aa17.24■□□□□ 0.35
RAB40B-204ENST00000571554 SLC10A3P09131 477 aa17.23■□□□□ 0.35
RAB40B-204ENST00000571554 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-204ENST00000571554 MFSD14BQ5SR56 506 aa17.23■□□□□ 0.35
RAB40B-204ENST00000571554 VPS37DQ86XT2 251 aa17.23■□□□□ 0.35
RAB40B-204ENST00000571554 APOBEC3FQ8IUX4 373 aaKnown RBP17.23■□□□□ 0.35
RAB40B-204ENST00000571554 VGLL2Q8N8G2 317 aa17.23■□□□□ 0.35
RAB40B-204ENST00000571554 SIL1Q9H173 461 aa17.23■□□□□ 0.35
RAB40B-204ENST00000571554 TNNQ9UQP3 1299 aa17.23■□□□□ 0.35
RAB40B-204ENST00000571554 ARAP2Q8WZ64 1704 aa17.23■□□□□ 0.35
RAB40B-204ENST00000571554 PDE8BO95263 885 aa17.22■□□□□ 0.35
RAB40B-204ENST00000571554 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
RAB40B-204ENST00000571554 RASAL3Q86YV0 1011 aa17.22■□□□□ 0.35
RAB40B-204ENST00000571554 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
RAB40B-204ENST00000571554 PRMT6Q96LA8 375 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-204ENST00000571554 MEIS3Q99687 375 aa17.22■□□□□ 0.35
RAB40B-204ENST00000571554 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
RAB40B-204ENST00000571554 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-204ENST00000571554 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
RAB40B-204ENST00000571554 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
RAB40B-204ENST00000571554 CASP8AP2Q9UKL3 1982 aa17.21■□□□□ 0.35
RAB40B-204ENST00000571554 MMP14P50281 582 aa17.21■□□□□ 0.35
RAB40B-204ENST00000571554 BCAMP50895 628 aa17.21■□□□□ 0.35
RAB40B-204ENST00000571554 FKBP1AP62942 108 aaKnown RBP17.21■□□□□ 0.35
RAB40B-204ENST00000571554 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
RAB40B-204ENST00000571554 GRIK5Q16478 980 aa17.21■□□□□ 0.35
RAB40B-204ENST00000571554 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
RAB40B-204ENST00000571554 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 EYA2O00167 538 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
RAB40B-204ENST00000571554 BCAR3O75815 825 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 NF2P35240 595 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 FKBP1BP68106 108 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
RAB40B-204ENST00000571554 CAVIN4Q5BKX8 364 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 FRAT1Q92837 279 aaPredicted RBP17.2■□□□□ 0.34
RAB40B-204ENST00000571554 DEFB129Q9H1M3 183 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 KIF16BQ96L93 1317 aa17.2■□□□□ 0.34
RAB40B-204ENST00000571554 PUM3Q15397 648 aaKnown RBP17.19■□□□□ 0.34
RAB40B-204ENST00000571554 ATG9AQ7Z3C6 839 aa17.19■□□□□ 0.34
RAB40B-204ENST00000571554 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
RAB40B-204ENST00000571554 AKAP11Q9UKA4 1901 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 MYH13Q9UKX3 1938 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 CA12O43570 354 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 MYO1BO43795 1136 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 FGFR2P21802 821 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 CSRNP1Q96S65 589 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 ANGEL1Q9UNK9 670 aaKnown RBP17.18■□□□□ 0.34
RAB40B-204ENST00000571554 SSC5DA1L4H1 1573 aa17.18■□□□□ 0.34
RAB40B-204ENST00000571554 TRPA1O75762 1119 aa17.17■□□□□ 0.34
RAB40B-204ENST00000571554 IFIT1P09914 478 aaKnown RBP17.17■□□□□ 0.34
RAB40B-204ENST00000571554 TDRD3Q9H7E2 651 aaKnown RBP17.17■□□□□ 0.34
RAB40B-204ENST00000571554 SLC5A1P13866 664 aa17.16■□□□□ 0.34
RAB40B-204ENST00000571554 TRIM27P14373 513 aa17.16■□□□□ 0.34
RAB40B-204ENST00000571554 CRKP46108 304 aa17.16■□□□□ 0.34
RAB40B-204ENST00000571554 INTS3Q68E01 1043 aaKnown RBP17.16■□□□□ 0.34
RAB40B-204ENST00000571554 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
RAB40B-204ENST00000571554 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
RAB40B-204ENST00000571554 COL1A1P02452 1464 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-204ENST00000571554 NBPF12Q5TAG4 269 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-204ENST00000571554 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
RAB40B-204ENST00000571554 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
RAB40B-204ENST00000571554 ZNF70Q9UC06 446 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-204ENST00000571554 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
RAB40B-204ENST00000571554 TCP10L2B9ZVM9 353 aa17.14■□□□□ 0.33
RAB40B-204ENST00000571554 RASA3Q14644 834 aa17.14■□□□□ 0.33
RAB40B-204ENST00000571554 ATP2B3Q16720 1220 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms