RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SASH1O94885 1247 aa16.73■□□□□ 0.27
CCDC40-205ENST00000571028 PCCAP05165 728 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-205ENST00000571028 TRIM27P14373 513 aa16.73■□□□□ 0.27
CCDC40-205ENST00000571028 INHBEP58166 350 aa16.73■□□□□ 0.27
CCDC40-205ENST00000571028 ARHGAP45Q92619 1136 aa16.73■□□□□ 0.27
CCDC40-205ENST00000571028 ERO1AQ96HE7 468 aa16.73■□□□□ 0.27
CCDC40-205ENST00000571028 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-205ENST00000571028 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
CCDC40-205ENST00000571028 SLC10A4Q96EP9 437 aa16.72■□□□□ 0.27
CCDC40-205ENST00000571028 PDE8AO60658 829 aa16.71■□□□□ 0.27
CCDC40-205ENST00000571028 ALDH1L1O75891 902 aa16.71■□□□□ 0.27
CCDC40-205ENST00000571028 FXR1P51114 621 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCDC40-205ENST00000571028 IFNL1Q8IU54 200 aa16.71■□□□□ 0.27
CCDC40-205ENST00000571028 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
CCDC40-205ENST00000571028 CDC5LQ99459 802 aaKnown RBP16.71■□□□□ 0.27
CCDC40-205ENST00000571028 TMEM106CQ9BVX2 250 aa16.71■□□□□ 0.27
CCDC40-205ENST00000571028 MED23Q9ULK4 1368 aa16.7■□□□□ 0.26
CCDC40-205ENST00000571028 H7C1W4 665 aa16.7■□□□□ 0.26
CCDC40-205ENST00000571028 MMP14P50281 582 aa16.7■□□□□ 0.26
CCDC40-205ENST00000571028 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
CCDC40-205ENST00000571028 DACT2Q5SW24 774 aa16.7■□□□□ 0.26
CCDC40-205ENST00000571028 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
CCDC40-205ENST00000571028 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
CCDC40-205ENST00000571028 MXD3Q9BW11 206 aa16.7■□□□□ 0.26
CCDC40-205ENST00000571028 GRM8O00222 908 aa16.69■□□□□ 0.26
CCDC40-205ENST00000571028 ZBTB48P10074 688 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-205ENST00000571028 LDLRAD1Q5T700 205 aa16.69■□□□□ 0.26
CCDC40-205ENST00000571028 STRIP1Q5VSL9 837 aa16.69■□□□□ 0.26
CCDC40-205ENST00000571028 TMEM57Q8N5G2 664 aa16.69■□□□□ 0.26
CCDC40-205ENST00000571028 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
CCDC40-205ENST00000571028 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
CCDC40-205ENST00000571028 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-205ENST00000571028 EN2P19622 333 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-205ENST00000571028 CD99L2Q8TCZ2 262 aa16.68■□□□□ 0.26
CCDC40-205ENST00000571028 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
CCDC40-205ENST00000571028 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-205ENST00000571028 RLBP1P12271 317 aa16.67■□□□□ 0.26
CCDC40-205ENST00000571028 KIAA0825Q8IV33 1275 aa16.67■□□□□ 0.26
CCDC40-205ENST00000571028 ITPRIPQ8IWB1 547 aa16.67■□□□□ 0.26
CCDC40-205ENST00000571028 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-205ENST00000571028 ARMC5Q96C12 935 aa16.67■□□□□ 0.26
CCDC40-205ENST00000571028 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
CCDC40-205ENST00000571028 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
CCDC40-205ENST00000571028 SUCLG2Q96I99 432 aa16.66■□□□□ 0.26
CCDC40-205ENST00000571028 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
CCDC40-205ENST00000571028 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
CCDC40-205ENST00000571028 FZD1Q9UP38 647 aa16.66■□□□□ 0.26
CCDC40-205ENST00000571028 COLQQ9Y215 455 aaPredicted RBP16.66■□□□□ 0.26
CCDC40-205ENST00000571028 COL1A1P02452 1464 aaPredicted RBP16.66■□□□□ 0.26
CCDC40-205ENST00000571028 MKI67P46013 3256 aaKnown RBP16.65■□□□□ 0.26
CCDC40-205ENST00000571028 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC40-205ENST00000571028 CASP7P55210 303 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 CTSWP56202 376 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 SP3Q02447 781 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 CRHR2Q13324 411 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 SLC4A8Q2Y0W8 1093 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 NBPF11Q86T75 865 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 DEFB129Q9H1M3 183 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 PSME4Q14997 1843 aa16.65■□□□□ 0.26
CCDC40-205ENST00000571028 MYO1BO43795 1136 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-205ENST00000571028 DLGAP5Q15398 846 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 EPHA10Q5JZY3 1008 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 CLMNQ96JQ2 1002 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 MEIS3Q99687 375 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 BSDC1Q9NW68 430 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-205ENST00000571028 MINPP1Q9UNW1 487 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 COG6Q9Y2V7 657 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 PPP2R3BQ9Y5P8 575 aa16.64■□□□□ 0.25
CCDC40-205ENST00000571028 HTTP42858 3142 aa16.63■□□□□ 0.25
CCDC40-205ENST00000571028 MS4A1P11836 297 aa16.63■□□□□ 0.25
CCDC40-205ENST00000571028 IREB2P48200 963 aaKnown RBP16.63■□□□□ 0.25
CCDC40-205ENST00000571028 SUPT20HL1Q3ZLR7 823 aa16.63■□□□□ 0.25
CCDC40-205ENST00000571028 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-205ENST00000571028 UNCXA6NJT0 531 aa16.62■□□□□ 0.25
CCDC40-205ENST00000571028 KCNJ4P48050 445 aa16.62■□□□□ 0.25
CCDC40-205ENST00000571028 GTF2IP78347 998 aa16.62■□□□□ 0.25
CCDC40-205ENST00000571028 MAP3K11Q16584 847 aa16.62■□□□□ 0.25
CCDC40-205ENST00000571028 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
CCDC40-205ENST00000571028 TTLL11Q8NHH1 800 aa16.62■□□□□ 0.25
CCDC40-205ENST00000571028 LEMD3Q9Y2U8 911 aa16.62■□□□□ 0.25
CCDC40-205ENST00000571028 IGHMBP2P38935 993 aaKnown RBP16.61■□□□□ 0.25
CCDC40-205ENST00000571028 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
CCDC40-205ENST00000571028 FOXO4P98177 505 aa16.61■□□□□ 0.25
CCDC40-205ENST00000571028 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
CCDC40-205ENST00000571028 GREM2Q9H772 168 aa16.61■□□□□ 0.25
CCDC40-205ENST00000571028 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
CCDC40-205ENST00000571028 GNAI3P08754 354 aa16.6■□□□□ 0.25
CCDC40-205ENST00000571028 PLA2G12BQ9BX93 195 aa16.6■□□□□ 0.25
CCDC40-205ENST00000571028 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
CCDC40-205ENST00000571028 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
CCDC40-205ENST00000571028 LRRFIP2Q9Y608 721 aaKnown RBP16.6■□□□□ 0.25
CCDC40-205ENST00000571028 ZNF804BA4D1E1 1349 aa16.6■□□□□ 0.25
CCDC40-205ENST00000571028 UTYO14607 1347 aa16.6■□□□□ 0.25
CCDC40-205ENST00000571028 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
CCDC40-205ENST00000571028 WDHD1O75717 1129 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms