RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 DDX49Q9Y6V7 483 aaKnown RBP23.32■■□□□ 1.32
SPNS2-203ENST00000570979 FSD2A1L4K1 749 aa23.31■■□□□ 1.32
SPNS2-203ENST00000570979 RRAGCQ9HB90 399 aa23.31■■□□□ 1.32
SPNS2-203ENST00000570979 ATP6V1DQ9Y5K8 247 aa23.31■■□□□ 1.32
SPNS2-203ENST00000570979 AK2P54819 239 aa23.3■■□□□ 1.32
SPNS2-203ENST00000570979 TAOK3Q9H2K8 898 aa23.3■■□□□ 1.32
SPNS2-203ENST00000570979 LTBP3Q9NS15 1303 aa23.3■■□□□ 1.32
SPNS2-203ENST00000570979 DICER1Q9UPY3 1922 aaKnown RBP23.3■■□□□ 1.32
SPNS2-203ENST00000570979 MCTP1Q6DN14 999 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 SH3TC1Q8TE82 1336 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 ZC3H4Q9UPT8 1303 aaKnown RBP23.29■■□□□ 1.32
SPNS2-203ENST00000570979 RIC1Q4ADV7 1423 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 ANKRD36CQ5JPF3 1778 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 A0A0D9SFI3 127 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 SLC27A2O14975 620 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 PARP10Q53GL7 1025 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 SLC51AQ86UW1 340 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 DNAJC2Q99543 621 aaKnown RBP23.29■■□□□ 1.32
SPNS2-203ENST00000570979 PAG1Q9NWQ8 432 aa23.29■■□□□ 1.32
SPNS2-203ENST00000570979 CEP350Q5VT06 3117 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 TAF5LO75529 589 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 MBD3O95983 291 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 BLOC1S2Q6QNY1 142 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 NLRP10Q86W26 655 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 SYNE4Q8N205 404 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 SMC3Q9UQE7 1217 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 ZNF609O15014 1411 aa23.28■■□□□ 1.32
SPNS2-203ENST00000570979 GLTPD2A6NH11 291 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 TOMM70O94826 608 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 ZFYP08048 801 aaPredicted RBP23.27■■□□□ 1.32
SPNS2-203ENST00000570979 CCDC93Q567U6 631 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 GORABQ5T7V8 394 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 SOGA3Q5TF21 947 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 CHMP4CQ96CF2 233 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 UTP14AQ9BVJ6 771 aaKnown RBP23.27■■□□□ 1.32
SPNS2-203ENST00000570979 GZF1Q9H116 711 aaPredicted RBP23.27■■□□□ 1.32
SPNS2-203ENST00000570979 A0A1B0GUL7 405 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 HMGB1P09429 215 aaKnown RBP23.27■■□□□ 1.32
SPNS2-203ENST00000570979 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
SPNS2-203ENST00000570979 ALDH1B1P30837 517 aa23.27■■□□□ 1.32
SPNS2-203ENST00000570979 RPAP1Q9BWH6 1393 aaPredicted RBP23.27■■□□□ 1.32
SPNS2-203ENST00000570979 ANKRD18BA2A2Z9 1011 aa23.26■■□□□ 1.31
SPNS2-203ENST00000570979 NCLP19338 710 aaKnown RBP23.26■■□□□ 1.31
SPNS2-203ENST00000570979 ZDHHC9Q9Y397 364 aa23.26■■□□□ 1.31
SPNS2-203ENST00000570979 PDE8AO60658 829 aa23.25■■□□□ 1.31
SPNS2-203ENST00000570979 HSPA6P17066 643 aa23.25■■□□□ 1.31
SPNS2-203ENST00000570979 HOXA10P31260 410 aaPredicted RBP23.25■■□□□ 1.31
SPNS2-203ENST00000570979 NOL8Q76FK4 1167 aaKnown RBP23.24■■□□□ 1.31
SPNS2-203ENST00000570979 RPGRQ92834 1020 aaKnown RBP23.24■■□□□ 1.31
SPNS2-203ENST00000570979 DSCC1Q9BVC3 393 aa23.24■■□□□ 1.31
SPNS2-203ENST00000570979 LMBRD1Q9NUN5 540 aa23.24■■□□□ 1.31
SPNS2-203ENST00000570979 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
SPNS2-203ENST00000570979 CSPP1Q1MSJ5 1256 aa23.24■■□□□ 1.31
SPNS2-203ENST00000570979 LRRC24Q50LG9 513 aa23.24■■□□□ 1.31
SPNS2-203ENST00000570979 SLC10A5Q5PT55 438 aa23.24■■□□□ 1.31
SPNS2-203ENST00000570979 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
SPNS2-203ENST00000570979 ZNF277Q9NRM2 450 aaPredicted RBP23.24■■□□□ 1.31
SPNS2-203ENST00000570979 PDCP20941 246 aa23.23■■□□□ 1.31
SPNS2-203ENST00000570979 TIMM10P62072 90 aa23.23■■□□□ 1.31
SPNS2-203ENST00000570979 FKBP4Q02790 459 aaKnown RBP eCLIP23.23■■□□□ 1.31
SPNS2-203ENST00000570979 TTC39AQ5SRH9 613 aa23.23■■□□□ 1.31
SPNS2-203ENST00000570979 TRMT112Q9UI30 125 aaKnown RBP23.23■■□□□ 1.31
SPNS2-203ENST00000570979 HCLS1P14317 486 aaPredicted RBP23.22■■□□□ 1.31
SPNS2-203ENST00000570979 RPS6KB1P23443 525 aa23.22■■□□□ 1.31
SPNS2-203ENST00000570979 CTSWP56202 376 aa23.22■■□□□ 1.31
SPNS2-203ENST00000570979 ZNF512BQ96KM6 892 aaPredicted RBP23.22■■□□□ 1.31
SPNS2-203ENST00000570979 POTECB2RU33 542 aa23.22■■□□□ 1.31
SPNS2-203ENST00000570979 IRS4O14654 1257 aaPredicted RBP23.22■■□□□ 1.31
SPNS2-203ENST00000570979 RNF113AO15541 343 aaKnown RBP23.22■■□□□ 1.31
SPNS2-203ENST00000570979 PKP1Q13835 747 aa23.22■■□□□ 1.31
SPNS2-203ENST00000570979 TTLL11Q8NHH1 800 aa23.22■■□□□ 1.31
SPNS2-203ENST00000570979 RBM46Q8TBY0 533 aaKnown RBP23.22■■□□□ 1.31
SPNS2-203ENST00000570979 SYAP1Q96A49 352 aaPredicted RBP23.22■■□□□ 1.31
SPNS2-203ENST00000570979 LAMB2P55268 1798 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 GOLIM4O00461 696 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 ADCK5Q3MIX3 580 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 ZMYM1Q5SVZ6 1142 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 ZSCAN25Q6NSZ9 544 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 RTKN2Q8IZC4 609 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 ZNF594Q96JF6 807 aaPredicted RBP23.21■■□□□ 1.31
SPNS2-203ENST00000570979 NLRP3Q96P20 1036 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
SPNS2-203ENST00000570979 LDHAL6AQ6ZMR3 332 aa23.2■■□□□ 1.3
SPNS2-203ENST00000570979 DDX46Q7L014 1031 aaKnown RBP23.2■■□□□ 1.3
SPNS2-203ENST00000570979 RBM17Q96I25 401 aaKnown RBP23.2■■□□□ 1.3
SPNS2-203ENST00000570979 PRPF40AO75400 957 aaKnown RBP23.19■■□□□ 1.3
SPNS2-203ENST00000570979 NEK1Q96PY6 1258 aa23.19■■□□□ 1.3
SPNS2-203ENST00000570979 CTNNA3Q9UI47 895 aa23.19■■□□□ 1.3
SPNS2-203ENST00000570979 STX6O43752 255 aa23.19■■□□□ 1.3
SPNS2-203ENST00000570979 TTF1Q15361 905 aaPredicted RBP23.19■■□□□ 1.3
SPNS2-203ENST00000570979 METTL24Q5JXM2 366 aa23.19■■□□□ 1.3
SPNS2-203ENST00000570979 ZNF589Q86UQ0 364 aaPredicted RBP23.19■■□□□ 1.3
SPNS2-203ENST00000570979 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
SPNS2-203ENST00000570979 MYH3P11055 1940 aa23.18■■□□□ 1.3
SPNS2-203ENST00000570979 DDNO94850 711 aaPredicted RBP23.18■■□□□ 1.3
SPNS2-203ENST00000570979 ZSCAN22P10073 491 aaPredicted RBP23.18■■□□□ 1.3
SPNS2-203ENST00000570979 VEGFAP15692 232 aaPredicted RBP23.18■■□□□ 1.3
SPNS2-203ENST00000570979 ITGA6P23229 1130 aa23.18■■□□□ 1.3
SPNS2-203ENST00000570979 DPY19L2Q6NUT2 758 aa23.18■■□□□ 1.3
SPNS2-203ENST00000570979 XAGE2Q96GT9 111 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms