RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
PRPF8-202ENST00000571346 PRAMEF18Q5VWM3 479 aa17.12■□□□□ 0.33
PRPF8-202ENST00000571346 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
PRPF8-202ENST00000571346 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
PRPF8-202ENST00000571346 MMP14P50281 582 aa17.11■□□□□ 0.33
PRPF8-202ENST00000571346 TTLL12Q14166 644 aaPredicted RBP17.11■□□□□ 0.33
PRPF8-202ENST00000571346 DLGAP5Q15398 846 aa17.11■□□□□ 0.33
PRPF8-202ENST00000571346 LRRC24Q50LG9 513 aa17.11■□□□□ 0.33
PRPF8-202ENST00000571346 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
PRPF8-202ENST00000571346 APOBEC3FQ8IUX4 373 aaKnown RBP17.11■□□□□ 0.33
PRPF8-202ENST00000571346 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
PRPF8-202ENST00000571346 KIF16BQ96L93 1317 aa17.11■□□□□ 0.33
PRPF8-202ENST00000571346 UBTFL1P0CB47 393 aaPredicted RBP17.1■□□□□ 0.33
PRPF8-202ENST00000571346 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
PRPF8-202ENST00000571346 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
PRPF8-202ENST00000571346 ZIC5Q96T25 663 aa17.1■□□□□ 0.33
PRPF8-202ENST00000571346 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
PRPF8-202ENST00000571346 NF2P35240 595 aa17.09■□□□□ 0.33
PRPF8-202ENST00000571346 RBM5P52756 815 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRPF8-202ENST00000571346 MFSD14BQ5SR56 506 aa17.09■□□□□ 0.33
PRPF8-202ENST00000571346 MOB2Q70IA6 237 aa17.09■□□□□ 0.33
PRPF8-202ENST00000571346 CCDC102AQ96A19 550 aa17.09■□□□□ 0.33
PRPF8-202ENST00000571346 IQSEC3Q9UPP2 1182 aaPredicted RBP17.09■□□□□ 0.33
PRPF8-202ENST00000571346 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
PRPF8-202ENST00000571346 FAM155AB1AL88 458 aaPredicted RBP17.08■□□□□ 0.32
PRPF8-202ENST00000571346 CA12O43570 354 aa17.08■□□□□ 0.32
PRPF8-202ENST00000571346 MYO1BO43795 1136 aa17.08■□□□□ 0.32
PRPF8-202ENST00000571346 SLC10A3P09131 477 aa17.08■□□□□ 0.32
PRPF8-202ENST00000571346 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.32
PRPF8-202ENST00000571346 FKBP1BP68106 108 aa17.08■□□□□ 0.32
PRPF8-202ENST00000571346 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
PRPF8-202ENST00000571346 CFAP100Q494V2 611 aa17.08■□□□□ 0.32
PRPF8-202ENST00000571346 FAM84BQ96KN1 310 aaPredicted RBP17.08■□□□□ 0.32
PRPF8-202ENST00000571346 PCDHAC2Q9Y5I4 1007 aa17.08■□□□□ 0.32
PRPF8-202ENST00000571346 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
PRPF8-202ENST00000571346 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
PRPF8-202ENST00000571346 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
PRPF8-202ENST00000571346 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRPF8-202ENST00000571346 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
PRPF8-202ENST00000571346 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
PRPF8-202ENST00000571346 MIER1Q8N108 512 aa17.07■□□□□ 0.32
PRPF8-202ENST00000571346 ZBED3Q96IU2 234 aaPredicted RBP17.07■□□□□ 0.32
PRPF8-202ENST00000571346 SIL1Q9H173 461 aa17.07■□□□□ 0.32
PRPF8-202ENST00000571346 VEZTQ9HBM0 779 aa17.07■□□□□ 0.32
PRPF8-202ENST00000571346 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
PRPF8-202ENST00000571346 FAM205AQ6ZU69 1335 aa17.06■□□□□ 0.32
PRPF8-202ENST00000571346 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
PRPF8-202ENST00000571346 PDE8BO95263 885 aa17.06■□□□□ 0.32
PRPF8-202ENST00000571346 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
PRPF8-202ENST00000571346 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
PRPF8-202ENST00000571346 PRKG1Q13976 671 aa17.06■□□□□ 0.32
PRPF8-202ENST00000571346 PUM3Q15397 648 aaKnown RBP17.06■□□□□ 0.32
PRPF8-202ENST00000571346 VGLL2Q8N8G2 317 aa17.06■□□□□ 0.32
PRPF8-202ENST00000571346 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
PRPF8-202ENST00000571346 TTF2Q9UNY4 1162 aaKnown RBP17.06■□□□□ 0.32
PRPF8-202ENST00000571346 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
PRPF8-202ENST00000571346 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
PRPF8-202ENST00000571346 MTMR14Q8NCE2 650 aa17.05■□□□□ 0.32
PRPF8-202ENST00000571346 MEIS3Q99687 375 aa17.05■□□□□ 0.32
PRPF8-202ENST00000571346 AOX1Q06278 1338 aa17.04■□□□□ 0.32
PRPF8-202ENST00000571346 EYA2O00167 538 aa17.04■□□□□ 0.32
PRPF8-202ENST00000571346 RFX5P48382 616 aaPredicted RBP17.04■□□□□ 0.32
PRPF8-202ENST00000571346 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
PRPF8-202ENST00000571346 DEFB129Q9H1M3 183 aa17.04■□□□□ 0.32
PRPF8-202ENST00000571346 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
PRPF8-202ENST00000571346 SSC5DA1L4H1 1573 aa17.03■□□□□ 0.32
PRPF8-202ENST00000571346 IFIT1P09914 478 aaKnown RBP17.03■□□□□ 0.32
PRPF8-202ENST00000571346 SLC5A1P13866 664 aa17.03■□□□□ 0.32
PRPF8-202ENST00000571346 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
PRPF8-202ENST00000571346 MKRN3Q13064 507 aaKnown RBP17.03■□□□□ 0.32
PRPF8-202ENST00000571346 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
PRPF8-202ENST00000571346 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
PRPF8-202ENST00000571346 BCAMP50895 628 aa17.02■□□□□ 0.32
PRPF8-202ENST00000571346 ARMC9Q7Z3E5 817 aa17.02■□□□□ 0.32
PRPF8-202ENST00000571346 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
PRPF8-202ENST00000571346 ANGEL1Q9UNK9 670 aaKnown RBP17.02■□□□□ 0.32
PRPF8-202ENST00000571346 FZD1Q9UP38 647 aa17.02■□□□□ 0.32
PRPF8-202ENST00000571346 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
PRPF8-202ENST00000571346 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.32
PRPF8-202ENST00000571346 CASP8AP2Q9UKL3 1982 aa17.01■□□□□ 0.31
PRPF8-202ENST00000571346 BCAR3O75815 825 aa17.01■□□□□ 0.31
PRPF8-202ENST00000571346 TRIM27P14373 513 aa17.01■□□□□ 0.31
PRPF8-202ENST00000571346 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
PRPF8-202ENST00000571346 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
PRPF8-202ENST00000571346 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
PRPF8-202ENST00000571346 TRPA1O75762 1119 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 FGFR2P21802 821 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 CRKP46108 304 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 GRIK5Q16478 980 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 ATP2B3Q16720 1220 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 LPIN2Q92539 896 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 ARHGAP45Q92619 1136 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 SAGE1Q9NXZ1 904 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 PA2G4Q9UQ80 394 aaKnown RBP17■□□□□ 0.31
PRPF8-202ENST00000571346 TNNQ9UQP3 1299 aa17■□□□□ 0.31
PRPF8-202ENST00000571346 CIAO1O76071 339 aa16.99■□□□□ 0.31
PRPF8-202ENST00000571346 GNAI3P08754 354 aa16.99■□□□□ 0.31
PRPF8-202ENST00000571346 TNFAIP1Q13829 316 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms