RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
SMG6-206ENST00000570668 TRPM7Q96QT4 1865 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 PNMA6EA0A0J9YXQ4 647 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 SLC5A1P13866 664 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 SCARF1Q14162 830 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 CST9Q5W186 159 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 KRT26Q7Z3Y9 468 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 USP48Q86UV5 1035 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 VPS37DQ86XT2 251 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 GGA3Q9NZ52 723 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 HDAC9Q9UKV0 1011 aa13.85□□□□□ -0.19
SMG6-206ENST00000570668 ASTN2O75129 1339 aaPredicted RBP13.85□□□□□ -0.19
SMG6-206ENST00000570668 WNT10BO00744 389 aa13.84□□□□□ -0.19
SMG6-206ENST00000570668 BCAMP50895 628 aa13.84□□□□□ -0.19
SMG6-206ENST00000570668 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
SMG6-206ENST00000570668 JAG2Q9Y219 1238 aa13.84□□□□□ -0.19
SMG6-206ENST00000570668 PITPNM2Q9BZ72 1349 aa13.84□□□□□ -0.19
SMG6-206ENST00000570668 CNTNAP1P78357 1384 aa13.83□□□□□ -0.19
SMG6-206ENST00000570668 RASSF10A6NK89 507 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 ATP8B2P98198 1209 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 POLA2Q14181 598 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 ATP2B3Q16720 1220 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 NBPF9Q3BBW0 867 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 MFSD14BQ5SR56 506 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
SMG6-206ENST00000570668 SULF1Q8IWU6 871 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 SSH3Q8TE77 659 aa13.83□□□□□ -0.2
SMG6-206ENST00000570668 ZBED3Q96IU2 234 aaPredicted RBP13.83□□□□□ -0.2
SMG6-206ENST00000570668 MKRN1Q9UHC7 482 aaKnown RBP13.83□□□□□ -0.2
SMG6-206ENST00000570668 ADM5C9JUS6 153 aa13.82□□□□□ -0.2
SMG6-206ENST00000570668 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
SMG6-206ENST00000570668 MTMR14Q8NCE2 650 aa13.82□□□□□ -0.2
SMG6-206ENST00000570668 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
SMG6-206ENST00000570668 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
SMG6-206ENST00000570668 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
SMG6-206ENST00000570668 F8W031 263 aaPredicted RBP13.81□□□□□ -0.2
SMG6-206ENST00000570668 ZBTB22O15209 634 aa13.81□□□□□ -0.2
SMG6-206ENST00000570668 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
SMG6-206ENST00000570668 MVPQ14764 893 aaKnown RBP13.81□□□□□ -0.2
SMG6-206ENST00000570668 DLK2Q6UY11 383 aa13.81□□□□□ -0.2
SMG6-206ENST00000570668 ABT1Q9ULW3 272 aaKnown RBP13.81□□□□□ -0.2
SMG6-206ENST00000570668 TLL2Q9Y6L7 1015 aa13.81□□□□□ -0.2
SMG6-206ENST00000570668 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
SMG6-206ENST00000570668 TFCP2Q12800 502 aa13.8□□□□□ -0.2
SMG6-206ENST00000570668 CHAF1AQ13111 956 aaPredicted RBP13.8□□□□□ -0.2
SMG6-206ENST00000570668 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMG6-206ENST00000570668 DLGAP5Q15398 846 aa13.8□□□□□ -0.2
SMG6-206ENST00000570668 DEFB115Q30KQ5 88 aa13.8□□□□□ -0.2
SMG6-206ENST00000570668 SAPCD2Q86UD0 394 aa13.8□□□□□ -0.2
SMG6-206ENST00000570668 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
SMG6-206ENST00000570668 TTF2Q9UNY4 1162 aaKnown RBP13.8□□□□□ -0.2
SMG6-206ENST00000570668 AKAP2Q9Y2D5 859 aa13.8□□□□□ -0.2
SMG6-206ENST00000570668 ARAP2Q8WZ64 1704 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 A0A1B0GUL7 405 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 VEGFBP49765 207 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 TIMM10P62072 90 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 CFAP100Q494V2 611 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 CEP85Q6P2H3 762 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.79□□□□□ -0.2
SMG6-206ENST00000570668 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 ZNF408Q9H9D4 720 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 GNL3LQ9NVN8 582 aaKnown RBP13.79□□□□□ -0.2
SMG6-206ENST00000570668 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 SUGT1Q9Y2Z0 365 aa13.79□□□□□ -0.2
SMG6-206ENST00000570668 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.79□□□□□ -0.2
SMG6-206ENST00000570668 SEMA3EO15041 775 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 ADORA1P30542 326 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 PHKA1P46020 1223 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
SMG6-206ENST00000570668 GRIK5Q16478 980 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 CCDC102BQ68D86 513 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 APOBEC3FQ8IUX4 373 aaKnown RBP13.78□□□□□ -0.2
SMG6-206ENST00000570668 WDR66Q8TBY9 1149 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 HHIPL1Q96JK4 782 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
SMG6-206ENST00000570668 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
SMG6-206ENST00000570668 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
SMG6-206ENST00000570668 SURF6O75683 361 aaKnown RBP13.77□□□□□ -0.21
SMG6-206ENST00000570668 COL1A1P02452 1464 aaPredicted RBP13.77□□□□□ -0.21
SMG6-206ENST00000570668 XAGE2Q96GT9 111 aa13.77□□□□□ -0.21
SMG6-206ENST00000570668 MRIQ9BWK5 157 aa13.77□□□□□ -0.21
SMG6-206ENST00000570668 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
SMG6-206ENST00000570668 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
SMG6-206ENST00000570668 GPR108Q9NPR9 543 aa13.77□□□□□ -0.21
SMG6-206ENST00000570668 SCAF8Q9UPN6 1271 aaKnown RBP13.77□□□□□ -0.21
SMG6-206ENST00000570668 MYH13Q9UKX3 1938 aa13.76□□□□□ -0.21
SMG6-206ENST00000570668 WDR33Q9C0J8 1336 aaKnown RBP13.76□□□□□ -0.21
SMG6-206ENST00000570668 MYO1BO43795 1136 aa13.76□□□□□ -0.21
SMG6-206ENST00000570668 ECE1P42892 770 aa13.76□□□□□ -0.21
SMG6-206ENST00000570668 CRKP46108 304 aa13.76□□□□□ -0.21
SMG6-206ENST00000570668 RBM5P52756 815 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMG6-206ENST00000570668 C20orf194Q5TEA3 1177 aa13.76□□□□□ -0.21
SMG6-206ENST00000570668 C2orf69Q8N8R5 385 aa13.76□□□□□ -0.21
SMG6-206ENST00000570668 YTHDC1Q96MU7 727 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms